MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34668 bp
Accession: NZ_CP103446 Location: 1..34668 Organism: Erwinia pyrifoliae strain CP201486 Replicon: plasmid unnamed
Accession: NZ_CP103446 Location: 1..34668 Organism: Erwinia pyrifoliae strain CP201486 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYP84_RS19290 (NYP84_19290) | 430..1011 | + | 582 | WP_259826335.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NYP84_RS19295 (NYP84_19295) | 1030..1849 | + | 820 | Protein_2 | DUF4225 domain-containing protein | - |
| NYP84_RS19300 (NYP84_19300) | 1827..2156 | - | 330 | WP_041473955.1 | hypothetical protein | - |
| NYP84_RS19305 (NYP84_19305) | 3333..3869 | + | 537 | WP_011114009.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| NYP84_RS19310 (NYP84_19310) | 4667..5293 | + | 627 | WP_011078071.1 | Iron-sulfur cluster carrier protein | VF |
| NYP84_RS19315 (NYP84_19315) | 5290..5502 | + | 213 | WP_014540014.1 | plasmid partition protein ParG | - |
| NYP84_RS19320 (NYP84_19320) | 6749..7726 | + | 978 | WP_259818176.1 | replication initiation protein | - |
| NYP84_RS19325 (NYP84_19325) | 8004..8345 | + | 342 | WP_014539990.1 | IS3 family transposase ISAs17 | Transposase |
| NYP84_RS19330 (NYP84_19330) | 8376..8523 | - | 148 | Protein_9 | IS3 family transposase | - |
| NYP84_RS19335 (NYP84_19335) | 8596..9804 | + | 1209 | WP_012814645.1 | IS256 family transposase ISEc39 | Transposase |
| NYP84_RS19340 (NYP84_19340) | 9901..10329 | - | 429 | Protein_11 | transposase | - |
| NYP84_RS19345 (NYP84_19345) | 10984..11388 | - | 405 | WP_011113994.1 | H-NS family nucleoid-associated regulatory protein | - |
| NYP84_RS19350 (NYP84_19350) | 12171..13109 | - | 939 | WP_012814643.1 | Coagulase/fibrinolysin | VF |
| NYP84_RS19355 (NYP84_19355) | 13317..14174 | - | 858 | WP_012814642.1 | LysR family transcriptional regulator | - |
| NYP84_RS19360 (NYP84_19360) | 14315..15703 | + | 1389 | WP_041473957.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| NYP84_RS19365 (NYP84_19365) | 16003..17559 | - | 1557 | WP_041473953.1 | hypothetical protein | VF |
| NYP84_RS19370 (NYP84_19370) | 18067..18480 | - | 414 | WP_011113999.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| NYP84_RS19375 (NYP84_19375) | 18481..18795 | - | 315 | WP_041473956.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| NYP84_RS19380 (NYP84_19380) | 19059..19343 | - | 285 | WP_011078079.1 | VF530 family DNA-binding protein | - |
| NYP84_RS19385 (NYP84_19385) | 19503..19790 | - | 288 | WP_011078058.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP84_RS19390 (NYP84_19390) | 19780..20034 | - | 255 | WP_011078059.1 | plasmid stabilization protein | Antitoxin Detail |
| NYP84_RS19395 (NYP84_19395) | 20245..21210 | - | 966 | WP_011078060.1 | ThiF family adenylyltransferase | - |
| NYP84_RS19400 (NYP84_19400) | 21226..21984 | - | 759 | WP_012814638.1 | thiazole synthase | - |
| NYP84_RS19405 (NYP84_19405) | 21988..22185 | - | 198 | WP_012814637.1 | sulfur carrier protein ThiS | - |
| NYP84_RS19410 (NYP84_19410) | 22182..23114 | - | 933 | WP_041473952.1 | FAD-dependent oxidoreductase | - |
| NYP84_RS19415 (NYP84_19415) | 23490..23651 | - | 162 | Protein_26 | Txe/YoeB family addiction module toxin | - |
| NYP84_RS19420 (NYP84_19420) | 23831..24415 | + | 585 | WP_259818180.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| NYP84_RS19425 (NYP84_19425) | 24742..25401 | + | 660 | WP_041473951.1 | class I SAM-dependent methyltransferase | - |
| NYP84_RS19430 (NYP84_19430) | 25786..27816 | - | 2031 | WP_011114006.1 | choline transporter | - |
| NYP84_RS19435 (NYP84_19435) | 28229..28398 | + | 170 | Protein_30 | Rpn family recombination-promoting nuclease/putative transposase | - |
| NYP84_RS19440 (NYP84_19440) | 29454..30266 | - | 813 | WP_259818179.1 | Methionine-binding lipoprotein MetQ | VF |
| NYP84_RS19445 (NYP84_19445) | 30286..30954 | - | 669 | WP_012814635.1 | methionine ABC transporter permease | - |
| NYP84_RS19450 (NYP84_19450) | 30947..31927 | - | 981 | WP_259818178.1 | Methionine import ATP-binding protein MetN | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia pyrifoliae Ep1/96 | Non-Mobilizable plasmid | TA6130 | NC_004445 | 1..35904 | 0.005 |