MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79524 bp
Accession: NZ_CP104859 Location: 1..79524 Organism: Salmonella sp. 3C Replicon: plasmid pTL-2
Accession: NZ_CP104859 Location: 1..79524 Organism: Salmonella sp. 3C Replicon: plasmid pTL-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7E69_RS23720 (N7E69_23720) | 629..1192 | + | 564 | WP_000129019.1 | fertility inhibition protein FinO | - |
| N7E69_RS23725 (N7E69_23725) | 1309..1590 | + | 282 | Protein_2 | disulfide bond formation protein DsbA | - |
| N7E69_RS23730 (N7E69_23730) | 1871..2438 | + | 568 | Protein_3 | phospholipase D family protein | - |
| N7E69_RS23735 (N7E69_23735) | 2549..2815 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| N7E69_RS23740 (N7E69_23740) | 3063..3140 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| N7E69_RS23745 (N7E69_23745) | 3121..4002 | + | 882 | WP_001675606.1 | incFII family plasmid replication initiator RepA | - |
| N7E69_RS23750 (N7E69_23750) | 4797..5191 | - | 395 | Protein_7 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| N7E69_RS23755 (N7E69_23755) | 5260..5394 | - | 135 | Protein_8 | IS66 family transposase ISEc8 | Transposase |
| N7E69_RS23760 (N7E69_23760) | 5549..5746 | - | 198 | WP_001675602.1 | transposase | - |
| N7E69_RS23765 (N7E69_23765) | 6041..6643 | - | 603 | WP_223151229.1 | hypothetical protein | - |
| N7E69_RS23770 (N7E69_23770) | 6871..7530 | - | 660 | WP_001575507.1 | hypothetical protein | - |
| N7E69_RS23775 (N7E69_23775) | 8989..9261 | + | 273 | WP_001178538.1 | hypothetical protein | - |
| N7E69_RS23780 (N7E69_23780) | 9497..10294 | + | 798 | WP_000704721.1 | hypothetical protein | VF |
| N7E69_RS23785 (N7E69_23785) | 10322..11086 | + | 765 | WP_000827659.1 | hypothetical protein | VF |
| N7E69_RS23790 (N7E69_23790) | 11073..11348 | + | 276 | WP_001020576.1 | hypothetical protein | - |
| N7E69_RS23795 (N7E69_23795) | 11348..12061 | + | 714 | WP_000801115.1 | hypothetical protein | VF |
| N7E69_RS23800 (N7E69_23800) | 12186..12770 | + | 585 | WP_001575501.1 | hypothetical protein | - |
| N7E69_RS23805 (N7E69_23805) | 12879..13055 | + | 177 | WP_139782396.1 | hypothetical protein | VF |
| N7E69_RS23810 (N7E69_23810) | 13316..13477 | + | 162 | WP_001816720.1 | hypothetical protein | - |
| N7E69_RS23815 (N7E69_23815) | 13503..14351 | + | 849 | WP_000175391.1 | SdiA-regulated domain-containing protein | - |
| N7E69_RS23820 (N7E69_23820) | 14921..15349 | - | 429 | WP_000812999.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N7E69_RS23825 (N7E69_23825) | 15346..15576 | - | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N7E69_RS23830 (N7E69_23830) | 16321..16539 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N7E69_RS23835 (N7E69_23835) | 16541..16846 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N7E69_RS23840 (N7E69_23840) | 16848..17138 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| N7E69_RS23845 (N7E69_23845) | 17135..17656 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| N7E69_RS23850 (N7E69_23850) | 17691..18473 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| N7E69_RS23855 (N7E69_23855) | 18482..19165 | + | 684 | WP_001751692.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| N7E69_RS23860 (N7E69_23860) | 19219..19707 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| N7E69_RS23865 (N7E69_23865) | 19701..20037 | + | 337 | Protein_30 | hypothetical protein | - |
| N7E69_RS23870 (N7E69_23870) | 19947..20369 | + | 423 | WP_225236769.1 | LysM peptidoglycan-binding domain-containing protein | - |
| N7E69_RS23875 (N7E69_23875) | 20264..20809 | + | 546 | WP_071591236.1 | inverse autotransporter beta domain-containing protein | - |
| N7E69_RS23880 (N7E69_23880) | 20876..21244 | - | 369 | WP_001675946.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| N7E69_RS23885 (N7E69_23885) | 21301..21726 | + | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| N7E69_RS23890 (N7E69_23890) | 21853..22503 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| N7E69_RS23895 (N7E69_23895) | 22764..23489 | - | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| N7E69_RS23900 (N7E69_23900) | 23770..25551 | - | 1782 | WP_001675599.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| N7E69_RS23905 (N7E69_23905) | 25603..25770 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| N7E69_RS23910 (N7E69_23910) | 25733..26500 | - | 768 | WP_001575487.1 | virulence protein SpvA | - |
| N7E69_RS23915 (N7E69_23915) | 26674..26838 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| N7E69_RS23920 (N7E69_23920) | 27012..27905 | - | 894 | WP_000346692.1 | virulence genes transcriptional activator SpvR | - |
| N7E69_RS23925 (N7E69_23925) | 28512..29549 | + | 1038 | WP_001121398.1 | IS630 family transposase ISEc33 | Transposase |
| N7E69_RS23930 (N7E69_23930) | 29738..30763 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| N7E69_RS23935 (N7E69_23935) | 30696..32360 | - | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| N7E69_RS23940 (N7E69_23940) | 32344..32904 | - | 561 | WP_001240330.1 | Tn3 family transposase TnBth3 | Transposase |
| N7E69_RS23945 (N7E69_23945) | 33111..33851 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| N7E69_RS23950 (N7E69_23950) | 34506..34994 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| N7E69_RS23955 (N7E69_23955) | 35253..36368 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| N7E69_RS23960 (N7E69_23960) | 36454..36870 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| N7E69_RS23965 (N7E69_23965) | 36973..37389 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| N7E69_RS23970 (N7E69_23970) | 37446..38047 | + | 602 | Protein_51 | DUF2913 family protein | - |
| N7E69_RS23975 (N7E69_23975) | 38044..38986 | - | 943 | Protein_52 | ISNCY family transposase ISSen7 | VF |
| N7E69_RS23980 (N7E69_23980) | 39379..39999 | + | 621 | WP_000864788.1 | ParA family protein | - |
| N7E69_RS23985 (N7E69_23985) | 40051..40281 | + | 231 | WP_108629079.1 | plasmid partition protein ParG | - |
| N7E69_RS23990 (N7E69_23990) | 40920..41273 | - | 354 | WP_001675596.1 | DNA distortion polypeptide 3 | - |
| N7E69_RS23995 (N7E69_23995) | 41410..41856 | - | 447 | WP_001074381.1 | hypothetical protein | - |
| N7E69_RS24000 (N7E69_24000) | 41896..42732 | - | 837 | WP_001575533.1 | replication initiation protein | - |
| N7E69_RS24005 (N7E69_24005) | 43968..44219 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| N7E69_RS24010 (N7E69_24010) | 44209..44490 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N7E69_RS24015 (N7E69_24015) | 44636..44959 | + | 324 | WP_001181909.1 | hypothetical protein | - |
| N7E69_RS24020 (N7E69_24020) | 45004..45249 | + | 246 | WP_000356542.1 | hypothetical protein | - |
| N7E69_RS24025 (N7E69_24025) | 45239..45454 | + | 216 | WP_001180117.1 | hypothetical protein | - |
| N7E69_RS24030 (N7E69_24030) | 45547..45876 | + | 330 | WP_000866650.1 | hypothetical protein | - |
| N7E69_RS24035 (N7E69_24035) | 45919..46098 | + | 180 | WP_001575529.1 | hypothetical protein | - |
| N7E69_RS24040 (N7E69_24040) | 46168..46317 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| N7E69_RS24045 (N7E69_24045) | 46330..46602 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| N7E69_RS24050 (N7E69_24050) | 46928..47473 | + | 546 | WP_000757691.1 | DNA distortion polypeptide 1 | - |
| N7E69_RS24055 (N7E69_24055) | 47476..48657 | + | 1182 | WP_000539536.1 | hypothetical protein | Relaxase |
| N7E69_RS24060 (N7E69_24060) | 49003..49521 | + | 519 | WP_001675951.1 | transcription termination/antitermination NusG family protein | - |
| N7E69_RS24065 (N7E69_24065) | 49451..49663 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| N7E69_RS24070 (N7E69_24070) | 49696..50343 | + | 648 | WP_000953526.1 | hypothetical protein | VF |
| N7E69_RS24075 (N7E69_24075) | 50321..50617 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| N7E69_RS24080 (N7E69_24080) | 50636..53389 | + | 2754 | WP_001675613.1 | Type IV secretion system protein virB4 | VF |
| N7E69_RS24085 (N7E69_24085) | 53400..54158 | + | 759 | WP_000744198.1 | type IV secretion system protein | - |
| N7E69_RS24090 (N7E69_24090) | 54159..54386 | + | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| N7E69_RS24095 (N7E69_24095) | 54396..55529 | + | 1134 | WP_000513456.1 | type IV secretion system protein | - |
| N7E69_RS24100 (N7E69_24100) | 55656..55784 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| N7E69_RS24105 (N7E69_24105) | 55774..56487 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| N7E69_RS24110 (N7E69_24110) | 56492..57421 | + | 930 | WP_000783377.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| N7E69_RS24115 (N7E69_24115) | 57418..58623 | + | 1206 | WP_000139139.1 | hypothetical protein | VF |
| N7E69_RS24120 (N7E69_24120) | 58625..59655 | + | 1031 | Protein_81 | Type IV secretion system protein VirB11 | VF |
| N7E69_RS24125 (N7E69_24125) | 59658..61493 | + | 1836 | WP_000053823.1 | type IV secretory system conjugative DNA transfer family protein | - |
| N7E69_RS24130 (N7E69_24130) | 61490..61903 | + | 414 | WP_001575522.1 | cag pathogenicity island Cag12 family protein | - |
| N7E69_RS24135 (N7E69_24135) | 61900..62202 | + | 303 | WP_015059377.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| N7E69_RS24140 (N7E69_24140) | 62315..62509 | + | 195 | Protein_85 | ATP-binding protein | - |
| N7E69_RS24145 (N7E69_24145) | 62513..63088 | + | 576 | WP_001198970.1 | hypothetical protein | - |
| N7E69_RS24150 (N7E69_24150) | 63093..65246 | + | 2154 | WP_001235753.1 | type IA DNA topoisomerase | - |
| N7E69_RS24155 (N7E69_24155) | 65243..65449 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| N7E69_RS24160 (N7E69_24160) | 65465..65899 | + | 435 | WP_001293135.1 | H-NS family nucleoid-associated regulatory protein | - |
| N7E69_RS24165 (N7E69_24165) | 66562..67047 | + | 486 | WP_001281416.1 | Abi family protein | - |
| N7E69_RS24170 (N7E69_24170) | 67206..68333 | - | 1128 | WP_000156234.1 | hypothetical protein | - |
| N7E69_RS24175 (N7E69_24175) | 69482..70342 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N7E69_RS24180 (N7E69_24180) | 70525..71082 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| N7E69_RS24185 (N7E69_24185) | 71244..74249 | + | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| N7E69_RS24190 (N7E69_24190) | 74364..75008 | - | 645 | WP_000203397.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N7E69_RS24195 (N7E69_24195) | 75082..79338 | + | 4257 | Protein_96 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|