MGE detailed information
MGE type: Genomic_island MGE length: 11005 bp
Accession: NZ_CP102716 Location: 2430309..2441313 Organism: Lacticaseibacillus rhamnosus strain DM065 Replicon: chromosome
Accession: NZ_CP102716 Location: 2430309..2441313 Organism: Lacticaseibacillus rhamnosus strain DM065 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHB23_RS11225 (NHB23_011225) | 2426279..2426566 | + | 288 | WP_005691648.1 | hypothetical protein | - |
| NHB23_RS11230 (NHB23_011230) | 2426778..2428511 | - | 1734 | WP_005691647.1 | pyruvate oxidase | - |
| NHB23_RS11235 (NHB23_011235) | 2429100..2429981 | + | 882 | WP_005684263.1 | class II fructose-1,6-bisphosphate aldolase | - |
| NHB23_RS11240 (NHB23_011240) | 2430110..2430328 | - | 219 | WP_005691646.1 | hypothetical protein | - |
| NHB23_RS11245 (NHB23_011245) | 2430560..2431741 | - | 1182 | WP_014571132.1 | RNA-guided endonuclease TnpB family protein | - |
| NHB23_RS11250 (NHB23_011250) | 2431776..2432372 | - | 597 | WP_005691643.1 | IS607 family transposase ISCbt3 | Transposase |
| NHB23_RS11255 (NHB23_011255) | 2432515..2433090 | - | 576 | WP_014571131.1 | DNA-3-methyladenine glycosylase I | - |
| NHB23_RS11260 (NHB23_011260) | 2433244..2434407 | - | 1164 | WP_005691640.1 | MFS transporter | - |
| NHB23_RS11265 (NHB23_011265) | 2434489..2434782 | - | 294 | WP_005684269.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NHB23_RS11270 (NHB23_011270) | 2435025..2435273 | - | 249 | WP_005691639.1 | hypothetical protein | - |
| NHB23_RS11275 (NHB23_011275) | 2435835..2436107 | + | 273 | WP_014571130.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| NHB23_RS11280 (NHB23_011280) | 2436135..2436320 | + | 186 | WP_005691636.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| NHB23_RS11285 (NHB23_011285) | 2436544..2437959 | + | 1416 | WP_005691634.1 | exonuclease domain-containing protein | - |
| NHB23_RS11290 (NHB23_011290) | 2438202..2439077 | - | 876 | WP_024305787.1 | XRE family transcriptional regulator | - |
| NHB23_RS11295 (NHB23_011295) | 2439524..2440132 | + | 609 | WP_005691630.1 | hypothetical protein | - |
| NHB23_RS11300 (NHB23_011300) | 2440624..2441313 | - | 690 | WP_005691628.1 | rhomboid family intramembrane serine protease | - |
| NHB23_RS11305 (NHB23_011305) | 2441843..2442271 | + | 429 | WP_005691626.1 | OsmC family protein | - |
| NHB23_RS11310 (NHB23_011310) | 2442464..2443483 | + | 1020 | WP_005691624.1 | dihydroxyacetone kinase subunit DhaK | - |
| NHB23_RS11315 (NHB23_011315) | 2443470..2444051 | + | 582 | WP_005691622.1 | dihydroxyacetone kinase subunit DhaL | - |
| NHB23_RS11320 (NHB23_011320) | 2444200..2444568 | + | 369 | WP_005686376.1 | dihydroxyacetone kinase phosphoryl donor subunit DhaM | - |
| NHB23_RS11325 (NHB23_011325) | 2444658..2445224 | + | 567 | WP_005691618.1 | TetR/AcrR family transcriptional regulator | - |
| NHB23_RS11330 (NHB23_011330) | 2445310..2445441 | + | 132 | WP_005714982.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Lactobacillus rhamnosus Lc 705 | Genomic island | TA6139 | NC_013199 | 509097..519119 | 0.003 | |
| Lactobacillus rhamnosus ATCC 8530 | Genomic island | TA6144, TA6239 | NC_017491 | 509273..519295 | 0.004 |