MGE detailed information
MGE type: Conjugative plasmid MGE length: 84082 bp
Accession: NZ_CP104621 Location: 1..84082 Organism: Escherichia coli strain AHM9C68I Replicon: plasmid pHNAH968-2
Accession: NZ_CP104621 Location: 1..84082 Organism: Escherichia coli strain AHM9C68I Replicon: plasmid pHNAH968-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5859_RS23905 (1) | 1..858 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| N5859_RS23910 (1797) | 1797..2258 | + | 462 | WP_072643484.1 | histidine phosphatase family protein | - |
| N5859_RS23915 (2414) | 2414..2680 | - | 267 | Protein_2 | IS91 family transposase ISSbo1 | Transposase |
| N5859_RS23920 (2782) | 2782..3954 | + | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| N5859_RS23925 (3954) | 3954..4748 | + | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| N5859_RS23930 (4804) | 4804..5742 | - | 939 | Protein_5 | IS91 family transposase IS1294 | Transposase |
| N5859_RS23935 (5752) | 5752..5940 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| N5859_RS23940 (6114) | 6114..6404 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| N5859_RS23945 (6700) | 6700..6930 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5859_RS23950 (6927) | 6927..7343 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5859_RS23955 (7505) | 7505..9643 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| N5859_RS23960 (9997) | 9997..10254 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| N5859_RS23965 (10254) | 10254..10844 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| N5859_RS23970 (11107) | 11107..12663 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| N5859_RS23975 (12855) | 12855..13472 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| N5859_RS23980 (13765) | 13765..14610 | - | 846 | Protein_15 | permease | - |
| N5859_RS23985 (14707) | 14707..15462 | - | 756 | WP_032163908.1 | IS21 family transposase ISSso4 | Transposase |
| N5859_RS23990 (15479) | 15479..17014 | - | 1536 | WP_086625620.1 | IS21 family transposase ISSso4 | Transposase |
| N5859_RS23995 (17248) | 17248..17448 | - | 201 | Protein_18 | permease | - |
| N5859_RS24000 (17553) | 17553..17876 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| N5859_RS24005 (18075) | 18075..18779 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N5859_RS24010 (18921) | 18921..19625 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N5859_RS24015 (20047) | 20047..20922 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| N5859_RS24020 (20969) | 20969..21445 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| N5859_RS24025 (21704) | 21704..22447 | - | 744 | Protein_24 | Beta-lactamase TEM | ARG |
| N5859_RS24030 (22497) | 22497..23201 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5859_RS24035 (23327) | 23327..24082 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| N5859_RS24040 (24252) | 24252..25112 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N5859_RS24045 (25295) | 25295..25852 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| N5859_RS24050 (26206) | 26206..26910 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N5859_RS24055 (27035) | 27035..27229 | - | 195 | Protein_30 | IS6 family transposase IS15DII | Transposase |
| N5859_RS24060 (27295) | 27295..27360 | + | 66 | Protein_31 | IS1 family transposase | - |
| N5859_RS24065 (28809) | 28809..29043 | + | 235 | Protein_32 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5859_RS24070 (29171) | 29171..29374 | + | 204 | Protein_33 | hypothetical protein | - |
| N5859_RS24075 (29575) | 29575..29925 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| N5859_RS24080 (29928) | 29928..30890 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| N5859_RS24085 (31037) | 31037..31330 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| N5859_RS24090 (31407) | 31407..32090 | + | 684 | WP_000085883.1 | DNA methylase | - |
| N5859_RS24095 (32091) | 32091..32312 | + | 222 | WP_284632967.1 | hypothetical protein | - |
| N5859_RS24100 (32326) | 32326..32760 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| N5859_RS24105 (32811) | 32811..33587 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| N5859_RS24110 (34005) | 34005..34430 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| N5859_RS24115 (34477) | 34477..34899 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| N5859_RS24120 (34896) | 34896..35087 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| N5859_RS24125 (35301) | 35301..35456 | + | 156 | WP_159420149.1 | hypothetical protein | - |
| N5859_RS24130 (36125) | 36125..36355 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| N5859_RS24135 (36407) | 36407..37768 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| N5859_RS24140 (37815) | 37815..38378 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| N5859_RS24145 (38464) | 38464..38931 | - | 468 | Protein_48 | hypothetical protein | - |
| N5859_RS24150 (39233) | 39233..39760 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| N5859_RS24155 (39818) | 39818..40051 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| N5859_RS24160 (40112) | 40112..42135 | + | 2024 | Protein_51 | ParB/RepB/Spo0J family partition protein | - |
| N5859_RS24165 (42204) | 42204..42638 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| N5859_RS24170 (42635) | 42635..43397 | + | 763 | Protein_53 | plasmid SOS inhibition protein A | - |
| N5859_RS24175 (43375) | 43375..43554 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (43366) | 43366..43590 | + | 225 | NuclAT_0 | - | - |
| - (43366) | 43366..43590 | + | 225 | NuclAT_0 | - | - |
| - (43366) | 43366..43590 | + | 225 | NuclAT_0 | - | - |
| - (43366) | 43366..43590 | + | 225 | NuclAT_0 | - | - |
| N5859_RS24180 (43576) | 43576..43725 | + | 150 | Protein_55 | plasmid maintenance protein Mok | - |
| N5859_RS24185 (43667) | 43667..43792 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| N5859_RS24190 (44111) | 44111..44407 | - | 297 | Protein_57 | hypothetical protein | - |
| N5859_RS24195 (44707) | 44707..45003 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| N5859_RS24200 (45114) | 45114..45935 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| N5859_RS24205 (46232) | 46232..46879 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| N5859_RS24210 (47156) | 47156..47539 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N5859_RS24215 (47730) | 47730..48416 | + | 687 | WP_001825184.1 | PAS domain-containing protein | - |
| N5859_RS24220 (48510) | 48510..48737 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| N5859_RS24225 (48771) | 48771..49130 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| N5859_RS24230 (49145) | 49145..49456 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| N5859_RS24235 (49478) | 49478..50044 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| N5859_RS24240 (50031) | 50031..50759 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| N5859_RS24245 (50759) | 50759..52186 | + | 1428 | WP_032297072.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N5859_RS24250 (52176) | 52176..52766 | + | 591 | WP_000002778.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| N5859_RS24255 (52759) | 52759..52950 | + | 192 | WP_032072783.1 | conjugal transfer protein TrbD | - |
| N5859_RS24260 (52962) | 52962..53213 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| N5859_RS24265 (53210) | 53210..53725 | + | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N5859_RS24270 (53860) | 53860..54081 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| N5859_RS24275 (54241) | 54241..56868 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| N5859_RS24280 (56865) | 56865..57251 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| N5859_RS24285 (57248) | 57248..57880 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| N5859_RS24290 (57877) | 57877..58869 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| N5859_RS24295 (58896) | 58896..59204 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| N5859_RS24300 (59267) | 59267..59788 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| N5859_RS24305 (59815) | 59815..60453 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N5859_RS24310 (60450) | 60450..60821 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| N5859_RS24315 (60847) | 60847..61269 | + | 423 | WP_001229309.1 | HNH endonuclease signature motif containing protein | - |
| N5859_RS24320 (61266) | 61266..63116 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N5859_RS24325 (63143) | 63143..63400 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| N5859_RS24330 (63393) | 63393..64136 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N5859_RS24335 (64297) | 64297..64533 | + | 237 | WP_000270010.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N5859_RS24340 (64520) | 64520..65065 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N5859_RS24345 (65055) | 65055..65369 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| N5859_RS24350 (65323) | 65323..65715 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| N5859_RS24355 (65702) | 65702..67075 | + | 1374 | WP_000944325.1 | conjugal transfer pilus assembly protein TraH | - |
| N5859_RS24360 (67072) | 67072..69888 | + | 2817 | WP_284632958.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N5859_RS24365 (69921) | 69921..70442 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| N5859_RS24370 (70467) | 70467..71198 | + | 732 | WP_021559024.1 | conjugal transfer complement resistance protein TraT | - |
| N5859_RS24375 (71401) | 71401..72138 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| N5859_RS24380 (72189) | 72189..74423 | + | 2235 | WP_284632960.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5859_RS24385 (74423) | 74423..79693 | + | 5271 | WP_061093447.1 | Multifunctional conjugation protein TraI | Relaxase |
| N5859_RS24390 (79713) | 79713..80459 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| N5859_RS24395 (80514) | 80514..81074 | + | 561 | WP_063097573.1 | fertility inhibition protein FinO | - |
| N5859_RS24400 (81206) | 81206..81406 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| N5859_RS24405 (81792) | 81792..82391 | + | 600 | WP_032083981.1 | PIN domain-containing protein | - |
| N5859_RS24410 (82453) | 82453..82785 | + | 333 | WP_152916585.1 | hypothetical protein | - |
| - (82986) | 82986..83045 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (82986) | 82986..83045 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (82986) | 82986..83045 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - (82986) | 82986..83045 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| N5859_RS24415 (83090) | 83090..83239 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| N5859_RS24420 (83523) | 83523..83771 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|