MGE detailed information
MGE type: Genomic_island MGE length: 43619 bp
Accession: NZ_CP101689 Location: 3583204..3626822 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SMEH Replicon: chromosome
Accession: NZ_CP101689 Location: 3583204..3626822 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain SMEH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NOV91_RS17300 () | 3579102..3579392 | + | 291 | WP_000175471.1 | hypothetical protein | - |
| NOV91_RS17305 () | 3579454..3579996 | + | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| NOV91_RS17310 () | 3580020..3581528 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NOV91_RS17315 () | 3581591..3581701 | + | 111 | WP_077907261.1 | BPSL0067 family protein | - |
| NOV91_RS17320 () | 3581828..3582160 | + | 333 | WP_077905251.1 | hypothetical protein | - |
| NOV91_RS17325 () | 3582414..3582899 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| NOV91_RS17330 () | 3582967..3583161 | + | 195 | Protein_3372 | type VI secretion system lipoprotein TssJ | - |
| NOV91_RS17335 () | 3583204..3583689 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| NOV91_RS17340 () | 3583674..3584057 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NOV91_RS17345 () | 3584200..3584685 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| NOV91_RS17350 () | 3584752..3585288 | + | 537 | WP_001007104.1 | hypothetical protein | VF |
| NOV91_RS17355 () | 3585292..3586635 | + | 1344 | WP_017442155.1 | hypothetical protein | VF |
| NOV91_RS17360 () | 3586632..3587936 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| NOV91_RS17365 () | 3587941..3588714 | + | 774 | WP_017442156.1 | Rap1a/Tai family immunity protein | - |
| NOV91_RS17370 () | 3588916..3589347 | + | 432 | WP_077907262.1 | Shiga toxin A subunit | - |
| NOV91_RS17375 () | 3589381..3593250 | + | 3870 | WP_017442158.1 | hypothetical protein | VF |
| NOV91_RS17380 () | 3593250..3594017 | + | 768 | WP_001254130.1 | TagF domain-containing protein | - |
| NOV91_RS17385 () | 3594060..3594530 | + | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| NOV91_RS17390 () | 3594515..3594976 | + | 462 | WP_023218482.1 | hypothetical protein | - |
| NOV91_RS17395 () | 3595012..3595107 | + | 96 | Protein_3385 | cytoplasmic protein | - |
| NOV91_RS17400 () | 3595104..3595520 | + | 417 | WP_000759645.1 | DUF2195 family protein | - |
| NOV91_RS17405 () | 3595544..3596065 | + | 522 | WP_077907259.1 | DUF2778 domain-containing protein | - |
| NOV91_RS17410 () | 3596461..3598695 | + | 2235 | WP_017442160.1 | hypothetical protein | VF |
| NOV91_RS17415 () | 3598755..3599213 | + | 459 | WP_000186513.1 | DcrB-related protein | - |
| NOV91_RS17420 () | 3599229..3603914 | + | 4686 | WP_017442161.1 | hypothetical protein | VF |
| NOV91_RS17425 () | 3603919..3604197 | + | 279 | WP_017442162.1 | hypothetical protein | - |
| NOV91_RS17430 () | 3604244..3604450 | - | 207 | WP_026080916.1 | SymE family type I addiction module toxin | Toxin Detail |
| NOV91_RS17435 () | 3604444..3605697 | + | 1254 | Protein_3393 | Putative deoxyribonuclease RhsC | VF |
| NOV91_RS17440 () | 3605700..3605987 | + | 288 | WP_017442165.1 | hypothetical protein | - |
| NOV91_RS17445 () | 3606056..3606190 | - | 135 | Protein_3395 | type I toxin-antitoxin system SymE family toxin | - |
