NZ_CP1045961..157264

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 157264 bp
Accession: NZ_CP104596        Location: 1..157264         Organism: Escherichia coli strain EC9952       Replicon: plasmid pEC9952-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N5B57_RS23805 (192) 192..551 - 360 WP_001098992.1 type IV conjugative transfer system pilin TraA -
N5B57_RS23810 (584) 584..811 - 228 WP_000089263.1 conjugal transfer relaxosome protein TraY -
N5B57_RS23815 (948) 948..1619 - 672 WP_000283561.1 conjugal transfer transcriptional regulator TraJ -
N5B57_RS23820 (1813) 1813..2196 - 384 WP_001354030.1 conjugal transfer relaxosome DNA-binding protein TraM -
N5B57_RS23825 (2531) 2531..3121 + 591 WP_000252683.1 hypothetical protein VF
N5B57_RS23830 (3418) 3418..4239 - 822 WP_001234445.1 DUF932 domain-containing protein -
N5B57_RS23835 (4350) 4350..4646 - 297 WP_001272251.1 hypothetical protein -
N5B57_RS23840 (4946) 4946..5242 + 297 Protein_8 hypothetical protein -
N5B57_RS23845 (5561) 5561..5686 - 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
N5B57_RS23850 (5628) 5628..5777 - 150 Protein_10 plasmid maintenance protein Mok -
N5B57_RS23855 (5799) 5799..5978 + 180 WP_001309233.1 hypothetical protein -
- (5763) 5763..5987 - 225 NuclAT_0 - Antitoxin Detail
- (5763) 5763..5987 - 225 NuclAT_0 - Antitoxin Detail
- (5763) 5763..5987 - 225 NuclAT_0 - Antitoxin Detail
- (5763) 5763..5987 - 225 NuclAT_0 - Antitoxin Detail
N5B57_RS23860 (5956) 5956..6718 - 763 Protein_12 plasmid SOS inhibition protein A -
N5B57_RS23865 (6715) 6715..7149 - 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
N5B57_RS23870 (7218) 7218..9186 - 1969 Protein_14 ParB/RepB/Spo0J family partition protein -
N5B57_RS23875 (9247) 9247..9480 - 234 WP_000006003.1 DUF905 family protein -
N5B57_RS23880 (9538) 9538..10065 - 528 WP_000290834.1 single-stranded DNA-binding protein -
N5B57_RS23885 (10367) 10367..10822 + 456 Protein_17 hypothetical protein -
N5B57_RS23890 (10908) 10908..11471 - 564 WP_001298559.1 class I SAM-dependent methyltransferase -
N5B57_RS23895 (11518) 11518..12879 - 1362 WP_000170695.1 DUF3560 domain-containing protein -
N5B57_RS23900 (12931) 12931..13161 - 231 WP_000218642.1 hypothetical protein -
N5B57_RS23905 (13678) 13678..13926 + 249 WP_077249352.1 hypothetical protein -
N5B57_RS23910 (14199) 14199..14390 - 192 WP_001027516.1 hypothetical protein -
N5B57_RS23915 (14387) 14387..14809 - 423 WP_000271753.1 DUF1380 family protein -
N5B57_RS23920 (14856) 14856..15281 - 426 WP_001198928.1 antirestriction protein -
N5B57_RS23925 (15698) 15698..16474 - 777 WP_001753849.1 hypothetical protein -
N5B57_RS23930 (16525) 16525..17043 - 519 WP_123325260.1 DUF1380 family protein -
N5B57_RS23935 (16973) 16973..17194 - 222 WP_001104873.1 hypothetical protein -
N5B57_RS23940 (17195) 17195..17878 - 684 WP_000086185.1 DNA methylase -
N5B57_RS23945 (17955) 17955..18266 - 312 WP_011254640.1 hypothetical protein -
N5B57_RS23950 (18263) 18263..19165 - 903 WP_001348615.1 DUF1281 domain-containing protein -
N5B57_RS23955 (20032) 20032..21003 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
N5B57_RS23960 (21003) 21003..22169 - 1167 WP_000772446.1 hypothetical protein VF
N5B57_RS23965 (22757) 22757..23512 - 756 WP_000852146.1 replication initiation protein RepE -
N5B57_RS23970 (24286) 24286..25092 - 807 WP_000016982.1 site-specific integrase -
N5B57_RS23975 (25093) 25093..25398 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
N5B57_RS23980 (25400) 25400..25618 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
N5B57_RS23985 (26210) 26210..26698 + 489 WP_011254646.1 hypothetical protein -
N5B57_RS23990 (26732) 26732..27865 - 1134 WP_001542067.1 DUF3800 domain-containing protein -
N5B57_RS23995 (28032) 28032..28805 - 774 WP_000905949.1 hypothetical protein -
N5B57_RS24000 (28818) 28818..29318 - 501 WP_000528931.1 HEPN family nuclease -
N5B57_RS24005 (29583) 29583..29813 + 231 WP_001261278.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
N5B57_RS24010 (29810) 29810..30226 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N5B57_RS24015 (30271) 30271..34065 - 3795 WP_001144732.1 hypothetical protein -
N5B57_RS24020 (34446) 34446..34676 + 231 WP_001261286.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
N5B57_RS24025 (34673) 34673..35089 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
N5B57_RS24030 (35164) 35164..36729 + 1566 WP_001128474.1 AAA family ATPase -
N5B57_RS24035 (36714) 36714..37736 + 1023 WP_000361402.1 helicase UvrD -
N5B57_RS24045 (39067) 39067..41268 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
N5B57_RS24050 (41294) 41294..42627 - 1334 Protein_50 L-lysine N6-monooxygenase VF
N5B57_RS24055 (42624) 42624..44366 - 1743 WP_001015721.1 Aerobactin synthase VF
N5B57_RS24060 (44366) 44366..45313 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
N5B57_RS24065 (45314) 45314..47038 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
N5B57_RS24070 (47174) 47174..48367 + 1194 WP_000095526.1 MFS transporter -
N5B57_RS24075 (48747) 48747..49127 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
N5B57_RS24080 (49468) 49468..49881 - 414 Protein_56 phosphopyruvate hydratase -
N5B57_RS24085 (49879) 49879..50136 + 258 Protein_57 Tn3 family transposase -
N5B57_RS24090 (50370) 50370..51227 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
N5B57_RS24095 (51224) 51224..52081 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
N5B57_RS24100 (52078) 52078..52905 - 828 WP_000983710.1 Manganese transport system ATP-binding protein MntB VF
N5B57_RS24105 (52905) 52905..53819 - 915 WP_000949004.1 putative periplasmic iron-binding protein VF
N5B57_RS24110 (54175) 54175..54872 + 698 WP_223155668.1 IS1 family transposase IS1S Transposase
N5B57_RS24115 (55052) 55052..55565 - 514 Protein_63 DUF4113 domain-containing protein -
N5B57_RS24120 (55626) 55626..55730 - 105 Protein_64 AAA family ATPase -
N5B57_RS24125 (55732) 55732..56055 - 324 Protein_65 IS21 family transposase IS21 Transposase
N5B57_RS24130 (56801) 56801..57778 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
N5B57_RS24135 (58063) 58063..58803 - 741 WP_001066942.1 tyrosine-type recombinase/integrase -
N5B57_RS24140 (58924) 58924..59119 - 196 Protein_68 serine/threonine protein kinase -
N5B57_RS24145 (59206) 59206..59616 - 411 Protein_69 IS3 family transposase ISEhe3 Transposase
N5B57_RS24150 (59679) 59679..60383 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
N5B57_RS24155 (60437) 60437..60904 + 468 Protein_71 conjugal transfer protein -
N5B57_RS24160 (61149) 61149..61265 + 117 WP_001814923.1 tetracycline resistance determinant leader peptide -
N5B57_RS24165 (61281) 61281..63200 + 1920 WP_025989258.1 tetracycline resistance ribosomal protection protein Tet(M) VF
N5B57_RS24170 (63319) 63319..63486 + 168 WP_000336323.1 cysteine-rich KTR domain-containing protein -
N5B57_RS24175 (63494) 63494..63724 - 231 WP_136655701.1 hypothetical protein -
N5B57_RS24180 (63827) 63827..65035 - 1209 WP_001352368.1 IS4 family transposase IS10R Transposase
N5B57_RS24185 (65142) 65142..65717 + 576 WP_021538338.1 IS256 family transposase IS406 Transposase
N5B57_RS24190 (65964) 65964..66296 - 333 WP_000800531.1 quaternary ammonium compound efflux SMR transporter QacL -
N5B57_RS24195 (66419) 66419..67257 - 839 Protein_79 Streptomycin 3''-adenylyltransferase ARG
N5B57_RS24200 (67350) 67350..68609 - 1260 WP_000095725.1 chloramphenicol efflux MFS transporter CmlA1 ARG
N5B57_RS24205 (68824) 68824..69662 - 839 Protein_81 Streptomycin 3''-adenylyltransferase ARG
N5B57_RS24210 (69668) 69668..69958 - 291 WP_001336345.1 DUF1010 domain-containing protein -
N5B57_RS24215 (70070) 70070..70567 - 498 WP_001083725.1 IS1595 family transposase ISSsu9 ARG
N5B57_RS24220 (70712) 70712..71725 + 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
N5B57_RS24225 (71928) 71928..72278 + 351 WP_071830595.1 DUF3330 domain-containing protein -
N5B57_RS24230 (72404) 72404..72964 + 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
N5B57_RS24235 (72967) 72967..75918 + 2952 WP_015344976.1 Tn3 family transposase TnpA_TnAs3 Transposase
N5B57_RS24240 (75852) 75852..76328 + 477 WP_223171565.1 hypothetical protein -
N5B57_RS24245 (76413) 76413..77117 - 705 WP_001067784.1 IS6 family transposase IS1006 Transposase
N5B57_RS24250 (77181) 77181..78011 + 831 Protein_90 IS91 family transposase ISVsa3 Transposase
N5B57_RS24255 (78042) 78042..78926 + 885 WP_012728215.1 DUF3363 domain-containing protein -
N5B57_RS24260 (79143) 79143..80357 + 1215 WP_058657119.1 Bicyclomycin resistance protein ARG
N5B57_RS24265 (80385) 80385..80690 + 306 WP_001255015.1 HTH-type transcriptional regulator HdfR VF
N5B57_RS24270 (80802) 80802..82295 + 1494 WP_015344975.1 IS91 family transposase ISVsa3 Transposase
N5B57_RS24275 (82531) 82531..82773 - 243 Protein_95 phosphoglucosamine mutase -
N5B57_RS24280 (82860) 82860..83675 - 816 WP_001043260.1 Dihydropteroate synthase ARG
N5B57_RS24285 (83765) 83765..84855 + 1091 WP_085940648.1 IS4 family transposase ISAba1 Transposase
N5B57_RS24290 (85052) 85052..85339 - 288 WP_230071785.1 hypothetical protein -
N5B57_RS24295 (85587) 85587..86291 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
N5B57_RS24300 (86357) 86357..87871 + 1515 Protein_100 Tn3 family transposase TnpA_TnAs1 Transposase
N5B57_RS24305 (87973) 87973..88230 + 258 WP_231363335.1 hypothetical protein -
N5B57_RS24310 (88339) 88339..89043 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
N5B57_RS24315 (89233) 89233..90048 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
N5B57_RS24320 (90199) 90199..90903 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
N5B57_RS24325 (90955) 90955..91206 + 252 Protein_105 hypothetical protein -
N5B57_RS24330 (91352) 91352..92215 + 864 WP_000612791.1 SDR family oxidoreductase -
N5B57_RS24335 (92253) 92253..92498 + 246 WP_001354008.1 GrpB family protein -
N5B57_RS24340 (92967) 92967..93758 + 792 WP_000034420.1 Dihydropteroate synthase ARG
N5B57_RS24345 (94016) 94016..94516 - 501 Protein_109 serine hydrolase -
N5B57_RS24350 (94569) 94569..95273 - 705 WP_032199621.1 IS6 family transposase IS26 Transposase
N5B57_RS24355 (95338) 95338..95712 + 375 Protein_111 Tn3 family transposase TnpR_Tn3 Transposase
N5B57_RS24360 (95728) 95728..96822 + 1095 WP_272471724.1 hypothetical protein -
N5B57_RS24365 (96970) 96970..97317 - 348 WP_058914894.1 Methyl-accepting chemotaxis protein McpU VF
N5B57_RS24370 (97331) 97331..97654 + 324 Protein_114 transposase -
N5B57_RS24375 (97904) 97904..98779 + 876 WP_032277257.1 Beta-lactamase CTX-M-97 ARG
N5B57_RS24380 (98814) 98814..99782 + 969 WP_000654812.1 IS5 family transposase IS903B Transposase
N5B57_RS24385 (99840) 99840..100901 - 1062 Protein_117 Tn3 family transposase ISEc63 Transposase
N5B57_RS24390 (100957) 100957..101661 - 705 WP_001067834.1 IS6 family transposase IS26 Transposase
N5B57_RS24395 (102156) 102156..102740 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
N5B57_RS24400 (102740) 102740..103978 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
N5B57_RS24405 (103975) 103975..104880 - 906 WP_000219391.1 hypothetical protein ARG
N5B57_RS24410 (105002) 105002..105706 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
N5B57_RS24415 (105813) 105813..106673 + 861 WP_063609971.1 SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
N5B57_RS24420 (106686) 106686..107228 + 543 WP_000587837.1 AAA family ATPase -
N5B57_RS24425 (107710) 107710..107901 - 192 WP_000951934.1 hypothetical protein -
N5B57_RS24430 (107925) 107925..108152 + 228 WP_000248278.1 hypothetical protein -
N5B57_RS24435 (108203) 108203..109339 + 1137 WP_000080861.1 DUF3883 domain-containing protein -
N5B57_RS24440 (109454) 109454..110824 + 1371 WP_000971921.1 IS1182 family transposase ISCfr1 Transposase
N5B57_RS24445 (111645) 111645..112505 + 861 WP_000027057.1 Beta-lactamase TEM ARG
N5B57_RS24450 (112655) 112655..112753 - 99 Protein_130 IS1 family transposase -
N5B57_RS24455 (112782) 112782..114092 - 1311 WP_001262765.1 DUF262 domain-containing protein -
N5B57_RS24460 (114377) 114377..114778 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
N5B57_RS24465 (114711) 114711..114968 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
N5B57_RS24470 (115061) 115061..115714 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
N5B57_RS24475 (116528) 116528..118099 - 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
N5B57_RS24480 (118119) 118119..118466 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
N5B57_RS24485 (118466) 118466..119143 - 678 WP_001682408.1 IS66 family transposase ISCro1 Transposase
N5B57_RS24490 (119360) 119360..120217 - 858 WP_000130646.1 incFII family plasmid replication initiator RepA -
N5B57_RS24495 (120210) 120210..120284 - 75 WP_001365705.1 RepA leader peptide Tap -
N5B57_RS24500 (120522) 120522..120776 - 255 WP_000083830.1 replication regulatory protein RepA -
N5B57_RS24505 (121016) 121016..121606 - 591 WP_000766807.1 DUF2726 domain-containing protein -
N5B57_RS24510 (121644) 121644..121853 - 210 WP_001298565.1 hemolysin expression modulator Hha -
N5B57_RS24515 (121899) 121899..122360 - 462 WP_001233838.1 thermonuclease family protein -
N5B57_RS24520 (122605) 122605..122817 - 213 WP_001309245.1 ANR family transcriptional regulator -
N5B57_RS24525 (122946) 122946..123506 - 561 WP_000139323.1 fertility inhibition protein FinO -
N5B57_RS24530 (123609) 123609..124469 - 861 WP_000704523.1 Quorum-quenching protein AidA VF
N5B57_RS24535 (124528) 124528..125274 - 747 WP_000205725.1 conjugal transfer pilus acetylase TraX -
N5B57_RS24540 (125294) 125294..130564 - 5271 WP_000948354.1 Multifunctional conjugation protein TraI Relaxase
N5B57_RS24545 (130564) 130564..132762 - 2199 WP_000009332.1 type IV conjugative transfer system coupling protein TraD -
N5B57_RS24550 (132813) 132813..133550 - 738 WP_000199905.1 hypothetical protein -
N5B57_RS24555 (133753) 133753..134484 - 732 WP_000782451.1 conjugal transfer complement resistance protein TraT -
N5B57_RS24560 (134533) 134533..135018 - 486 WP_000605870.1 hypothetical protein -
N5B57_RS24565 (135034) 135034..137856 - 2823 WP_001007039.1 conjugal transfer mating-pair stabilization protein TraG -
N5B57_RS24570 (137853) 137853..139226 - 1374 WP_000944331.1 conjugal transfer pilus assembly protein TraH -
N5B57_RS24575 (139213) 139213..139605 - 393 WP_000660699.1 F-type conjugal transfer protein TrbF -
N5B57_RS24580 (139586) 139586..139933 - 348 WP_001309242.1 P-type conjugative transfer protein TrbJ -
N5B57_RS24585 (139863) 139863..140408 - 546 WP_000059831.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
N5B57_RS24590 (140395) 140395..140679 - 285 WP_000624194.1 type-F conjugative transfer system pilin chaperone TraQ -
N5B57_RS24595 (140798) 140798..141142 - 345 WP_000556796.1 conjugal transfer protein TrbA -
N5B57_RS24600 (141156) 141156..141899 - 744 WP_001030371.1 type-F conjugative transfer system pilin assembly protein TraF -
N5B57_RS24605 (141892) 141892..142149 - 258 WP_000864353.1 conjugal transfer protein TrbE -
N5B57_RS24610 (142176) 142176..144026 - 1851 WP_000821856.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
N5B57_RS24615 (144023) 144023..144661 - 639 WP_001080256.1 type-F conjugative transfer system pilin assembly protein TrbC -
N5B57_RS24620 (144670) 144670..144975 - 306 WP_000224416.1 hypothetical protein -
N5B57_RS24625 (145005) 145005..145997 - 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
N5B57_RS24630 (145994) 145994..146626 - 633 WP_001203728.1 type-F conjugative transfer system protein TraW -
N5B57_RS24635 (146623) 146623..147009 - 387 WP_000214084.1 type-F conjugative transfer system protein TrbI -
N5B57_RS24640 (147226) 147226..148434 + 1209 WP_001352368.1 IS4 family transposase IS10R Transposase
N5B57_RS24645 (148449) 148449..150974 - 2526 Protein_169 type IV secretion system protein TraC -
N5B57_RS24650 (151100) 151100..151447 - 348 WP_000836682.1 hypothetical protein -
N5B57_RS24655 (151475) 151475..151693 - 219 WP_000556745.1 hypothetical protein -
N5B57_RS24660 (151773) 151773..152246 - 474 WP_000549568.1 hypothetical protein -
N5B57_RS24665 (152239) 152239..152652 - 414 WP_000549589.1 hypothetical protein -
N5B57_RS24670 (152645) 152645..152866 - 222 WP_001278683.1 conjugal transfer protein TraR -
N5B57_RS24675 (153001) 153001..153516 - 516 WP_000809881.1 type IV conjugative transfer system lipoprotein TraV -
N5B57_RS24680 (153513) 153513..153833 - 321 WP_001057307.1 conjugal transfer protein TrbD -
N5B57_RS24685 (153820) 153820..154386 - 567 WP_000896599.1 conjugal transfer pilus-stabilizing protein TraP -
N5B57_RS24690 (154376) 154376..155827 - 1452 WP_000146675.1 F-type conjugal transfer pilus assembly protein TraB -
N5B57_RS24695 (155827) 155827..156555 - 729 WP_001230772.1 type-F conjugative transfer system secretin TraK -
N5B57_RS24700 (156542) 156542..157108 - 567 WP_000399780.1 type IV conjugative transfer system protein TraE -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance