MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 105437 bp
Accession: NZ_CP102948 Location: 1..105437 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: plasmid unnamed1
Accession: NZ_CP102948 Location: 1..105437 Organism: Escherichia coli strain SCAID WND1-2022 (119) Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NW339_RS24625 (613) | 613..1389 | + | 777 | WP_103818141.1 | hypothetical protein | - |
| NW339_RS24630 (1386) | 1386..3619 | + | 2234 | Protein_2 | type IV conjugative transfer system coupling protein TraD | - |
| NW339_RS24635 (3619) | 3619..8889 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| NW339_RS24640 (8909) | 8909..9655 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| NW339_RS24645 (9710) | 9710..10270 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| NW339_RS24650 (10401) | 10401..10613 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| NW339_RS24655 (11172) | 11172..11597 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| NW339_RS24660 (11594) | 11594..11944 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| NW339_RS24665 (11975) | 11975..13588 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| NW339_RS24670 (13666) | 13666..13952 | + | 287 | Protein_10 | DUF2726 domain-containing protein | - |
| - (13919) | 13919..13979 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (13919) | 13919..13979 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (13919) | 13919..13979 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (13919) | 13919..13979 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| NW339_RS24675 (14024) | 14024..14158 | + | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| NW339_RS24680 (14455) | 14455..14709 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| NW339_RS24685 (14815) | 14815..14946 | + | 132 | Protein_13 | protein CopA/IncA | - |
| NW339_RS24690 (14946) | 14946..15020 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| NW339_RS24695 (15013) | 15013..15870 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| NW339_RS24700 (16810) | 16810..17463 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| NW339_RS24705 (17556) | 17556..17813 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NW339_RS24710 (17746) | 17746..18147 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NW339_RS24715 (18396) | 18396..18811 | + | 416 | Protein_19 | IS1 family transposase | - |
| NW339_RS24720 (18847) | 18847..19392 | - | 546 | Protein_20 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NW339_RS24725 (19458) | 19458..20162 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NW339_RS24730 (20476) | 20476..21351 | + | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| NW339_RS24735 (21386) | 21386..21748 | + | 363 | Protein_23 | IS5 family transposase IS903B | Transposase |
| NW339_RS24740 (21808) | 21808..22512 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NW339_RS24745 (22562) | 22562..22780 | - | 219 | Protein_25 | IS4 family transposase | - |
| NW339_RS24755 (23692) | 23692..23805 | + | 114 | Protein_27 | IS6 family transposase | - |
| NW339_RS24760 (23943) | 23943..24113 | + | 171 | Protein_28 | DsbA family protein | - |
| NW339_RS24765 (24103) | 24103..24609 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| NW339_RS24770 (24845) | 24845..25607 | + | 763 | Protein_30 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| NW339_RS24775 (25882) | 25882..26171 | + | 290 | Protein_31 | IS66 family transposase IS682 | Transposase |
| - (26496) | 26496..26555 | - | 60 | NuclAT_1 | - | - |
| - (26496) | 26496..26555 | - | 60 | NuclAT_1 | - | - |
| - (26496) | 26496..26555 | - | 60 | NuclAT_1 | - | - |
| - (26496) | 26496..26555 | - | 60 | NuclAT_1 | - | - |
| NW339_RS24780 (26250) | 26250..26662 | + | 413 | Protein_32 | hypothetical protein | - |
| NW339_RS24785 (27028) | 27028..27282 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| NW339_RS24790 (27388) | 27388..27519 | + | 132 | Protein_34 | protein CopA/IncA | - |
| NW339_RS24795 (27519) | 27519..27593 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| NW339_RS24800 (27586) | 27586..28443 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| NW339_RS24805 (29382) | 29382..30035 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| NW339_RS24810 (30128) | 30128..30385 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| NW339_RS24815 (30318) | 30318..30719 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| NW339_RS24820 (30968) | 30968..31383 | + | 416 | Protein_40 | IS1 family transposase | - |
| NW339_RS24825 (31419) | 31419..31964 | - | 546 | Protein_41 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NW339_RS24830 (32030) | 32030..32734 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NW339_RS24835 (33048) | 33048..33923 | + | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| NW339_RS24840 (33958) | 33958..34320 | + | 363 | Protein_44 | IS5 family transposase IS903B | Transposase |
| NW339_RS24845 (34380) | 34380..35084 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| NW339_RS24850 (35134) | 35134..35352 | - | 219 | Protein_46 | IS4 family transposase | - |
| NW339_RS24860 (36264) | 36264..36377 | + | 114 | Protein_48 | IS6 family transposase | - |
| NW339_RS24865 (36515) | 36515..36685 | + | 171 | Protein_49 | DsbA family protein | - |
| NW339_RS24870 (36675) | 36675..37181 | + | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| NW339_RS24875 (37418) | 37418..38179 | + | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| NW339_RS24880 (38526) | 38526..40412 | + | 1887 | WP_000118029.1 | FTR1 family protein | - |
| NW339_RS24885 (40453) | 40453..40980 | + | 528 | WP_000178050.1 | iron transporter | - |
| NW339_RS24890 (41084) | 41084..42463 | + | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| NW339_RS24895 (42466) | 42466..43749 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| NW339_RS24900 (43739) | 43739..44869 | + | 1131 | WP_000729218.1 | ABC transporter permease | - |
| NW339_RS24905 (44874) | 44874..45569 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| NW339_RS24910 (45556) | 45556..46041 | + | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| NW339_RS24915 (46066) | 46066..46551 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| NW339_RS24920 (46673) | 46673..47306 | + | 634 | Protein_60 | histidine-type phosphatase | - |
| NW339_RS24925 (47456) | 47456..47629 | - | 174 | Protein_61 | IS5 family transposase ISKpn26 | Transposase |
| NW339_RS24930 (47630) | 47630..47944 | - | 315 | Protein_62 | IS5 family transposase ISKpn26 | Transposase |
| NW339_RS24935 (48617) | 48617..49356 | - | 740 | Protein_63 | IS3 family transposase IS629 | Transposase |
| NW339_RS24940 (49382) | 49382..49687 | + | 306 | Protein_64 | IS91 family transposase ISSbo1 | Transposase |
| NW339_RS24945 (50210) | 50210..51385 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| NW339_RS24950 (51454) | 51454..53715 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| NW339_RS24955 (53884) | 53884..54660 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| NW339_RS24960 (54668) | 54668..55543 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| NW339_RS24965 (55917) | 55917..56542 | - | 626 | Protein_69 | replication initiation protein | - |
| NW339_RS24970 (57994) | 57994..58329 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| NW339_RS24975 (58458) | 58458..58805 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| NW339_RS24980 (58825) | 58825..59334 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| NW339_RS24985 (59331) | 59331..59591 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| NW339_RS24990 (59693) | 59693..60432 | + | 740 | Protein_74 | IS3 family transposase IS629 | Transposase |
| NW339_RS24995 (61105) | 61105..62613 | + | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| NW339_RS25000 (62697) | 62697..63035 | + | 339 | Protein_76 | IS3 family transposase IS629 | Transposase |
| NW339_RS25005 (63115) | 63115..63519 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| NW339_RS25010 (63516) | 63516..63863 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| NW339_RS25015 (63912) | 63912..64857 | + | 946 | Protein_79 | IS66 family transposase ISEc8 | Transposase |
| NW339_RS25020 (64943) | 64943..65965 | + | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| NW339_RS25025 (65962) | 65962..66744 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| NW339_RS25030 (66812) | 66812..67420 | + | 609 | Protein_82 | IS66 family transposase ISEc22 | Transposase |
| NW339_RS25035 (67483) | 67483..68274 | - | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| NW339_RS25040 (68281) | 68281..70251 | - | 1971 | WP_001298664.1 | Hemin receptor | VF |
| NW339_RS25045 (70533) | 70533..70972 | + | 440 | Protein_85 | IS3 family transposase IS2 | Transposase |
| NW339_RS25050 (71494) | 71494..71766 | + | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| NW339_RS25055 (72212) | 72212..72387 | + | 176 | Protein_87 | IS3 family transposase | - |
| NW339_RS25060 (72613) | 72613..73782 | - | 1170 | WP_001072358.1 | hypothetical protein | - |
| NW339_RS25065 (74149) | 74149..74337 | + | 189 | WP_001309252.1 | hypothetical protein | - |
| NW339_RS25070 (74458) | 74458..75198 | + | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| NW339_RS25075 (75483) | 75483..76460 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| NW339_RS25080 (77216) | 77216..78187 | + | 972 | Protein_92 | hypothetical protein | - |
| NW339_RS25085 (78346) | 78346..78504 | - | 159 | WP_228955855.1 | abortive infection family protein | - |
| NW339_RS25090 (78652) | 78652..79349 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| NW339_RS25095 (79365) | 79365..79694 | + | 330 | Protein_95 | TOBE domain-containing protein | - |
| NW339_RS25100 (79803) | 79803..80735 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| NW339_RS25105 (80722) | 80722..82125 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| NW339_RS25110 (82369) | 82369..83349 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| NW339_RS25115 (83559) | 83559..83909 | + | 351 | WP_233291431.1 | type I deoxyribonuclease HsdR | - |
| NW339_RS25120 (83844) | 83844..84257 | - | 414 | Protein_100 | IS3 family transposase ISLad1 | Transposase |
| NW339_RS25125 (84262) | 84262..84540 | - | 279 | Protein_101 | pdcB | - |
| NW339_RS25130 (84568) | 84568..84747 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| NW339_RS25135 (84752) | 84752..85132 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NW339_RS25140 (85132) | 85132..85353 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NW339_RS25145 (85536) | 85536..86792 | + | 1257 | Protein_105 | type I restriction-modification system subunit M | - |
| NW339_RS25150 (86844) | 86844..87541 | + | 698 | WP_223216377.1 | IS1 family transposase IS1G | Transposase |
| NW339_RS25155 (87678) | 87678..88571 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| NW339_RS25160 (88614) | 88614..89609 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| NW339_RS25165 (90317) | 90317..90535 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NW339_RS25170 (90537) | 90537..90842 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NW339_RS25175 (90843) | 90843..91649 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| NW339_RS25180 (92423) | 92423..93178 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| NW339_RS25185 (93766) | 93766..94932 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| NW339_RS25190 (94932) | 94932..95903 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NW339_RS25195 (96770) | 96770..97672 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| NW339_RS25200 (97669) | 97669..97980 | + | 312 | WP_032143366.1 | hypothetical protein | - |
| NW339_RS25205 (98057) | 98057..98740 | + | 684 | WP_000086185.1 | DNA methylase | - |
| NW339_RS25210 (98741) | 98741..98962 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| NW339_RS25215 (98892) | 98892..99410 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| NW339_RS25220 (99461) | 99461..100237 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| NW339_RS25225 (100654) | 100654..101079 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| NW339_RS25230 (101126) | 101126..101548 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| NW339_RS25235 (101545) | 101545..101736 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| NW339_RS25240 (102771) | 102771..103001 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| NW339_RS25245 (103053) | 103053..104414 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| NW339_RS25250 (104462) | 104462..105025 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| NW339_RS25255 (105110) | 105110..105286 | - | 177 | Protein_127 | pilus protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|