MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP110016 Location: 1499413..1521087 Organism: Escherichia coli strain HE_100 Replicon: chromosome
Accession: NZ_CP110016 Location: 1499413..1521087 Organism: Escherichia coli strain HE_100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR74_RS07440 (1495402) | 1495402..1495449 | + | 48 | WP_211180494.1 | protein YnaN | - |
| OLR74_RS07445 (1495463) | 1495463..1496446 | + | 984 | WP_282983521.1 | zinc transporter ZntB | - |
| OLR74_RS07450 (1496721) | 1496721..1496894 | + | 174 | WP_001296046.1 | protein YnaL | - |
| OLR74_RS07455 (1496924) | 1496924..1498297 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| OLR74_RS07460 (1498426) | 1498426..1499361 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| OLR74_RS07465 (1499413) | 1499413..1500648 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| OLR74_RS07470 (1500650) | 1500650..1500865 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1500969) | 1500969..1501147 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500969) | 1500969..1501147 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500969) | 1500969..1501147 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500969) | 1500969..1501147 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| OLR74_RS07475 (1500944) | 1500944..1501153 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| OLR74_RS07480 (1501146) | 1501146..1501340 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| OLR74_RS07485 (1501397) | 1501397..1502206 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| OLR74_RS07490 (1502199) | 1502199..1504799 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| OLR74_RS07495 (1504901) | 1504901..1505176 | - | 276 | WP_000632297.1 | protein RacC | - |
| OLR74_RS07500 (1505251) | 1505251..1505421 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| OLR74_RS07505 (1505421) | 1505421..1505642 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| OLR74_RS07510 (1506084) | 1506084..1506572 | + | 489 | WP_282983603.1 | superinfection exclusion B family protein | - |
| OLR74_RS07515 (1506569) | 1506569..1506724 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| OLR74_RS07520 (1506735) | 1506735..1506869 | - | 135 | WP_000233809.1 | phage protein | - |
| OLR74_RS07525 (1507178) | 1507178..1507654 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| OLR74_RS07530 (1507778) | 1507778..1508074 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| OLR74_RS07535 (1508097) | 1508097..1508519 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| OLR74_RS07540 (1508532) | 1508532..1509389 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| OLR74_RS07545 (1509396) | 1509396..1510142 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| OLR74_RS07550 (1510165) | 1510165..1510617 | + | 453 | Protein_1472 | DUF1627 domain-containing protein | - |
| OLR74_RS07555 (1510813) | 1510813..1510998 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| OLR74_RS07560 (1511195) | 1511195..1512652 | + | 1458 | WP_105076362.1 | Trk system potassium transporter TrkG | - |
| OLR74_RS07565 (1512790) | 1512790..1513053 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| OLR74_RS07570 (1513034) | 1513034..1513393 | + | 360 | WP_000091628.1 | protein YdaY | - |
| OLR74_RS07575 (1513576) | 1513576..1513701 | + | 126 | WP_001635124.1 | hypothetical protein | - |
| OLR74_RS07580 (1513867) | 1513867..1514799 | + | 933 | Protein_1478 | phage tail length tape measure family protein | - |
| OLR74_RS07585 (1514802) | 1514802..1515017 | + | 216 | Protein_1479 | Ail/Lom family outer membrane beta-barrel protein | - |
| OLR74_RS07590 (1515159) | 1515159..1516139 | - | 981 | WP_000019451.1 | IS5 family transposase ISKpn26 | Transposase |
| OLR74_RS07595 (1516209) | 1516209..1516397 | + | 189 | Protein_1481 | Ail/Lom family outer membrane beta-barrel protein | - |
| OLR74_RS07600 (1516462) | 1516462..1519824 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| OLR74_RS07605 (1519824) | 1519824..1520399 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| OLR74_RS07610 (1520497) | 1520497..1521087 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OLR74_RS07615 (1521404) | 1521404..1521637 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| OLR74_RS07620 (1521828) | 1521828..1522808 | + | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| OLR74_RS07625 (1522941) | 1522941..1523018 | - | 78 | Protein_1487 | hypothetical protein | - |
| OLR74_RS07630 (1523797) | 1523797..1524231 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| OLR74_RS07635 (1524372) | 1524372..1525505 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |