MGE detailed information
MGE type: Prophage MGE length: 38301 bp
Accession: NZ_CP101907 Location: 284727..323027 Organism: Salmonella enterica subsp. enterica strain QA-1986 973 Replicon: chromosome
Accession: NZ_CP101907 Location: 284727..323027 Organism: Salmonella enterica subsp. enterica strain QA-1986 973 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NP441_RS01490 () | 281000..281641 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| NP441_RS01495 () | 281741..282919 | - | 1179 | WP_058653155.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| NP441_RS01500 () | 283050..283340 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| NP441_RS01505 () | 283408..283761 | + | 354 | WP_001042119.1 | protein YebF | - |
| NP441_RS01510 () | 283855..284514 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| NP441_RS01515 () | 284727..286778 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| NP441_RS01520 () | 286813..287511 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| NP441_RS01525 () | 287535..288191 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| NP441_RS01530 () | 288299..288529 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| NP441_RS01535 () | 288667..289041 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| NP441_RS01540 () | 289042..289917 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| NP441_RS01545 () | 289934..290287 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 290387..290532 | - | 146 | - | - | Antitoxin Detail |
| - | 290427..290530 | + | 104 | - | - | Toxin Detail |
| NP441_RS01550 () | 290661..291584 | - | 924 | Protein_301 | hypothetical protein ; Integrase | Integrase |
| NP441_RS01555 () | 291848..292309 | - | 462 | Protein_302 | DNA breaking-rejoining protein | - |
| NP441_RS01560 () | 292298..292489 | + | 192 | Protein_303 | glycoside hydrolase family 19 protein | - |
| NP441_RS01565 () | 292543..293076 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| NP441_RS01570 () | 293333..293500 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| NP441_RS01575 () | 293565..293753 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| NP441_RS01580 () | 293808..294068 | + | 261 | Protein_307 | DUF1441 family protein | - |
| NP441_RS01585 () | 294283..294627 | + | 345 | Protein_308 | macro domain-containing protein | - |
| NP441_RS01590 () | 294637..295107 | + | 471 | Protein_309 | tail fiber assembly protein | - |
| NP441_RS01595 () | 295204..295404 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| NP441_RS01600 () | 295794..295974 | - | 181 | Protein_311 | IS3 family transposase | - |
| NP441_RS01605 () | 295965..296066 | + | 102 | Protein_312 | arsenic transporter | - |
| NP441_RS01610 () | 296688..296920 | + | 233 | Protein_313 | helix-turn-helix domain-containing protein | - |
| NP441_RS01615 () | 297247..297861 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| NP441_RS01620 () | 297871..298029 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| NP441_RS01625 () | 298162..299076 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| NP441_RS01630 () | 300371..300793 | - | 423 | Protein_317 | hypothetical protein ; Integrase | Integrase |
| NP441_RS01635 () | 300863..302057 | + | 1195 | Protein_318 | IS256 family transposase IS285 | Transposase |
| NP441_RS01640 () | 302203..302343 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| NP441_RS01645 () | 302509..302778 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| NP441_RS01650 () | 303148..303567 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| NP441_RS01655 () | 303955..304431 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| NP441_RS01660 () | 304761..305156 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| NP441_RS01665 () | 305840..306562 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| NP441_RS01670 () | 306847..307011 | + | 165 | WP_001134856.1 | membrane protein | - |
| NP441_RS01675 () | 307235..307885 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| NP441_RS01680 () | 307904..308095 | - | 192 | WP_000457836.1 | YebW family protein | - |
| NP441_RS01685 () | 308206..308442 | - | 237 | WP_024131108.1 | YebV family protein | - |
| NP441_RS01690 () | 308560..309999 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| NP441_RS01695 () | 310077..312710 | - | 2634 | WP_001535256.1 | Intermembrane transport protein YebT | VF |
| NP441_RS01700 () | 312679..313962 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| NP441_RS01705 () | 314091..314588 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| NP441_RS01710 () | 314686..315372 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| NP441_RS01715 () | 315392..317440 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| NP441_RS01720 () | 317634..318515 | + | 882 | WP_000984498.1 | protease HtpX | - |
| NP441_RS01725 () | 318563..319936 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| NP441_RS01730 () | 320112..320903 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| NP441_RS01735 () | 321115..321354 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| NP441_RS01740 () | 321512..321655 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| NP441_RS01745 () | 321726..322013 | + | 288 | WP_001000660.1 | YebO family protein | - |
| NP441_RS01750 () | 322662..322805 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| NP441_RS01755 () | 322818..323027 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| NP441_RS01760 () | 323247..324992 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| NP441_RS01765 () | 325058..325867 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| NP441_RS01770 () | 325864..326430 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| NP441_RS01775 () | 326840..327298 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0 |