MGE detailed information
MGE type: Conjugative plasmid MGE length: 132213 bp
Accession: NZ_CP103759 Location: 1..132213 Organism: Escherichia coli strain p10B Replicon: plasmid unnamed1
Accession: NZ_CP103759 Location: 1..132213 Organism: Escherichia coli strain p10B Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYO15_RS23165 (1) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| NYO15_RS23170 (1263) | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| NYO15_RS23175 (2124) | 2124..2303 | - | 180 | WP_072646521.1 | serine/threonine protein kinase | - |
| NYO15_RS23180 (2677) | 2677..3579 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| NYO15_RS23185 (3648) | 3648..4757 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| NYO15_RS23190 (5190) | 5190..6143 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| NYO15_RS23195 (6247) | 6247..6636 | + | 390 | WP_001332050.1 | outer membrane protease | - |
| NYO15_RS23200 (7440) | 7440..7619 | - | 180 | Protein_7 | transposase | - |
| NYO15_RS23205 (7758) | 7758..8971 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| NYO15_RS23210 (9119) | 9119..9387 | - | 269 | Protein_9 | IS3 family transposase ISLad1 | Transposase |
| NYO15_RS23215 (9444) | 9444..10141 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| NYO15_RS23220 (10158) | 10158..10355 | - | 198 | Protein_11 | colicin V | - |
| NYO15_RS23225 (10333) | 10333..10569 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| NYO15_RS23230 (11111) | 11111..11314 | - | 204 | Protein_13 | hypothetical protein | - |
| NYO15_RS23235 (11487) | 11487..11654 | + | 168 | Protein_14 | colicin-B | - |
| NYO15_RS23240 (11672) | 11672..12199 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| NYO15_RS23245 (12443) | 12443..13258 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| NYO15_RS23250 (13308) | 13308..13661 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| NYO15_RS23255 (13839) | 13839..14630 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| NYO15_RS23260 (14627) | 14627..15316 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| NYO15_RS23265 (15360) | 15360..15710 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| NYO15_RS23270 (16264) | 16264..17352 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| NYO15_RS23275 (17354) | 17354..19579 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| NYO15_RS23280 (19629) | 19629..20528 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| NYO15_RS23285 (20518) | 20518..20808 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| NYO15_RS23290 (21104) | 21104..21334 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NYO15_RS23295 (21331) | 21331..21747 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NYO15_RS23300 (21909) | 21909..24047 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| NYO15_RS23305 (24401) | 24401..24658 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| NYO15_RS23310 (24658) | 24658..25248 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| NYO15_RS23315 (25511) | 25511..26971 | + | 1461 | WP_202745975.1 | AAA family ATPase | - |
| NYO15_RS23320 (27259) | 27259..27876 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| NYO15_RS23325 (28274) | 28274..29536 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| NYO15_RS23330 (29792) | 29792..30667 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| NYO15_RS23335 (30714) | 30714..31007 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| NYO15_RS23340 (31224) | 31224..32303 | - | 1080 | WP_001089727.1 | permease | - |
| NYO15_RS23345 (32408) | 32408..32731 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NYO15_RS23350 (32892) | 32892..33212 | + | 321 | Protein_37 | NAD(P)H-dependent oxidoreductase | - |
| NYO15_RS23355 (33265) | 33265..33969 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NYO15_RS23360 (34035) | 34035..35549 | + | 1515 | Protein_39 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NYO15_RS23365 (35607) | 35607..35849 | + | 243 | WP_000844627.1 | transposase | - |
| NYO15_RS23370 (35881) | 35881..36531 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NYO15_RS23375 (36637) | 36637..37836 | + | 1200 | WP_077248803.1 | Tetracycline resistance protein, class C | ARG |
| NYO15_RS23380 (37868) | 37868..38752 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| NYO15_RS23385 (38890) | 38890..39282 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| NYO15_RS23390 (39286) | 39286..40866 | + | 1581 | Protein_45 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| NYO15_RS23395 (40917) | 40917..41621 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NYO15_RS23400 (41687) | 41687..41971 | + | 285 | Protein_47 | IS6 family transposase IS26 | Transposase |
| NYO15_RS23405 (42161) | 42161..42976 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NYO15_RS23410 (43127) | 43127..43831 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NYO15_RS23415 (43938) | 43938..44642 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NYO15_RS23420 (44696) | 44696..45744 | - | 1049 | Protein_51 | IS3 family transposase ISKpn11 | Transposase |
| NYO15_RS23425 (45836) | 45836..46378 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| NYO15_RS23430 (46391) | 46391..47251 | - | 861 | WP_000557452.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| NYO15_RS23435 (47358) | 47358..48062 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| NYO15_RS23440 (48128) | 48128..48673 | + | 546 | Protein_55 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NYO15_RS23445 (48709) | 48709..49124 | - | 416 | Protein_56 | IS1 family transposase | - |
| NYO15_RS23450 (49373) | 49373..49774 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NYO15_RS23455 (49707) | 49707..49964 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NYO15_RS23460 (50057) | 50057..50710 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| NYO15_RS23465 (51649) | 51649..52506 | - | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| NYO15_RS23470 (52499) | 52499..52981 | - | 483 | WP_001273588.1 | hypothetical protein | - |
| NYO15_RS23475 (52974) | 52974..53021 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| NYO15_RS23480 (53012) | 53012..53263 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| NYO15_RS23485 (53280) | 53280..53537 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| NYO15_RS23490 (53821) | 53821..53970 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (54014) | 54014..54075 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (54014) | 54014..54075 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (54014) | 54014..54075 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (54014) | 54014..54075 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| NYO15_RS23495 (54331) | 54331..54405 | - | 75 | Protein_66 | endonuclease | - |
| NYO15_RS23500 (54651) | 54651..54863 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| NYO15_RS23505 (54999) | 54999..55559 | - | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| NYO15_RS23510 (55662) | 55662..56522 | - | 861 | WP_000704513.1 | Quorum-quenching protein AidA | VF |
| NYO15_RS23515 (56581) | 56581..57327 | - | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| NYO15_RS23520 (57347) | 57347..62617 | - | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| NYO15_RS23525 (62699) | 62699..62926 | + | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NYO15_RS23530 (62926) | 62926..63324 | + | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NYO15_RS23535 (63333) | 63333..65486 | - | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| NYO15_RS23540 (65739) | 65739..66470 | - | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| NYO15_RS23545 (66502) | 66502..66999 | - | 498 | WP_000605857.1 | entry exclusion protein | - |
| NYO15_RS23550 (67015) | 67015..69837 | - | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NYO15_RS23555 (69834) | 69834..71207 | - | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| NYO15_RS23560 (71207) | 71207..71587 | - | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| NYO15_RS23565 (71574) | 71574..71915 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| NYO15_RS23570 (71845) | 71845..72390 | - | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NYO15_RS23575 (72377) | 72377..72661 | - | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NYO15_RS23580 (72742) | 72742..73056 | + | 315 | WP_001324103.1 | hypothetical protein | - |
| NYO15_RS23585 (73058) | 73058..73405 | - | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| NYO15_RS23590 (73421) | 73421..74164 | - | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NYO15_RS23595 (74157) | 74157..74414 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| NYO15_RS23600 (74441) | 74441..76249 | - | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NYO15_RS23605 (76246) | 76246..76884 | - | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NYO15_RS23610 (76893) | 76893..77885 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| NYO15_RS23615 (77882) | 77882..78514 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| NYO15_RS23620 (78511) | 78511..78897 | - | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| NYO15_RS23625 (78894) | 78894..81521 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| NYO15_RS23630 (81681) | 81681..81902 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NYO15_RS23635 (82037) | 82037..82552 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NYO15_RS23640 (82549) | 82549..82800 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| NYO15_RS23645 (82812) | 82812..83009 | - | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| NYO15_RS23650 (82996) | 82996..83586 | - | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NYO15_RS23655 (83576) | 83576..85003 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NYO15_RS23660 (85003) | 85003..85731 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NYO15_RS23665 (85718) | 85718..86284 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NYO15_RS23670 (86306) | 86306..86617 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NYO15_RS23675 (86632) | 86632..86997 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| NYO15_RS23680 (87030) | 87030..87431 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| NYO15_RS23685 (87524) | 87524..88213 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| NYO15_RS23690 (88400) | 88400..88783 | - | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NYO15_RS23695 (89104) | 89104..89706 | + | 603 | WP_072156291.1 | hypothetical protein | VF |
| NYO15_RS23700 (90003) | 90003..90824 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| NYO15_RS23705 (90943) | 90943..91230 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| NYO15_RS23710 (91481) | 91481..92485 | + | 1005 | WP_024257664.1 | IS110 family transposase IS1663 | Transposase |
| NYO15_RS23715 (92579) | 92579..92839 | - | 261 | WP_244586445.1 | single-stranded DNA-binding protein | - |
| NYO15_RS23720 (92909) | 92909..93081 | + | 173 | Protein_111 | hypothetical protein | - |
| NYO15_RS23725 (93544) | 93544..93642 | - | 99 | WP_233329041.1 | Hok/Gef family protein | Toxin Detail |
| NYO15_RS23730 (93611) | 93611..93688 | - | 78 | Protein_113 | DUF5431 family protein | - |
| - (93754) | 93754..93902 | - | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (93754) | 93754..93902 | - | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (93754) | 93754..93902 | - | 149 | NuclAT_0 | - | Antitoxin Detail |
| - (93754) | 93754..93902 | - | 149 | NuclAT_0 | - | Antitoxin Detail |
| NYO15_RS23735 (93878) | 93878..94153 | - | 276 | WP_077631319.1 | hypothetical protein | - |
| NYO15_RS23740 (94217) | 94217..95788 | - | 1572 | WP_099588291.1 | IS66 family transposase ISCro1 | Transposase |
| NYO15_RS23745 (95808) | 95808..96155 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| NYO15_RS23750 (96155) | 96155..96802 | - | 648 | WP_001295212.1 | IS66 family transposase ISCro1 | Transposase |
| NYO15_RS23755 (96863) | 96863..97639 | + | 777 | WP_099588290.1 | thiosulfate reductase cytochrome B subunit | - |
| NYO15_RS23760 (97885) | 97885..99279 | - | 1395 | WP_165696052.1 | carbohydrate porin | - |
| NYO15_RS23765 (99341) | 99341..100038 | + | 698 | WP_223216367.1 | IS1 family transposase IS1G | Transposase |
| NYO15_RS23770 (100250) | 100250..101683 | - | 1434 | WP_024170639.1 | glycoside hydrolase family 32 protein | - |
| NYO15_RS23775 (101680) | 101680..102957 | - | 1278 | WP_001083369.1 | MFS transporter | - |
| NYO15_RS23780 (103020) | 103020..105146 | - | 2127 | WP_099588288.1 | alpha-galactosidase | - |
| NYO15_RS23785 (105242) | 105242..106252 | - | 1011 | WP_000053332.1 | substrate-binding domain-containing protein | - |
| NYO15_RS23790 (106410) | 106410..107168 | - | 759 | Protein_125 | site-specific integrase | - |
| NYO15_RS23795 (107259) | 107259..108476 | + | 1218 | Protein_126 | IS3 family transposase IS2 | Transposase |
| NYO15_RS23800 (108461) | 108461..109030 | + | 570 | WP_099588286.1 | hypothetical protein | - |
| NYO15_RS23805 (109498) | 109498..109722 | - | 225 | WP_189658304.1 | single-stranded DNA-binding protein | - |
| NYO15_RS23810 (109792) | 109792..109872 | + | 81 | Protein_129 | hypothetical protein | - |
| NYO15_RS23815 (110055) | 110055..110224 | - | 170 | Protein_130 | hypothetical protein | - |
| NYO15_RS23820 (110861) | 110861..111832 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NYO15_RS23825 (111832) | 111832..112998 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| NYO15_RS23835 (114480) | 114480..116681 | - | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| NYO15_RS23840 (116707) | 116707..118040 | - | 1334 | Protein_135 | L-lysine N6-monooxygenase | VF |
| NYO15_RS23845 (118037) | 118037..119779 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| NYO15_RS23850 (119779) | 119779..120726 | - | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| NYO15_RS23855 (120727) | 120727..122451 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| NYO15_RS23860 (122587) | 122587..123780 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| NYO15_RS23865 (124160) | 124160..124540 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| NYO15_RS23870 (124881) | 124881..125294 | - | 414 | Protein_141 | phosphopyruvate hydratase | - |
| NYO15_RS23875 (125292) | 125292..125549 | + | 258 | Protein_142 | transposase | - |
| NYO15_RS23880 (125783) | 125783..126640 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| NYO15_RS23885 (126637) | 126637..127494 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| NYO15_RS23890 (127491) | 127491..128318 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| NYO15_RS23895 (128318) | 128318..129232 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| NYO15_RS23900 (129588) | 129588..130285 | + | 698 | WP_224158172.1 | IS1 family transposase IS1S | Transposase |
| NYO15_RS23905 (130465) | 130465..130978 | - | 514 | Protein_148 | DUF4113 domain-containing protein | - |
| NYO15_RS23910 (131039) | 131039..131143 | - | 105 | Protein_149 | AAA family ATPase | - |
| NYO15_RS23915 (131145) | 131145..131468 | - | 324 | Protein_150 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|