MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP110201 Location: 3691447..3705420 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Replicon: chromosome
Accession: NZ_CP110201 Location: 3691447..3705420 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-65 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCK73_RS18155 () | 3687018..3689462 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| OCK73_RS18160 () | 3689571..3690338 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| OCK73_RS18165 () | 3690709..3691116 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| OCK73_RS18170 () | 3691447..3692166 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| OCK73_RS18175 () | 3692170..3692385 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| OCK73_RS18180 () | 3692502..3693449 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| OCK73_RS18185 () | 3693941..3694181 | - | 241 | Protein_3556 | PerC family transcriptional regulator | - |
| OCK73_RS18190 () | 3694264..3695085 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| OCK73_RS18195 () | 3695491..3695961 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| OCK73_RS18200 () | 3695983..3698493 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| OCK73_RS18205 () | 3698517..3699254 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| OCK73_RS18210 () | 3699338..3699850 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| OCK73_RS18215 () | 3700600..3701304 | - | 705 | Protein_3562 | integrase core domain-containing protein | - |
| OCK73_RS18220 () | 3701357..3701605 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| OCK73_RS18225 () | 3701707..3702015 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| OCK73_RS18230 () | 3702098..3702214 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3702299..3702721 | - | 423 | - | - | Antitoxin Detail |
| OCK73_RS18235 () | 3702456..3702731 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| OCK73_RS18240 () | 3702784..3703221 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| OCK73_RS18245 () | 3703784..3704230 | - | 447 | WP_000935097.1 | protein SciX | - |
| OCK73_RS18250 () | 3704224..3705093 | - | 870 | Protein_3569 | hypothetical protein | VF |
| OCK73_RS18255 () | 3705157..3705420 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| OCK73_RS18260 () | 3705414..3709508 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| OCK73_RS18265 () | 3709527..3709973 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |