MGE detailed information
MGE type: Prophage MGE length: 40711 bp
Accession: NZ_CP109890 Location: 1154600..1195310 Organism: Xylella fastidiosa subsp. fastidiosa strain WM1-1 Replicon: chromosome
Accession: NZ_CP109890 Location: 1154600..1195310 Organism: Xylella fastidiosa subsp. fastidiosa strain WM1-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK119_RS04930 (OK119_04930) | 1149887..1150141 | - | 255 | WP_004089715.1 | hypothetical protein | - |
| OK119_RS04935 (OK119_04935) | 1150315..1150590 | - | 276 | WP_228446175.1 | helix-turn-helix domain-containing protein | - |
| OK119_RS04940 (OK119_04940) | 1151373..1151879 | - | 507 | WP_236641888.1 | hypothetical protein | - |
| OK119_RS04945 (OK119_04945) | 1151867..1152238 | - | 372 | WP_236641889.1 | hypothetical protein | - |
| OK119_RS04950 (OK119_04950) | 1152725..1153729 | - | 1005 | WP_128723193.1 | peptidase | - |
| OK119_RS04955 (OK119_04955) | 1153889..1154086 | - | 198 | WP_012382581.1 | hypothetical protein | - |
| OK119_RS04960 (OK119_04960) | 1154600..1155763 | - | 1164 | WP_038232954.1 | tail fiber protein | - |
| OK119_RS04965 (OK119_04965) | 1155767..1156327 | - | 561 | WP_014607744.1 | DUF2612 domain-containing protein | - |
| OK119_RS04970 (OK119_04970) | 1156324..1156524 | - | 201 | WP_236641891.1 | hypothetical protein | - |
| OK119_RS04975 (OK119_04975) | 1156575..1157459 | - | 885 | WP_236641892.1 | baseplate J/gp47 family protein | - |
| OK119_RS04980 (OK119_04980) | 1157558..1157854 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK119_RS04985 (OK119_04985) | 1157858..1158163 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| OK119_RS04990 (OK119_04990) | 1158174..1158527 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| OK119_RS04995 (OK119_04995) | 1158524..1159165 | - | 642 | WP_004090764.1 | Gp138 family membrane-puncturing spike protein | - |
| OK119_RS05000 (OK119_05000) | 1159162..1159992 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| OK119_RS05005 (OK119_05005) | 1159989..1160306 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| OK119_RS05010 (OK119_05010) | 1160306..1161076 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| OK119_RS05015 (OK119_05015) | 1161187..1161414 | + | 228 | WP_004091377.1 | DUF6290 family protein | Antitoxin Detail |
| OK119_RS05020 (OK119_05020) | 1161398..1161664 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK119_RS05025 (OK119_05025) | 1161675..1163468 | - | 1794 | WP_228446142.1 | phage tail tape measure protein | - |
| OK119_RS05030 (OK119_05030) | 1163521..1163685 | - | 165 | WP_162849007.1 | hypothetical protein | - |
| OK119_RS05035 (OK119_05035) | 1163712..1164134 | - | 423 | WP_012382587.1 | putative phage tail assembly chaperone | - |
| OK119_RS05040 (OK119_05040) | 1164131..1164568 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| OK119_RS05045 (OK119_05045) | 1164578..1166074 | - | 1497 | WP_038232978.1 | DUF3383 domain-containing protein | - |
| OK119_RS05050 (OK119_05050) | 1166075..1166608 | - | 534 | WP_004090297.1 | hypothetical protein | - |
| OK119_RS05055 (OK119_05055) | 1166532..1166900 | - | 369 | WP_004090296.1 | hypothetical protein | - |
| OK119_RS05060 (OK119_05060) | 1166887..1167366 | - | 480 | WP_004090295.1 | hypothetical protein | - |
| OK119_RS05065 (OK119_05065) | 1167363..1167731 | - | 369 | WP_004090294.1 | DUF4054 domain-containing protein | - |
| OK119_RS05070 (OK119_05070) | 1167731..1168084 | - | 354 | WP_011097882.1 | hypothetical protein | - |
| OK119_RS05075 (OK119_05075) | 1168148..1169131 | - | 984 | WP_004090291.1 | DUF2184 domain-containing protein | - |
| OK119_RS05080 (OK119_05080) | 1169141..1169623 | - | 483 | WP_004090290.1 | hypothetical protein | - |
| OK119_RS05085 (OK119_05085) | 1169633..1170841 | - | 1209 | WP_004090289.1 | DUF2213 domain-containing protein | - |
| OK119_RS05090 (OK119_05090) | 1170841..1171686 | - | 846 | WP_004090288.1 | phage head morphogenesis protein | - |
| OK119_RS05095 (OK119_05095) | 1171755..1172093 | + | 339 | WP_011097884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OK119_RS05100 (OK119_05100) | 1172090..1172371 | + | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| OK119_RS05105 (OK119_05105) | 1172420..1173808 | - | 1389 | WP_178086806.1 | DUF1073 domain-containing protein | - |
| OK119_RS05110 (OK119_05110) | 1173805..1175355 | - | 1551 | WP_004090279.1 | phage terminase large subunit | - |
