MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP102669 Location: 3798332..3812305 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Accession: NZ_CP102669 Location: 3798332..3812305 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATCC 14028 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUW86_RS18915 () | 3793903..3796347 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NUW86_RS18920 () | 3796456..3797223 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NUW86_RS18925 () | 3797594..3798001 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NUW86_RS18930 () | 3798332..3799051 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| NUW86_RS18935 () | 3799055..3799270 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NUW86_RS18940 () | 3799387..3800334 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NUW86_RS18945 () | 3800826..3801066 | - | 241 | Protein_3707 | PerC family transcriptional regulator | - |
| NUW86_RS18950 () | 3801149..3801970 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NUW86_RS18955 () | 3802376..3802846 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NUW86_RS18960 () | 3802868..3805378 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| NUW86_RS18965 () | 3805402..3806139 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| NUW86_RS18970 () | 3806223..3806735 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| NUW86_RS18975 () | 3807485..3808189 | - | 705 | Protein_3713 | integrase core domain-containing protein | - |
| NUW86_RS18980 () | 3808242..3808490 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NUW86_RS18985 () | 3808592..3808900 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| NUW86_RS18990 () | 3808983..3809099 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3809184..3809606 | - | 423 | - | - | Antitoxin Detail |
| NUW86_RS18995 () | 3809341..3809616 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| NUW86_RS19000 () | 3809669..3810106 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NUW86_RS19005 () | 3810669..3811115 | - | 447 | WP_000935097.1 | protein SciX | - |
| NUW86_RS19010 () | 3811109..3811978 | - | 870 | Protein_3720 | hypothetical protein | VF |
| NUW86_RS19015 () | 3812042..3812305 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NUW86_RS19020 () | 3812299..3816393 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NUW86_RS19025 () | 3816412..3816858 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |