MGE detailed information
MGE type: Prophage MGE length: 55352 bp
Accession: NZ_CP112873 Location: 2649557..2704908 Organism: Bacillus subtilis strain O4 Replicon: chromosome
Accession: NZ_CP112873 Location: 2649557..2704908 Organism: Bacillus subtilis strain O4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ORF34_RS13895 (2644645) | 2644645..2645001 | - | 357 | WP_003229971.1 | ribosome silencing factor | - |
| ORF34_RS13900 (2645019) | 2645019..2645579 | - | 561 | WP_004399059.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| ORF34_RS13905 (2645569) | 2645569..2646138 | - | 570 | WP_004398676.1 | nicotinate-nucleotide adenylyltransferase | - |
| ORF34_RS13910 (2646150) | 2646150..2646440 | - | 291 | WP_003226133.1 | ribosome assembly RNA-binding protein YhbY | - |
| ORF34_RS13915 (2646434) | 2646434..2647276 | - | 843 | WP_003229967.1 | shikimate dehydrogenase | - |
| ORF34_RS13920 (2647294) | 2647294..2648394 | - | 1101 | WP_003229966.1 | ribosome biogenesis GTPase YqeH | - |
| ORF34_RS13925 (2648398) | 2648398..2648916 | - | 519 | WP_003226126.1 | YqeG family HAD IIIA-type phosphatase | - |
| ORF34_RS13930 (2649278) | 2649278..2649418 | + | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| ORF34_RS13935 (2649724) | 2649724..2650455 | - | 732 | WP_003229964.1 | GDSL-type esterase/lipase family protein | - |
| ORF34_RS13940 (2650707) | 2650707..2651459 | - | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| ORF34_RS13945 (2651646) | 2651646..2652272 | + | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| ORF34_RS13950 (2652291) | 2652291..2653184 | - | 894 | WP_003229961.1 | 2-hydroxy-3-oxopropionate reductase | VF |
| ORF34_RS13955 (2653436) | 2653436..2654158 | + | 723 | WP_010886572.1 | hypothetical protein | - |
| ORF34_RS13960 (2654191) | 2654191..2654601 | - | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | - |
| ORF34_RS13965 (2654797) | 2654797..2655144 | + | 348 | Protein_2704 | sigma-70 family RNA polymerase sigma factor | - |
| ORF34_RS13970 (2655175) | 2655175..2656635 | - | 1461 | WP_223257626.1 | hypothetical protein ; Integrase | Integrase |
| ORF34_RS13975 (2656593) | 2656593..2656771 | - | 179 | Protein_2706 | hypothetical protein | - |
| ORF34_RS13980 (2657126) | 2657126..2657545 | - | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| ORF34_RS13985 (2657557) | 2657557..2658597 | - | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| ORF34_RS13990 (2658620) | 2658620..2659060 | - | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| ORF34_RS13995 (2659121) | 2659121..2659438 | - | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| ORF34_RS14000 (2659810) | 2659810..2660574 | - | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| ORF34_RS14005 (2661017) | 2661017..2662144 | + | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| ORF34_RS14010 (2662134) | 2662134..2662268 | + | 135 | WP_004398770.1 | phosphatase RapE inhibitor PhrE | - |
| ORF34_RS14015 (2662378) | 2662378..2662536 | + | 159 | WP_003245945.1 | hypothetical protein | - |
| ORF34_RS14020 (2662906) | 2662906..2664501 | + | 1596 | WP_004399034.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| ORF34_RS14025 (2664516) | 2664516..2665094 | + | 579 | WP_009967790.1 | type VII secretion system immunity protein YqcF | - |
| ORF34_RS14030 (2665212) | 2665212..2665358 | + | 147 | WP_009967791.1 | hypothetical protein | - |
| ORF34_RS14035 (2665355) | 2665355..2665717 | - | 363 | WP_003229947.1 | hypothetical protein | - |
