MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP110017 Location: 1499412..1521086 Organism: Escherichia coli strain HE_50 Replicon: chromosome
Accession: NZ_CP110017 Location: 1499412..1521086 Organism: Escherichia coli strain HE_50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR76_RS07435 (1495401) | 1495401..1495448 | + | 48 | WP_211180494.1 | protein YnaN | - |
| OLR76_RS07440 (1495462) | 1495462..1496445 | + | 984 | WP_282983521.1 | zinc transporter ZntB | - |
| OLR76_RS07445 (1496720) | 1496720..1496893 | + | 174 | WP_001296046.1 | protein YnaL | - |
| OLR76_RS07450 (1496923) | 1496923..1498296 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| OLR76_RS07455 (1498425) | 1498425..1499360 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| OLR76_RS07460 (1499412) | 1499412..1500647 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| OLR76_RS07465 (1500649) | 1500649..1500864 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1500968) | 1500968..1501146 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500968) | 1500968..1501146 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500968) | 1500968..1501146 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500968) | 1500968..1501146 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| OLR76_RS07470 (1500943) | 1500943..1501152 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| OLR76_RS07475 (1501145) | 1501145..1501339 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| OLR76_RS07480 (1501396) | 1501396..1502205 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| OLR76_RS07485 (1502198) | 1502198..1504798 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| OLR76_RS07490 (1504900) | 1504900..1505175 | - | 276 | WP_000632297.1 | protein RacC | - |
| OLR76_RS07495 (1505250) | 1505250..1505420 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| OLR76_RS07500 (1505420) | 1505420..1505641 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| OLR76_RS07505 (1506083) | 1506083..1506571 | + | 489 | WP_282983603.1 | superinfection exclusion B family protein | - |
| OLR76_RS07510 (1506568) | 1506568..1506723 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| OLR76_RS07515 (1506734) | 1506734..1506868 | - | 135 | WP_000233809.1 | phage protein | - |
| OLR76_RS07520 (1507177) | 1507177..1507653 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| OLR76_RS07525 (1507777) | 1507777..1508073 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| OLR76_RS07530 (1508096) | 1508096..1508518 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| OLR76_RS07535 (1508531) | 1508531..1509388 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| OLR76_RS07540 (1509395) | 1509395..1510141 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| OLR76_RS07545 (1510164) | 1510164..1510616 | + | 453 | Protein_1471 | DUF1627 domain-containing protein | - |
| OLR76_RS07550 (1510812) | 1510812..1510997 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| OLR76_RS07555 (1511194) | 1511194..1512651 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| OLR76_RS07560 (1512789) | 1512789..1513052 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| OLR76_RS07565 (1513033) | 1513033..1513392 | + | 360 | WP_000091628.1 | protein YdaY | - |
| OLR76_RS07570 (1513866) | 1513866..1514798 | + | 933 | Protein_1476 | phage tail length tape measure family protein | - |
| OLR76_RS07575 (1514801) | 1514801..1515016 | + | 216 | Protein_1477 | Ail/Lom family outer membrane beta-barrel protein | - |
| OLR76_RS07580 (1515158) | 1515158..1516138 | - | 981 | WP_000019451.1 | IS5 family transposase ISKpn26 | Transposase |
| OLR76_RS07585 (1516208) | 1516208..1516396 | + | 189 | Protein_1479 | Ail/Lom family outer membrane beta-barrel protein | - |
| OLR76_RS07590 (1516461) | 1516461..1519823 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| OLR76_RS07595 (1519823) | 1519823..1520398 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| OLR76_RS07600 (1520496) | 1520496..1521086 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OLR76_RS07605 (1521403) | 1521403..1521636 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| OLR76_RS07610 (1521827) | 1521827..1522807 | + | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| OLR76_RS07615 (1522940) | 1522940..1523017 | - | 78 | Protein_1485 | hypothetical protein | - |
| OLR76_RS07620 (1523796) | 1523796..1524230 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| OLR76_RS07625 (1524371) | 1524371..1525504 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |