MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34637 bp
Accession: NZ_CP104747 Location: 1..34637 Organism: Erwinia pyrifoliae strain CP20113301 Replicon: plasmid unnamed2
Accession: NZ_CP104747 Location: 1..34637 Organism: Erwinia pyrifoliae strain CP20113301 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYP80_RS19445 (NYP80_19445) | 454..1035 | + | 582 | WP_012814633.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NYP80_RS19450 (NYP80_19450) | 1054..1873 | + | 820 | Protein_2 | DUF4225 domain-containing protein | - |
| NYP80_RS19455 (NYP80_19455) | 1851..2180 | - | 330 | WP_041473955.1 | hypothetical protein | - |
| NYP80_RS19460 (NYP80_19460) | 3348..3884 | + | 537 | WP_012814649.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| NYP80_RS19465 (NYP80_19465) | 3988..4230 | + | 243 | Protein_5 | IS481 family transposase ISErsp1 | Transposase |
| NYP80_RS19470 (NYP80_19470) | 4660..5286 | + | 627 | WP_011078071.1 | Iron-sulfur cluster carrier protein | VF |
| NYP80_RS19475 (NYP80_19475) | 5283..5495 | + | 213 | WP_014540014.1 | plasmid partition protein ParG | - |
| NYP80_RS19480 (NYP80_19480) | 6741..7718 | + | 978 | WP_011078049.1 | replication initiation protein | - |
| NYP80_RS19485 (NYP80_19485) | 7996..8337 | + | 342 | WP_014539990.1 | IS3 family transposase ISAs17 | Transposase |
| NYP80_RS19490 (NYP80_19490) | 8368..8515 | - | 148 | Protein_10 | IS3 family transposase | - |
| NYP80_RS19495 (NYP80_19495) | 8588..9796 | + | 1209 | WP_261648174.1 | IS256 family transposase ISEc39 | Transposase |
| NYP80_RS19500 (NYP80_19500) | 9893..10321 | - | 429 | Protein_12 | transposase | - |
| NYP80_RS19505 (NYP80_19505) | 10977..11381 | - | 405 | WP_011113994.1 | H-NS family nucleoid-associated regulatory protein | - |
| NYP80_RS19510 (NYP80_19510) | 12164..13102 | - | 939 | WP_012814643.1 | Coagulase/fibrinolysin | VF |
| NYP80_RS19515 (NYP80_19515) | 13310..14167 | - | 858 | WP_012814642.1 | LysR family transcriptional regulator | - |
| NYP80_RS19520 (NYP80_19520) | 14308..15696 | + | 1389 | WP_041473957.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| NYP80_RS19525 (NYP80_19525) | 15996..17552 | - | 1557 | WP_041473953.1 | hypothetical protein | VF |
| NYP80_RS19530 (NYP80_19530) | 18060..18473 | - | 414 | WP_011113999.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NYP80_RS19535 (NYP80_19535) | 18474..18788 | - | 315 | WP_261648176.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NYP80_RS19540 (NYP80_19540) | 19052..19336 | - | 285 | WP_011078079.1 | VF530 family DNA-binding protein | - |
| NYP80_RS19545 (NYP80_19545) | 19496..19783 | - | 288 | WP_011078058.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP80_RS19550 (NYP80_19550) | 19773..20027 | - | 255 | WP_011078059.1 | plasmid stabilization protein | Antitoxin Detail |
| NYP80_RS19555 (NYP80_19555) | 20238..21203 | - | 966 | WP_011078060.1 | ThiF family adenylyltransferase | - |
| NYP80_RS19560 (NYP80_19560) | 21219..21977 | - | 759 | WP_012814638.1 | thiazole synthase | - |
| NYP80_RS19565 (NYP80_19565) | 21981..22178 | - | 198 | WP_012814637.1 | sulfur carrier protein ThiS | - |
| NYP80_RS19570 (NYP80_19570) | 22175..23107 | - | 933 | WP_041473952.1 | FAD-dependent oxidoreductase | - |
| NYP80_RS19575 (NYP80_19575) | 23483..23644 | - | 162 | Protein_27 | Txe/YoeB family addiction module toxin | - |
| NYP80_RS19580 (NYP80_19580) | 23824..24408 | + | 585 | WP_012814636.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| NYP80_RS19585 (NYP80_19585) | 24735..25394 | + | 660 | WP_041473951.1 | class I SAM-dependent methyltransferase | - |
| NYP80_RS19590 (NYP80_19590) | 25779..27809 | - | 2031 | WP_011114006.1 | choline transporter | - |
| NYP80_RS19595 (NYP80_19595) | 28222..28391 | + | 170 | Protein_31 | Rpn family recombination-promoting nuclease/putative transposase | - |
| NYP80_RS19600 (NYP80_19600) | 29447..30259 | - | 813 | WP_259818179.1 | Methionine-binding lipoprotein MetQ | VF |
| NYP80_RS19605 (NYP80_19605) | 30279..30947 | - | 669 | WP_012814635.1 | methionine ABC transporter permease | - |
| NYP80_RS19610 (NYP80_19610) | 30940..31920 | - | 981 | WP_011078067.1 | Methionine import ATP-binding protein MetN | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia pyrifoliae Ep1/96 | Non-Mobilizable plasmid | TA6130 | NC_004445 | 1..35904 | 0.004 |