MGE detailed information
MGE type: Prophage MGE length: 8694 bp
Accession: NZ_CP104677 Location: 283255..291948 Organism: Salmonella enterica strain PNUSAS036471 Replicon: chromosome
Accession: NZ_CP104677 Location: 283255..291948 Organism: Salmonella enterica strain PNUSAS036471 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4534_RS01280 (279059) | 279059..280162 | + | 1104 | WP_001528146.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| N4534_RS01285 (280246) | 280246..280380 | - | 135 | WP_012219321.1 | hypothetical protein | - |
| N4534_RS01290 (280358) | 280358..280741 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| N4534_RS01295 (281163) | 281163..282272 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| N4534_RS01300 (282332) | 282332..283258 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| N4534_RS01305 (283255) | 283255..284532 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| N4534_RS01310 (284529) | 284529..285296 | + | 768 | WP_000082083.1 | Proline--tRNA ligase | VF |
| N4534_RS01315 (285298) | 285298..286011 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| N4534_RS01320 (286143) | 286143..286364 | + | 222 | WP_001535398.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N4534_RS01325 (286361) | 286361..286729 | + | 369 | WP_000174966.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N4534_RS01330 (286988) | 286988..288304 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| N4534_RS01335 (288409) | 288409..289296 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| N4534_RS01340 (289293) | 289293..290138 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| N4534_RS01345 (290141) | 290141..291211 | + | 1071 | WP_000907845.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| N4534_RS01350 (291208) | 291208..291948 | + | 741 | WP_000073547.1 | glycerophosphodiester phosphodiesterase | - |
| N4534_RS01355 (291961) | 291961..292377 | - | 417 | WP_000826046.1 | DUF2756 family protein | - |
| N4534_RS01360 (292503) | 292503..294245 | + | 1743 | WP_000805094.1 | gamma-glutamyltransferase | - |
| N4534_RS01365 (294290) | 294290..295324 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| N4534_RS01370 (295321) | 295321..296292 | - | 972 | WP_001038949.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.008 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.008 |