| NOV91_RS17450 () | 3606616..3607584 | + | 969 | Protein_3396 | hypothetical protein | VF |
| NOV91_RS17455 () | 3607578..3608024 | + | 447 | WP_000935097.1 | protein SciX | - |
| NOV91_RS17460 () | 3608543..3609025 | + | 483 | WP_017442170.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NOV91_RS17465 () | 3609078..3609305 | - | 228 | WP_017442171.1 | SymE family type I addiction module toxin | Toxin Detail |
| NOV91_RS17470 () | 3609488..3609604 | + | 117 | Protein_3400 | RHS repeat-associated core domain-containing protein | - |
| NOV91_RS17475 () | 3609719..3610000 | + | 282 | WP_176132412.1 | hypothetical protein | - |
| NOV91_RS17480 () | 3609997..3610443 | + | 447 | WP_017442172.1 | hypothetical protein | - |
| NOV91_RS17485 () | 3610802..3610954 | + | 153 | WP_223195354.1 | hypothetical protein | - |
| NOV91_RS17490 () | 3610975..3611253 | + | 279 | WP_197398372.1 | hypothetical protein | - |
| NOV91_RS17495 () | 3611255..3611833 | + | 579 | WP_017442174.1 | hypothetical protein | - |
| NOV91_RS17500 () | 3612038..3612415 | + | 378 | WP_223195355.1 | HNH endonuclease | - |
| NOV91_RS17505 () | 3612412..3612768 | + | 357 | WP_017442175.1 | hypothetical protein | - |
| NOV91_RS17510 () | 3612835..3613080 | - | 246 | WP_017442176.1 | hypothetical protein | Toxin Detail |
| - | 3612930..3613237 | + | 308 | - | - | Antitoxin Detail |
| NOV91_RS17515 () | 3613414..3613707 | + | 294 | WP_129369132.1 | hypothetical protein | - |
| NOV91_RS17520 () | 3614157..3614528 | + | 372 | WP_223195353.1 | hypothetical protein | - |
| NOV91_RS17525 () | 3614525..3614992 | + | 468 | WP_017442178.1 | hypothetical protein | - |
| NOV91_RS17530 () | 3615310..3615588 | + | 279 | WP_077907264.1 | hypothetical protein | - |
| NOV91_RS17535 () | 3615655..3615969 | - | 315 | WP_072103451.1 | SymE family type I addiction module toxin | - |
| NOV91_RS17540 () | 3616022..3616180 | + | 159 | Protein_3414 | transposase | - |
| NOV91_RS17545 () | 3616248..3616805 | - | 558 | Protein_3415 | IS21 family transposase ISEc62 | Transposase |
| NOV91_RS17550 () | 3617843..3618553 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| NOV91_RS17555 () | 3618661..3619179 | + | 519 | WP_001056553.1 | CFA/I fimbrial subunit B | VF |
| NOV91_RS17560 () | 3619288..3621975 | + | 2688 | WP_197901833.1 | hypothetical protein | VF |
| NOV91_RS17565 () | 3622010..3623056 | + | 1047 | WP_086013164.1 | CfaE/CblD family pilus tip adhesin | - |
| NOV91_RS17570 () | 3623189..3623644 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| NOV91_RS17575 () | 3623784..3624401 | + | 618 | WP_017442092.1 | protein TioA | - |
| NOV91_RS17580 () | 3625004..3625137 | - | 134 | Protein_3422 | transposase | - |
| NOV91_RS17585 () | 3625173..3625361 | + | 189 | Protein_3423 | hypothetical protein | - |
| NOV91_RS17590 () | 3625365..3626084 | - | 720 | WP_000787605.1 | Outer membrane protein PagN | VF |
| NOV91_RS17595 () | 3626415..3626822 | - | 408 | WP_001642720.1 | Spy/CpxP family protein refolding chaperone | - |
| NOV91_RS17600 () | 3627132..3627899 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| NOV91_RS17605 () | 3628008..3630452 | - | 2445 | WP_000973043.1 | acyl-CoA dehydrogenase FadE | - |
| NOV91_RS17610 () | 3630692..3631270 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|