| ORF34_RS14040 (2665733) | 2665733..2666212 | - | 480 | WP_004399085.1 | hypothetical protein | - |
| ORF34_RS14045 (2666377) | 2666377..2667195 | - | 819 | WP_003229946.1 | hypothetical protein | VF |
| ORF34_RS14050 (2667240) | 2667240..2667662 | - | 423 | WP_003246208.1 | holin family protein | - |
| ORF34_RS14055 (2667707) | 2667707..2668600 | - | 894 | WP_003246010.1 | hypothetical protein | - |
| ORF34_RS14060 (2668688) | 2668688..2668852 | - | 165 | WP_003229944.1 | XkdX family protein | - |
| ORF34_RS14065 (2668849) | 2668849..2669184 | - | 336 | WP_009967793.1 | XkdW family protein | - |
| ORF34_RS14070 (2669194) | 2669194..2670294 | - | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| ORF34_RS14075 (2670297) | 2670297..2670569 | - | 273 | WP_003229942.1 | hypothetical protein | - |
| ORF34_RS14080 (2670566) | 2670566..2671144 | - | 579 | WP_003229941.1 | YmfQ family protein | - |
| ORF34_RS14085 (2671128) | 2671128..2672174 | - | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| ORF34_RS14090 (2672167) | 2672167..2672592 | - | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| ORF34_RS14095 (2672605) | 2672605..2672868 | - | 264 | WP_003229938.1 | DUF2577 family protein | - |
| ORF34_RS14100 (2672865) | 2672865..2673845 | - | 981 | WP_004398524.1 | hypothetical protein | - |
| ORF34_RS14105 (2673858) | 2673858..2674517 | - | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| ORF34_RS14110 (2674510) | 2674510..2679267 | - | 4758 | WP_003246092.1 | transglycosylase SLT domain-containing protein | - |
| ORF34_RS14115 (2679270) | 2679270..2679407 | - | 138 | WP_003229934.1 | hypothetical protein | - |
| ORF34_RS14120 (2679449) | 2679449..2679898 | - | 450 | WP_003229933.1 | phage portal protein | - |
| ORF34_RS14125 (2680044) | 2680044..2680223 | + | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | Toxin Detail |
| - (2680147) | 2680147..2680369 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2680147) | 2680147..2680369 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2680147) | 2680147..2680369 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| - (2680147) | 2680147..2680369 | - | 223 | NuclAT_0 | - | Antitoxin Detail |
| ORF34_RS14130 (2680603) | 2680603..2680692 | + | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| ORF34_RS14135 (2680946) | 2680946..2681389 | - | 444 | WP_003229930.1 | phage tail tube protein | - |
| ORF34_RS14140 (2681392) | 2681392..2682792 | - | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| ORF34_RS14145 (2682793) | 2682793..2682984 | - | 192 | WP_010886574.1 | hypothetical protein | - |
| ORF34_RS14150 (2682981) | 2682981..2683418 | - | 438 | WP_003229927.1 | hypothetical protein | - |
| ORF34_RS14155 (2683431) | 2683431..2683934 | - | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| ORF34_RS14160 (2683931) | 2683931..2684293 | - | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| ORF34_RS14165 (2684290) | 2684290..2684685 | - | 396 | WP_004398566.1 | DUF3199 family protein | - |
| ORF34_RS14170 (2684689) | 2684689..2685000 | - | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| ORF34_RS14175 (2685011) | 2685011..2685946 | - | 936 | WP_003229922.1 | phage major capsid protein | - |
| ORF34_RS14180 (2685965) | 2685965..2686933 | - | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| ORF34_RS14185 (2686966) | 2686966..2687619 | - | 654 | WP_003229920.1 | hypothetical protein | - |
| ORF34_RS14190 (2687660) | 2687660..2688577 | - | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| ORF34_RS14195 (2688574) | 2688574..2690106 | - | 1533 | WP_004398894.1 | phage portal protein | - |
| ORF34_RS14200 (2690110) | 2690110..2691405 | - | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| ORF34_RS14205 (2691398) | 2691398..2692117 | - | 720 | WP_003229916.1 | phage terminase small subunit | - |
| ORF34_RS14210 (2692185) | 2692185..2692649 | - | 465 | WP_004398685.1 | hypothetical protein | - |
| ORF34_RS14215 (2692793) | 2692793..2693248 | - | 456 | WP_004398775.1 | hypothetical protein | - |
| ORF34_RS14220 (2693446) | 2693446..2694375 | + | 930 | WP_003229913.1 | hypothetical protein | - |
| ORF34_RS14225 (2694449) | 2694449..2694655 | - | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| ORF34_RS14230 (2694737) | 2694737..2695165 | - | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ORF34_RS14235 (2695261) | 2695261..2695410 | - | 150 | WP_003229910.1 | hypothetical protein | - |
| ORF34_RS14240 (2695401) | 2695401..2696342 | - | 942 | WP_075058863.1 | ATP-binding protein | - |
| ORF34_RS14245 (2696224) | 2696224..2696901 | - | 678 | WP_010886575.1 | DnaD domain protein | - |
| ORF34_RS14250 (2696977) | 2696977..2697831 | - | 855 | WP_003229907.1 | recombinase RecT | - |
| ORF34_RS14255 (2697834) | 2697834..2698793 | - | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| ORF34_RS14260 (2698899) | 2698899..2699093 | - | 195 | WP_003229905.1 | hypothetical protein | - |
| ORF34_RS14265 (2699053) | 2699053..2699226 | - | 174 | WP_119123069.1 | hypothetical protein | - |
| ORF34_RS14270 (2699223) | 2699223..2699480 | - | 258 | WP_003245994.1 | YqaH family protein | - |
| ORF34_RS14275 (2699477) | 2699477..2700046 | - | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| ORF34_RS14280 (2700120) | 2700120..2700260 | - | 141 | WP_003229902.1 | hypothetical protein | - |
| ORF34_RS14285 (2700290) | 2700290..2700520 | - | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| ORF34_RS14290 (2700697) | 2700697..2701047 | + | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| ORF34_RS14295 (2701314) | 2701314..2701481 | - | 168 | WP_003229900.1 | hypothetical protein | - |
| ORF34_RS14300 (2701837) | 2701837..2702373 | - | 537 | WP_004399117.1 | AAA family ATPase | - |
| ORF34_RS14305 (2702642) | 2702642..2703160 | + | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ORF34_RS14310 (2703166) | 2703166..2703558 | + | 393 | Protein_2773 | sigma-70 family RNA polymerase sigma factor | - |
| ORF34_RS14315 (2703558) | 2703558..2703674 | + | 117 | WP_003229898.1 | hypothetical protein | - |
| ORF34_RS14320 (2703640) | 2703640..2703840 | - | 201 | Protein_2775 | recombinase family protein | - |
| ORF34_RS14325 (2703783) | 2703783..2703947 | - | 165 | WP_010886576.1 | hypothetical protein | - |
| ORF34_RS14330 (2704492) | 2704492..2704908 | - | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
| ORF34_RS14335 (2704954) | 2704954..2706252 | - | 1299 | WP_003246194.1 | two-component system sensor histidine kinase YrkQ | - |
| ORF34_RS14340 (2706239) | 2706239..2706934 | - | 696 | WP_003229895.1 | two-component response regulator YrkP | - |
| ORF34_RS14345 (2707202) | 2707202..2708419 | + | 1218 | WP_003229894.1 | DUF418 domain-containing protein | - |
| ORF34_RS14350 (2708338) | 2708338..2708586 | + | 249 | WP_119123070.1 | hypothetical protein | - |
| ORF34_RS14355 (2708931) | 2708931..2709488 | + | 558 | WP_003229892.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | Prophage | TA6322, TA10201, TA20260 | NC_000964 | 2645490..2699243 | 0.003 |