MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP110014 Location: 1499409..1521083 Organism: Escherichia coli strain HE_100-10 Replicon: chromosome
Accession: NZ_CP110014 Location: 1499409..1521083 Organism: Escherichia coli strain HE_100-10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR77_RS07440 (1495398) | 1495398..1495445 | + | 48 | WP_211180494.1 | protein YnaN | - |
| OLR77_RS07445 (1495459) | 1495459..1496442 | + | 984 | WP_282983521.1 | zinc transporter ZntB | - |
| OLR77_RS07450 (1496717) | 1496717..1496890 | + | 174 | WP_001296046.1 | protein YnaL | - |
| OLR77_RS07455 (1496920) | 1496920..1498293 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| OLR77_RS07460 (1498422) | 1498422..1499357 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| OLR77_RS07465 (1499409) | 1499409..1500644 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| OLR77_RS07470 (1500646) | 1500646..1500861 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1500965) | 1500965..1501143 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500965) | 1500965..1501143 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500965) | 1500965..1501143 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1500965) | 1500965..1501143 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| OLR77_RS07475 (1500940) | 1500940..1501149 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| OLR77_RS07480 (1501142) | 1501142..1501336 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| OLR77_RS07485 (1501393) | 1501393..1502202 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| OLR77_RS07490 (1502195) | 1502195..1504795 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| OLR77_RS07495 (1504897) | 1504897..1505172 | - | 276 | WP_000632297.1 | protein RacC | - |
| OLR77_RS07500 (1505247) | 1505247..1505417 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| OLR77_RS07505 (1505417) | 1505417..1505638 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| OLR77_RS07510 (1506080) | 1506080..1506568 | + | 489 | WP_282983603.1 | superinfection exclusion B family protein | - |
| OLR77_RS07515 (1506565) | 1506565..1506720 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| OLR77_RS07520 (1506731) | 1506731..1506865 | - | 135 | WP_000233809.1 | phage protein | - |
| OLR77_RS07525 (1507174) | 1507174..1507650 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| OLR77_RS07530 (1507774) | 1507774..1508070 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| OLR77_RS07535 (1508093) | 1508093..1508515 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| OLR77_RS07540 (1508528) | 1508528..1509385 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| OLR77_RS07545 (1509392) | 1509392..1510138 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| OLR77_RS07550 (1510161) | 1510161..1510613 | + | 453 | Protein_1472 | DUF1627 domain-containing protein | - |
| OLR77_RS07555 (1510809) | 1510809..1510994 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| OLR77_RS07560 (1511191) | 1511191..1512648 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| OLR77_RS07565 (1512786) | 1512786..1513049 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| OLR77_RS07570 (1513030) | 1513030..1513389 | + | 360 | WP_000091628.1 | protein YdaY | - |
| OLR77_RS07575 (1513863) | 1513863..1514795 | + | 933 | Protein_1477 | phage tail length tape measure family protein | - |
| OLR77_RS07580 (1514798) | 1514798..1515013 | + | 216 | Protein_1478 | Ail/Lom family outer membrane beta-barrel protein | - |
| OLR77_RS07585 (1515155) | 1515155..1516135 | - | 981 | WP_000019451.1 | IS5 family transposase ISKpn26 | Transposase |
| OLR77_RS07590 (1516205) | 1516205..1516393 | + | 189 | Protein_1480 | Ail/Lom family outer membrane beta-barrel protein | - |
| OLR77_RS07595 (1516458) | 1516458..1519820 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| OLR77_RS07600 (1519820) | 1519820..1520395 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| OLR77_RS07605 (1520493) | 1520493..1521083 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| OLR77_RS07610 (1521400) | 1521400..1521633 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| OLR77_RS07615 (1521824) | 1521824..1522804 | + | 981 | WP_000019403.1 | IS5-like element IS5 family transposase | - |
| OLR77_RS07620 (1522937) | 1522937..1523014 | - | 78 | Protein_1486 | hypothetical protein | - |
| OLR77_RS07625 (1523793) | 1523793..1524227 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| OLR77_RS07630 (1524368) | 1524368..1525501 | - | 1134 | WP_000837921.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |