MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 104244 bp
Accession: NZ_CP103975 Location: 1..104244 Organism: Escherichia coli strain DLI.6n Replicon: plasmid pDLI.6n
Accession: NZ_CP103975 Location: 1..104244 Organism: Escherichia coli strain DLI.6n Replicon: plasmid pDLI.6n
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NZ657_RS24305 (1) | 1..597 | + | 597 | Protein_0 | plasmid replication initiator RepA | - |
| NZ657_RS24310 (649) | 649..1353 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NZ657_RS24315 (1342) | 1342..1686 | + | 345 | Protein_2 | incFII family plasmid replication initiator RepA | - |
| NZ657_RS24320 (2278) | 2278..2418 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| NZ657_RS24325 (2516) | 2516..3169 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| NZ657_RS24330 (3262) | 3262..3519 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NZ657_RS24335 (3452) | 3452..3853 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NZ657_RS24340 (4311) | 4311..5008 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| NZ657_RS24345 (5115) | 5115..5549 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| NZ657_RS24350 (5621) | 5621..5971 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| NZ657_RS24355 (5985) | 5985..6260 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| NZ657_RS24360 (6296) | 6296..6718 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| NZ657_RS24365 (6770) | 6770..8464 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| NZ657_RS24370 (8482) | 8482..8844 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| NZ657_RS24375 (8841) | 8841..9077 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| NZ657_RS24380 (9113) | 9113..9781 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| NZ657_RS24385 (9856) | 9856..10539 | + | 684 | Protein_16 | transposase | - |
| NZ657_RS24390 (10548) | 10548..11408 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| NZ657_RS24395 (11440) | 11440..12639 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| NZ657_RS24400 (12745) | 12745..13395 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NZ657_RS24405 (13427) | 13427..13669 | - | 243 | WP_000844627.1 | transposase | - |
| NZ657_RS24410 (13993) | 13993..14697 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NZ657_RS24415 (14752) | 14752..15063 | + | 312 | Protein_22 | IS110 family transposase IS1618 | Transposase |
| NZ657_RS24420 (15357) | 15357..15527 | + | 171 | Protein_23 | DsbA family protein | - |
| NZ657_RS24425 (15517) | 15517..16023 | + | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| NZ657_RS24430 (16260) | 16260..17021 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| NZ657_RS24435 (17368) | 17368..19254 | + | 1887 | WP_123009678.1 | FTR1 family protein | - |
| NZ657_RS24440 (19295) | 19295..19822 | + | 528 | WP_000178050.1 | iron transporter | - |
| NZ657_RS24445 (19926) | 19926..21305 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| NZ657_RS24450 (21308) | 21308..22591 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| NZ657_RS24455 (22581) | 22581..23711 | + | 1131 | WP_001554947.1 | ABC transporter permease | - |
| NZ657_RS24460 (23716) | 23716..24411 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| NZ657_RS24465 (24398) | 24398..24883 | + | 486 | WP_001554949.1 | TlpA disulfide reductase family protein | - |
| NZ657_RS24470 (24908) | 24908..25393 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| NZ657_RS24475 (25515) | 25515..26147 | + | 633 | Protein_34 | histidine-type phosphatase | - |
| NZ657_RS24480 (26297) | 26297..27275 | - | 979 | Protein_35 | IS5 family transposase | - |
| NZ657_RS24485 (27457) | 27457..28134 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS24490 (28134) | 28134..28481 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS24495 (28501) | 28501..30072 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS24500 (30177) | 30177..30653 | + | 477 | WP_251987295.1 | Serine protease EspC | VF |
| NZ657_RS24510 (31923) | 31923..32957 | - | 1035 | Protein_41 | TonB-dependent receptor plug domain-containing protein | - |
| NZ657_RS24515 (33126) | 33126..33902 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| NZ657_RS24520 (33910) | 33910..34785 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| NZ657_RS24525 (35160) | 35160..35921 | - | 762 | Protein_44 | replication initiation protein | - |
| NZ657_RS24530 (36120) | 36120..36476 | - | 357 | WP_259583040.1 | hypothetical protein | - |
| NZ657_RS24535 (37234) | 37234..38892 | - | 1659 | WP_001529697.1 | FAD-dependent oxidoreductase | - |
| NZ657_RS24540 (39053) | 39053..39400 | + | 348 | WP_023144239.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NZ657_RS24545 (39943) | 39943..40152 | + | 210 | WP_024192676.1 | hypothetical protein | - |
| NZ657_RS24550 (40218) | 40218..40472 | - | 255 | Protein_49 | hypothetical protein | - |
| NZ657_RS24555 (40565) | 40565..41737 | + | 1173 | Protein_50 | IS21 family transposase IS21 | Transposase |
| NZ657_RS24560 (41737) | 41737..42534 | + | 798 | WP_001554960.1 | IS21 family transposase IS21 | Transposase |
| NZ657_RS24565 (42819) | 42819..43043 | + | 225 | WP_259583023.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NZ657_RS24570 (43040) | 43040..43426 | + | 387 | WP_000673985.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NZ657_RS24575 (44204) | 44204..45928 | - | 1725 | WP_001554923.1 | ATM1-type heavy metal exporter | VF |
| NZ657_RS24580 (45928) | 45928..46161 | - | 234 | WP_235718725.1 | lasso peptide biosynthesis B2 protein | - |
| NZ657_RS24585 (46200) | 46200..47168 | + | 969 | WP_094321578.1 | IS5 family transposase IS903B | Transposase |
| NZ657_RS24590 (47210) | 47210..47677 | - | 468 | WP_259583025.1 | hypothetical protein | - |
| NZ657_RS24595 (47677) | 47677..49065 | - | 1389 | WP_259583026.1 | hypothetical protein | - |
| NZ657_RS24600 (49193) | 49193..49381 | - | 189 | WP_000744815.1 | hypothetical protein | - |
| NZ657_RS24605 (49729) | 49729..50019 | + | 291 | WP_072184881.1 | colicin-like pore-forming protein | - |
| NZ657_RS24610 (50037) | 50037..50384 | - | 348 | WP_001554926.1 | colicin E1 family microcin immunity protein | - |
| NZ657_RS24615 (50495) | 50495..50842 | + | 348 | WP_001554927.1 | DUF6404 family protein | - |
| NZ657_RS24620 (50860) | 50860..51456 | - | 597 | WP_001554928.1 | hypothetical protein | - |
| NZ657_RS24625 (51444) | 51444..51713 | - | 270 | WP_001554929.1 | hypothetical protein | - |
| NZ657_RS24630 (52308) | 52308..52526 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NZ657_RS24635 (52528) | 52528..52833 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NZ657_RS24640 (52834) | 52834..53640 | + | 807 | WP_000016968.1 | site-specific integrase | - |
| NZ657_RS24645 (53971) | 53971..55317 | - | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| NZ657_RS24650 (55758) | 55758..56453 | - | 696 | WP_001478804.1 | replication initiation protein | - |
| NZ657_RS24655 (57110) | 57110..58315 | + | 1206 | WP_001442122.1 | Plasmid partition protein A | VF |
| NZ657_RS24660 (58312) | 58312..59283 | + | 972 | WP_001233385.1 | ParB family protein | - |
| NZ657_RS24665 (59420) | 59420..60565 | - | 1146 | Protein_72 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NZ657_RS24670 (60628) | 60628..61626 | + | 999 | WP_000549075.1 | IS91 family transposase ISMno24 | Transposase |
| NZ657_RS24675 (61623) | 61623..62534 | + | 912 | WP_001442123.1 | hypothetical protein | - |
| NZ657_RS24685 (64152) | 64152..64673 | + | 522 | Protein_76 | DUF4198 domain-containing protein | - |
| NZ657_RS24690 (64741) | 64741..66087 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| NZ657_RS24695 (66121) | 66121..66360 | + | 240 | WP_259384719.1 | hypothetical protein | - |
| NZ657_RS24700 (66423) | 66423..67088 | - | 666 | Protein_79 | IS66 family transposase ISEc22 | Transposase |
| NZ657_RS24705 (67150) | 67150..67947 | - | 798 | WP_001554960.1 | IS21 family transposase IS21 | Transposase |
| NZ657_RS24710 (67947) | 67947..69119 | - | 1173 | Protein_81 | IS21 family transposase IS21 | Transposase |
| NZ657_RS24715 (69946) | 69946..70695 | + | 750 | WP_259582998.1 | polymer-forming cytoskeletal protein | - |
| NZ657_RS24720 (71401) | 71401..71934 | - | 534 | WP_259583033.1 | Serine protease EspP | VF |
| NZ657_RS24725 (72049) | 72049..72300 | + | 252 | Protein_84 | IS3 family transposase IS911 | Transposase |
| NZ657_RS24730 (72358) | 72358..73014 | + | 657 | Protein_85 | IS30 family transposase IS30D | Transposase |
| NZ657_RS24735 (73103) | 73103..73468 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| NZ657_RS24740 (73468) | 73468..74655 | + | 1188 | WP_001554936.1 | IS91 family transposase ISEc37 | Transposase |
| NZ657_RS24745 (74841) | 74841..75008 | + | 168 | Protein_88 | hypothetical protein | - |
| NZ657_RS24750 (75024) | 75024..75605 | + | 582 | WP_225090537.1 | DUF2971 domain-containing protein | - |
| NZ657_RS24760 (76948) | 76948..78207 | + | 1260 | Protein_91 | DUF87 domain-containing protein | - |
| NZ657_RS24765 (78204) | 78204..78590 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| NZ657_RS24770 (78587) | 78587..79219 | + | 633 | WP_001203738.1 | type-F conjugative transfer system protein TraW | - |
| NZ657_RS24775 (79216) | 79216..80208 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| NZ657_RS24780 (80217) | 80217..80855 | + | 639 | WP_048267034.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NZ657_RS24785 (80852) | 80852..82711 | + | 1860 | WP_259583003.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NZ657_RS24790 (82740) | 82740..83437 | + | 698 | WP_103215986.1 | IS1 family transposase IS1G | Transposase |
| NZ657_RS24795 (83434) | 83434..83667 | + | 234 | WP_259583036.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NZ657_RS24800 (83654) | 83654..84199 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NZ657_RS24805 (84129) | 84129..84476 | + | 348 | WP_071840683.1 | P-type conjugative transfer protein TrbJ | - |
| NZ657_RS24810 (84457) | 84457..84849 | + | 393 | WP_244588570.1 | F-type conjugal transfer protein TrbF | - |
| NZ657_RS24815 (84836) | 84836..86209 | + | 1374 | WP_014106974.1 | conjugal transfer pilus assembly protein TraH | - |
| NZ657_RS24820 (86206) | 86206..89025 | + | 2820 | WP_259583007.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NZ657_RS24825 (89044) | 89044..89541 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| NZ657_RS24830 (89573) | 89573..90304 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| NZ657_RS24835 (90507) | 90507..91244 | + | 738 | WP_000199904.1 | hypothetical protein | - |
| NZ657_RS24840 (91431) | 91431..93002 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS24845 (93022) | 93022..93369 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS24850 (93369) | 93369..93746 | - | 378 | Protein_109 | IS66 family transposase ISCro1 | Transposase |
| NZ657_RS24855 (93813) | 93813..95159 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| NZ657_RS24860 (95173) | 95173..95484 | - | 312 | Protein_111 | IS66 family insertion sequence element accessory protein TnpB | - |
| NZ657_RS24865 (95539) | 95539..97629 | + | 2091 | Protein_112 | type IV conjugative transfer system coupling protein TraD | - |
| NZ657_RS24870 (97629) | 97629..100304 | + | 2676 | WP_259583009.1 | hypothetical protein | Relaxase |
| NZ657_RS24875 (100324) | 100324..101070 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| NZ657_RS24880 (101125) | 101125..101685 | + | 561 | WP_000139325.1 | fertility inhibition protein FinO | - |
| NZ657_RS24885 (101817) | 101817..102029 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| NZ657_RS24890 (102274) | 102274..102360 | + | 87 | Protein_117 | endonuclease | - |
| NZ657_RS24895 (102541) | 102541..102852 | - | 312 | WP_000802277.1 | hypothetical protein | - |
| - (103148) | 103148..103209 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (103148) | 103148..103209 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (103148) | 103148..103209 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (103148) | 103148..103209 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| NZ657_RS24900 (103253) | 103253..103402 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| NZ657_RS24905 (103686) | 103686..103943 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| NZ657_RS24910 (104046) | 104046..104232 | + | 187 | Protein_121 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|