MGE detailed information
MGE type: Conjugative plasmid MGE length: 83426 bp
Accession: NZ_CP103720 Location: 1..83426 Organism: Escherichia coli strain 1579 Replicon: plasmid pMB3176_2
Accession: NZ_CP103720 Location: 1..83426 Organism: Escherichia coli strain 1579 Replicon: plasmid pMB3176_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5S87_RS26205 () | 1..5271 | + | 5271 | WP_100033384.1 | Multifunctional conjugation protein TraI | Relaxase |
| M5S87_RS26210 () | 5291..6037 | + | 747 | WP_100033383.1 | conjugal transfer pilus acetylase TraX | - |
| M5S87_RS26215 () | 6092..6649 | + | 558 | WP_100033382.1 | fertility inhibition protein FinO | - |
| M5S87_RS26220 () | 7432..9021 | + | 1590 | WP_251704617.1 | YadA-like family protein | - |
| M5S87_RS26225 () | 9023..9484 | + | 462 | WP_021553165.1 | thermonuclease family protein | - |
| M5S87_RS26230 () | 9530..9739 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| M5S87_RS26235 () | 9777..10370 | + | 594 | WP_100033381.1 | DUF2726 domain-containing protein | - |
| M5S87_RS26240 () | 10525..10998 | + | 474 | WP_100033380.1 | hypothetical protein | - |
| - () | 11141..11200 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 11141..11200 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 11141..11200 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 11141..11200 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| M5S87_RS26245 () | 11245..11394 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| M5S87_RS26250 () | 11678..11935 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| M5S87_RS26255 () | 12170..12244 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| M5S87_RS26260 () | 12237..13094 | + | 858 | WP_126303380.1 | incFII family plasmid replication initiator RepA | - |
| M5S87_RS26265 () | 14088..15014 | + | 927 | WP_016230921.1 | HTH-type transcriptional regulator CatM | VF |
| M5S87_RS26270 () | 15111..16514 | + | 1404 | WP_016230922.1 | FAD-dependent tricarballylate dehydrogenase TcuA | - |
| M5S87_RS26275 () | 16501..17640 | + | 1140 | WP_032179954.1 | tricarballylate utilization 4Fe-4S protein TcuB | - |
| M5S87_RS26280 () | 17695..18990 | + | 1296 | WP_032190702.1 | tricarballylate/proton symporter TcuC | - |
| M5S87_RS26285 () | 19304..19517 | + | 214 | Protein_17 | Tn3 family transposase | - |
| M5S87_RS26290 () | 19917..20201 | + | 285 | WP_001674495.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| M5S87_RS26295 () | 20201..20476 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5S87_RS26300 () | 20582..20677 | + | 96 | Protein_20 | hypothetical protein | - |
| M5S87_RS26305 () | 20812..20910 | - | 99 | Protein_21 | proQ/FINO family protein | - |
| M5S87_RS26310 () | 20939..21907 | + | 969 | WP_162745993.1 | IS5 family transposase IS903B | Transposase |
| M5S87_RS26315 () | 21965..22078 | + | 114 | Protein_23 | colicin-like pore-forming protein | - |
| M5S87_RS26320 () | 22100..22435 | - | 336 | WP_181041662.1 | colicin E1 family microcin immunity protein | - |
| M5S87_RS26325 () | 22564..22911 | + | 348 | WP_016230895.1 | DUF6404 family protein | - |
| M5S87_RS26330 () | 22929..23519 | - | 591 | WP_000194548.1 | hypothetical protein | - |
| M5S87_RS26335 () | 23519..23776 | - | 258 | WP_000371887.1 | hypothetical protein | - |
| M5S87_RS26340 () | 24105..24557 | + | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| M5S87_RS26345 () | 24590..26122 | - | 1533 | WP_259411962.1 | NAD(P)-binding domain-containing protein | - |
| M5S87_RS26350 () | 26119..26388 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| M5S87_RS26355 () | 26390..27406 | - | 1017 | WP_016230896.1 | Gfo/Idh/MocA family oxidoreductase | - |
| M5S87_RS26360 () | 27406..28236 | - | 831 | WP_016230897.1 | HAD-IIB family hydrolase | - |
| M5S87_RS26365 () | 28220..29458 | - | 1239 | WP_024195214.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| M5S87_RS26370 () | 30277..30690 | + | 414 | WP_016230899.1 | hypothetical protein | - |
| M5S87_RS26375 () | 30692..31471 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| M5S87_RS26380 () | 31651..32295 | + | 645 | WP_001144036.1 | ParA family protein | - |
| M5S87_RS26385 () | 32382..32690 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| M5S87_RS26390 () | 33104..34084 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| M5S87_RS26395 () | 34077..34493 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| M5S87_RS26400 () | 34495..35769 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| M5S87_RS26405 () | 35769..36206 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| M5S87_RS26410 () | 36203..36451 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| M5S87_RS26415 () | 36869..37771 | + | 903 | WP_077694323.1 | DUF1281 domain-containing protein | - |
| M5S87_RS26420 () | 37768..38079 | + | 312 | WP_032145103.1 | hypothetical protein | - |
| M5S87_RS26425 () | 38156..38839 | + | 684 | WP_021553177.1 | DNA methylase | - |
| M5S87_RS26430 () | 38840..39061 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| M5S87_RS26435 () | 39042..39509 | + | 468 | WP_223723978.1 | DUF1380 family protein | - |
| M5S87_RS26440 () | 39555..40331 | + | 777 | WP_021553179.1 | hypothetical protein | - |
| M5S87_RS26445 () | 40749..41174 | + | 426 | WP_001482475.1 | antirestriction protein | - |
| M5S87_RS26450 () | 41221..41643 | + | 423 | WP_021553180.1 | DUF1380 family protein | - |
| M5S87_RS26455 () | 41640..41831 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| M5S87_RS26460 () | 42870..43100 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| M5S87_RS26465 () | 43152..44513 | + | 1362 | WP_014106968.1 | DUF3560 domain-containing protein | - |
| M5S87_RS26470 () | 44561..45124 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| M5S87_RS26475 () | 45150..45362 | + | 213 | Protein_55 | hypothetical protein | - |
| M5S87_RS26480 () | 45275..45532 | + | 258 | WP_023147917.1 | hypothetical protein | - |
| M5S87_RS26485 () | 45773..45979 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| M5S87_RS26490 () | 46005..46526 | + | 522 | WP_021553184.1 | single-stranded DNA-binding protein | - |
| M5S87_RS26495 () | 46584..46817 | + | 234 | WP_021553185.1 | DUF905 domain-containing protein | - |
| M5S87_RS26500 () | 46881..48845 | + | 1965 | WP_259411958.1 | ParB/RepB/Spo0J family partition protein | - |
| M5S87_RS26505 () | 48914..49348 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| M5S87_RS26510 () | 49345..50107 | + | 763 | Protein_62 | plasmid SOS inhibition protein A | - |
| M5S87_RS26515 () | 50076..50264 | - | 189 | WP_032145107.1 | hypothetical protein | - |
| - () | 50076..50300 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50076..50300 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50076..50300 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50076..50300 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - | 50233..50298 | - | 66 | - | - | Antitoxin Detail |
| M5S87_RS26520 () | 50286..50435 | + | 150 | Protein_64 | plasmid maintenance protein Mok | - |
| M5S87_RS26525 () | 50377..50502 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| M5S87_RS26530 () | 50737..51096 | - | 360 | WP_024223173.1 | hypothetical protein | - |
| M5S87_RS26535 () | 51166..51438 | + | 273 | WP_223724002.1 | single-stranded DNA-binding protein | - |
| M5S87_RS26540 () | 51392..51715 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| M5S87_RS26545 () | 51774..52016 | + | 243 | WP_000540591.1 | hypothetical protein | - |
| M5S87_RS26550 () | 52216..52639 | - | 424 | Protein_70 | hypothetical protein | - |
| M5S87_RS26555 () | 52709..52915 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| M5S87_RS26560 () | 52939..53235 | + | 297 | WP_021553188.1 | hypothetical protein | - |
| M5S87_RS26565 () | 53346..54167 | + | 822 | WP_021553189.1 | DUF932 domain-containing protein | - |
| M5S87_RS26570 () | 54463..54972 | - | 510 | WP_021553190.1 | hypothetical protein | VF |
| M5S87_RS26575 () | 55387..55770 | + | 384 | WP_021553191.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| M5S87_RS26580 () | 55962..56654 | + | 693 | WP_021553192.1 | PAS domain-containing protein | - |
| M5S87_RS26585 () | 56742..56969 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| M5S87_RS26590 () | 57003..57368 | + | 366 | WP_259411959.1 | type IV conjugative transfer system pilin TraA | - |
| M5S87_RS26595 () | 57383..57694 | + | 312 | WP_021553194.1 | type IV conjugative transfer system protein TraL | - |
| M5S87_RS26600 () | 57716..58282 | + | 567 | WP_021553195.1 | type IV conjugative transfer system protein TraE | - |
| M5S87_RS26605 () | 58269..58997 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| M5S87_RS26610 () | 58997..60424 | + | 1428 | WP_000146655.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| M5S87_RS26615 () | 60414..61001 | + | 588 | WP_024223178.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| M5S87_RS26620 () | 60988..61308 | + | 321 | WP_259411960.1 | conjugal transfer protein TrbD | - |
| M5S87_RS26625 () | 61301..61552 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| M5S87_RS26630 () | 61549..62064 | + | 516 | WP_021553199.1 | type IV conjugative transfer system lipoprotein TraV | - |
| M5S87_RS26635 () | 62199..62420 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| M5S87_RS26640 () | 62413..62886 | + | 474 | WP_021553200.1 | hypothetical protein | - |
| M5S87_RS26645 () | 62883..63269 | + | 387 | WP_021553201.1 | hypothetical protein | - |
| M5S87_RS26650 () | 63349..63567 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| M5S87_RS26655 () | 63564..63968 | + | 405 | WP_021553202.1 | hypothetical protein | - |
| M5S87_RS26660 () | 63965..64312 | + | 348 | WP_021553203.1 | hypothetical protein | - |
| M5S87_RS26665 () | 64443..67073 | + | 2631 | WP_021553204.1 | type IV secretion system protein TraC | - |
| M5S87_RS26670 () | 67070..67456 | + | 387 | WP_021553205.1 | type-F conjugative transfer system protein TrbI | - |
| M5S87_RS26675 () | 67453..68085 | + | 633 | WP_021569944.1 | type-F conjugative transfer system protein TraW | - |
| M5S87_RS26680 () | 68082..69074 | + | 993 | WP_000817325.1 | conjugal transfer pilus assembly protein TraU | - |
| M5S87_RS26685 () | 69101..69433 | + | 333 | WP_021553224.1 | hypothetical protein | - |
| M5S87_RS26690 () | 69561..70199 | + | 639 | WP_021553225.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| M5S87_RS26695 () | 70196..72046 | + | 1851 | WP_021553226.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| M5S87_RS26700 () | 72073..72330 | + | 258 | WP_021569945.1 | conjugal transfer protein TrbE | - |
| M5S87_RS26705 () | 72323..73066 | + | 744 | WP_021569946.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| M5S87_RS26710 () | 73080..73442 | + | 363 | WP_021553229.1 | hypothetical protein | - |
| M5S87_RS26715 () | 73573..73974 | + | 402 | WP_021553230.1 | hypothetical protein | - |
| M5S87_RS26720 () | 74041..74322 | + | 282 | WP_000049684.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| M5S87_RS26725 () | 74309..74854 | + | 546 | WP_021553231.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| M5S87_RS26730 () | 74784..75131 | + | 348 | WP_071779959.1 | P-type conjugative transfer protein TrbJ | - |
| M5S87_RS26735 () | 75112..75504 | + | 393 | WP_021553155.1 | F-type conjugal transfer protein TrbF | - |
| M5S87_RS26740 () | 75491..76864 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| M5S87_RS26745 () | 76861..79680 | + | 2820 | WP_259411961.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| M5S87_RS26750 () | 79699..80196 | + | 498 | WP_053285818.1 | entry exclusion protein | - |
| M5S87_RS26755 () | 80228..80959 | + | 732 | WP_042842164.1 | conjugal transfer complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|