MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP110198 Location: 3691063..3705036 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-75 Replicon: chromosome
Accession: NZ_CP110198 Location: 3691063..3705036 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-75 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCK70_RS18140 () | 3686634..3689078 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| OCK70_RS18145 () | 3689187..3689954 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| OCK70_RS18150 () | 3690325..3690732 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| OCK70_RS18155 () | 3691063..3691782 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| OCK70_RS18160 () | 3691786..3692001 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| OCK70_RS18165 () | 3692118..3693065 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| OCK70_RS18170 () | 3693557..3693797 | - | 241 | Protein_3554 | PerC family transcriptional regulator | - |
| OCK70_RS18175 () | 3693880..3694701 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| OCK70_RS18180 () | 3695107..3695577 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| OCK70_RS18185 () | 3695599..3698109 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| OCK70_RS18190 () | 3698133..3698870 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| OCK70_RS18195 () | 3698954..3699466 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| OCK70_RS18200 () | 3700216..3700920 | - | 705 | Protein_3560 | integrase core domain-containing protein | - |
| OCK70_RS18205 () | 3700973..3701221 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| OCK70_RS18210 () | 3701323..3701631 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| OCK70_RS18215 () | 3701714..3701830 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3701915..3702337 | - | 423 | - | - | Antitoxin Detail |
| OCK70_RS18220 () | 3702072..3702347 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| OCK70_RS18225 () | 3702400..3702837 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| OCK70_RS18230 () | 3703400..3703846 | - | 447 | WP_000935097.1 | protein SciX | - |
| OCK70_RS18235 () | 3703840..3704709 | - | 870 | Protein_3567 | hypothetical protein | VF |
| OCK70_RS18240 () | 3704773..3705036 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| OCK70_RS18245 () | 3705030..3709124 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| OCK70_RS18250 () | 3709143..3709589 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |