MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP104366 Location: 3701572..3715545 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Accession: NZ_CP104366 Location: 3701572..3715545 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4533_RS18275 () | 3697143..3699587 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| N4533_RS18280 () | 3699696..3700463 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| N4533_RS18285 () | 3700834..3701241 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| N4533_RS18290 () | 3701572..3702291 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| N4533_RS18295 () | 3702295..3702510 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| N4533_RS18300 () | 3702627..3703574 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| N4533_RS18305 () | 3704066..3704306 | - | 241 | Protein_3580 | PerC family transcriptional regulator | - |
| N4533_RS18310 () | 3704389..3705210 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| N4533_RS18315 () | 3705616..3706086 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| N4533_RS18320 () | 3706108..3708618 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| N4533_RS18325 () | 3708642..3709379 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| N4533_RS18330 () | 3709463..3709975 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| N4533_RS18335 () | 3710725..3711429 | - | 705 | Protein_3586 | integrase core domain-containing protein | - |
| N4533_RS18340 () | 3711482..3711730 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| N4533_RS18345 () | 3711832..3712140 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| N4533_RS18350 () | 3712223..3712339 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3712424..3712846 | - | 423 | - | - | Antitoxin Detail |
| N4533_RS18355 () | 3712581..3712856 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| N4533_RS18360 () | 3712909..3713346 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| N4533_RS18365 () | 3713909..3714355 | - | 447 | WP_000935097.1 | protein SciX | - |
| N4533_RS18370 () | 3714349..3715218 | - | 870 | Protein_3593 | hypothetical protein | VF |
| N4533_RS18375 () | 3715282..3715545 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| N4533_RS18380 () | 3715539..3719633 | - | 4095 | WP_260833653.1 | RHS repeat-associated core domain-containing protein | - |
| N4533_RS18385 () | 3719652..3720098 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |