MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66033 bp
Accession: NZ_CP104622 Location: 1..66033 Organism: Escherichia coli strain AHM9C68I Replicon: plasmid pHNAH968-3
Accession: NZ_CP104622 Location: 1..66033 Organism: Escherichia coli strain AHM9C68I Replicon: plasmid pHNAH968-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5859_RS24425 (N5859_24340) | 1..1029 | + | 1029 | WP_001175213.1 | plasmid replication initiator RepA | - |
| N5859_RS24430 (N5859_24345) | 1730..1920 | + | 191 | Protein_1 | hypothetical protein | - |
| N5859_RS24435 (N5859_24350) | 2083..2244 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| N5859_RS24440 (N5859_24355) | 2570..2722 | + | 153 | Protein_3 | DUF5431 family protein | - |
| N5859_RS24445 (N5859_24360) | 2667..2789 | + | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| N5859_RS24450 (N5859_24365) | 2939..3535 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| N5859_RS24455 (N5859_24370) | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| N5859_RS24460 (N5859_24375) | 3911..4576 | - | 666 | WP_000532148.1 | division plane positioning ATPase MipZ | - |
| N5859_RS24465 (N5859_24380) | 5165..5680 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| N5859_RS24470 (N5859_24385) | 5784..6326 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| N5859_RS24475 (N5859_24390) | 6323..6577 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| N5859_RS24480 (N5859_24395) | 6574..6816 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| N5859_RS24485 (N5859_24400) | 6941..7285 | + | 345 | Protein_12 | WbuC family cupin fold metalloprotein | - |
| N5859_RS24490 (N5859_24405) | 7332..8207 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| N5859_RS24495 (N5859_24410) | 8460..9722 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| N5859_RS24500 (N5859_24415) | 10480..10809 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| N5859_RS24505 (N5859_24420) | 10918..11064 | - | 147 | WP_001356709.1 | hypothetical protein | - |
| N5859_RS24510 (N5859_24425) | 11391..11714 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| N5859_RS24515 (N5859_24430) | 11756..11965 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| N5859_RS24520 (N5859_24435) | 12062..12286 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| N5859_RS24525 (N5859_24440) | 12338..12598 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| N5859_RS24530 (N5859_24445) | 12588..12839 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| N5859_RS24535 (N5859_24450) | 13389..13667 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| N5859_RS24540 (N5859_24455) | 14087..14353 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| N5859_RS24545 (N5859_24460) | 14460..14903 | - | 444 | WP_000068545.1 | hypothetical protein | - |
| N5859_RS24550 (N5859_24465) | 15200..15382 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| N5859_RS24555 (N5859_24470) | 15407..15844 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| N5859_RS24560 (N5859_24475) | 15975..16301 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| N5859_RS24565 (N5859_24480) | 16321..17028 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| N5859_RS24570 (N5859_24485) | 17030..17782 | - | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| N5859_RS24575 (N5859_24490) | 17800..18201 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| N5859_RS24580 (N5859_24495) | 18569..18910 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| N5859_RS24585 (N5859_24500) | 18907..23220 | + | 4314 | WP_284632976.1 | relaxase | - |
| N5859_RS24590 (N5859_24505) | 23441..25066 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| N5859_RS24595 (N5859_24510) | 25138..25911 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| N5859_RS24600 (N5859_24515) | 25870..26310 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| N5859_RS24605 (N5859_24520) | 26656..26862 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| N5859_RS24610 (N5859_24525) | 26931..29096 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| N5859_RS24615 (N5859_24530) | 29101..29676 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| N5859_RS24620 (N5859_24535) | 29846..31522 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| N5859_RS24625 (N5859_24540) | 31617..32149 | - | 533 | Protein_40 | thermonuclease family protein | - |
| N5859_RS24630 (N5859_24545) | 32179..32832 | - | 654 | WP_170852113.1 | hypothetical protein | - |
| N5859_RS24635 (N5859_24550) | 32844..33968 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| N5859_RS24640 (N5859_24555) | 34873..35028 | - | 156 | WP_001358489.1 | hypothetical protein | - |
| N5859_RS24645 (N5859_24560) | 35067..35198 | - | 132 | WP_255639686.1 | hypothetical protein | - |
| N5859_RS24650 (N5859_24565) | 35417..36703 | - | 1287 | WP_015057162.1 | hypothetical protein | VF |
| N5859_RS24655 (N5859_24570) | 36716..37351 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| N5859_RS24660 (N5859_24575) | 37355..37837 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| N5859_RS24665 (N5859_24580) | 37903..38460 | - | 558 | WP_000095048.1 | type 4 pilus major pilin | - |
| N5859_RS24670 (N5859_24585) | 38505..39614 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| N5859_RS24675 (N5859_24590) | 39605..41143 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| N5859_RS24680 (N5859_24595) | 41168..41662 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| N5859_RS24685 (N5859_24600) | 41646..42956 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| N5859_RS24690 (N5859_24605) | 43007..44650 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| N5859_RS24695 (N5859_24610) | 44643..45173 | - | 531 | WP_001220542.1 | sigma 54-interacting transcriptional regulator | - |
| N5859_RS24700 (N5859_24615) | 45220..47178 | - | 1959 | WP_284632969.1 | type IV secretory system conjugative DNA transfer family protein | - |
| N5859_RS24705 (N5859_24620) | 47194..48249 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| N5859_RS24710 (N5859_24625) | 48268..49407 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| N5859_RS24715 (N5859_24630) | 49397..50167 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| N5859_RS24720 (N5859_24635) | 50164..50898 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| N5859_RS24725 (N5859_24640) | 50898..51032 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| N5859_RS24730 (N5859_24645) | 51064..53421 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| N5859_RS24735 (N5859_24650) | 53427..53747 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| N5859_RS24740 (N5859_24655) | 53818..54108 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| N5859_RS24745 (N5859_24660) | 54108..54692 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| N5859_RS24750 (N5859_24665) | 54713..55111 | - | 399 | WP_072643816.1 | hypothetical protein | - |
| N5859_RS24755 (N5859_24670) | 55230..55667 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| N5859_RS24760 (N5859_24675) | 55673..56908 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| N5859_RS24765 (N5859_24680) | 56911..57210 | - | 300 | WP_000835764.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| N5859_RS24770 (N5859_24685) | 57278..57559 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5859_RS24775 (N5859_24690) | 57549..57800 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| N5859_RS24780 (N5859_24695) | 57900..58535 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| N5859_RS24785 (N5859_24700) | 58608..58895 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| N5859_RS24790 (N5859_24705) | 58908..59162 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| N5859_RS24795 (N5859_24710) | 59164..59805 | - | 642 | WP_227311782.1 | hypothetical protein | VF |
| N5859_RS24800 (N5859_24715) | 59811..60806 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| N5859_RS24805 (N5859_24720) | 60810..61067 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| N5859_RS24810 (N5859_24725) | 61064..61417 | - | 354 | WP_223286767.1 | hypothetical protein | - |
| N5859_RS24815 (N5859_24730) | 61637..62083 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| N5859_RS24820 (N5859_24735) | 62094..62264 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| N5859_RS24825 (N5859_24740) | 62268..62711 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| N5859_RS24830 (N5859_24745) | 63085..64038 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| N5859_RS24835 (N5859_24750) | 64065..64241 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| N5859_RS24840 (N5859_24755) | 64234..64449 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| N5859_RS24845 (N5859_24760) | 64442..64894 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|