| OK119_RS05115 (OK119_05115) | 1175345..1175704 | - | 360 | WP_004090276.1 | hypothetical protein | - |
| OK119_RS05120 (OK119_05120) | 1175796..1175960 | - | 165 | WP_012382595.1 | hypothetical protein | - |
| OK119_RS05125 (OK119_05125) | 1176010..1176471 | - | 462 | WP_011097892.1 | hypothetical protein | - |
| OK119_RS05130 (OK119_05130) | 1176461..1176790 | - | 330 | WP_011097893.1 | phage holin family protein | - |
| OK119_RS05135 (OK119_05135) | 1176783..1177280 | - | 498 | WP_004089579.1 | lysozyme | - |
| OK119_RS05140 (OK119_05140) | 1177484..1177822 | - | 339 | WP_004089578.1 | BrnA antitoxin family protein | - |
| OK119_RS05145 (OK119_05145) | 1177809..1178075 | - | 267 | WP_004089577.1 | BrnT family toxin | - |
| OK119_RS05150 (OK119_05150) | 1178264..1178962 | - | 699 | WP_011097895.1 | hypothetical protein | - |
| OK119_RS05155 (OK119_05155) | 1179091..1179552 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| OK119_RS05160 (OK119_05160) | 1179549..1180238 | - | 690 | WP_011098061.1 | hypothetical protein | - |
| OK119_RS05165 (OK119_05165) | 1180219..1181106 | - | 888 | WP_012382597.1 | YdaU family protein | - |
| OK119_RS05170 (OK119_05170) | 1181103..1181891 | - | 789 | WP_011097897.1 | Bro-N domain-containing protein | - |
| OK119_RS05175 (OK119_05175) | 1181888..1182520 | - | 633 | WP_004088094.1 | Bro-N domain-containing protein | - |
| OK119_RS05180 (OK119_05180) | 1182517..1182780 | - | 264 | WP_228446177.1 | hypothetical protein | - |
| OK119_RS05185 (OK119_05185) | 1182798..1183013 | - | 216 | WP_012382598.1 | hypothetical protein | - |
| OK119_RS05190 (OK119_05190) | 1183043..1183231 | - | 189 | WP_004088102.1 | hypothetical protein | - |
| OK119_RS05195 (OK119_05195) | 1183259..1183450 | - | 192 | WP_004088104.1 | hypothetical protein | - |
| OK119_RS05200 (OK119_05200) | 1183709..1183954 | - | 246 | WP_004088108.1 | hypothetical protein | - |
| OK119_RS05205 (OK119_05205) | 1184039..1184713 | + | 675 | WP_004088110.1 | helix-turn-helix transcriptional regulator | - |
| OK119_RS05210 (OK119_05210) | 1184764..1185375 | - | 612 | WP_004088112.1 | Fic/DOC family protein | Toxin Detail |
| OK119_RS05215 (OK119_05215) | 1185372..1185560 | - | 189 | WP_004088114.1 | antitoxin VbhA family protein | Antitoxin Detail |
| OK119_RS05220 (OK119_05220) | 1185952..1186488 | + | 537 | WP_038233020.1 | hypothetical protein | - |
| OK119_RS05225 (OK119_05225) | 1186485..1186898 | + | 414 | WP_004088056.1 | DUF1566 domain-containing protein | - |
| OK119_RS05230 (OK119_05230) | 1186895..1187296 | + | 402 | WP_004088054.1 | hypothetical protein | - |
| OK119_RS05235 (OK119_05235) | 1187293..1187442 | + | 150 | WP_012382602.1 | hypothetical protein | - |
| OK119_RS05240 (OK119_05240) | 1187660..1187806 | + | 147 | WP_225621633.1 | hypothetical protein | - |
| OK119_RS05245 (OK119_05245) | 1187829..1188020 | + | 192 | WP_012382603.1 | hypothetical protein | - |
| OK119_RS05250 (OK119_05250) | 1188041..1188385 | + | 345 | WP_004088346.1 | hypothetical protein | - |
| OK119_RS05255 (OK119_05255) | 1188425..1189246 | + | 822 | WP_004088345.1 | DUF2303 family protein | - |
| OK119_RS05260 (OK119_05260) | 1189262..1190188 | + | 927 | WP_004088344.1 | phage recombination protein Bet | - |
| OK119_RS05265 (OK119_05265) | 1190185..1191837 | + | 1653 | WP_004088343.1 | YqaJ viral recombinase family protein | - |
| OK119_RS05270 (OK119_05270) | 1191875..1192630 | + | 756 | WP_004088342.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| OK119_RS05275 (OK119_05275) | 1192891..1193511 | + | 621 | WP_004088341.1 | Bro-N domain-containing protein | - |
| OK119_RS05280 (OK119_05280) | 1193578..1194024 | + | 447 | WP_004088340.1 | single-stranded DNA-binding protein | - |
| OK119_RS05285 (OK119_05285) | 1194043..1194291 | + | 249 | WP_011097904.1 | DUF4224 domain-containing protein | - |
| OK119_RS05290 (OK119_05290) | 1194291..1195310 | + | 1020 | WP_011097905.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK119_RS05295 (OK119_05295) | 1195452..1196501 | + | 1050 | WP_012382604.1 | ATP-binding protein | - |
| OK119_RS05300 (OK119_05300) | 1196494..1197921 | + | 1428 | WP_004572832.1 | nitrogen regulation protein NR(I) | - |
| OK119_RS05305 (OK119_05305) | 1197983..1198759 | - | 777 | Protein_1028 | Tn3 family transposase | - |
| OK119_RS05310 (OK119_05310) | 1198745..1199749 | + | 1005 | Protein_1029 | DNA topoisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|