MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP101390 Location: 3773892..3787865 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Accession: NZ_CP101390 Location: 3773892..3787865 Organism: Salmonella enterica strain SC2017297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NMU39_RS18710 () | 3769463..3771907 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NMU39_RS18715 () | 3772016..3772783 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NMU39_RS18720 () | 3773154..3773561 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NMU39_RS18725 () | 3773892..3774611 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| NMU39_RS18730 () | 3774615..3774830 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NMU39_RS18735 () | 3774947..3775894 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NMU39_RS18740 () | 3776386..3776626 | - | 241 | Protein_3667 | PerC family transcriptional regulator | - |
| NMU39_RS18745 () | 3776709..3777530 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NMU39_RS18750 () | 3777936..3778406 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NMU39_RS18755 () | 3778428..3780938 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| NMU39_RS18760 () | 3780962..3781699 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| NMU39_RS18765 () | 3781783..3782295 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| NMU39_RS18770 () | 3783045..3783749 | - | 705 | Protein_3673 | integrase core domain-containing protein | - |
| NMU39_RS18775 () | 3783802..3784050 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NMU39_RS18780 () | 3784152..3784460 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| NMU39_RS18785 () | 3784543..3784659 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3784744..3785166 | - | 423 | - | - | Antitoxin Detail |
| NMU39_RS18790 () | 3784901..3785176 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| NMU39_RS18795 () | 3785229..3785666 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NMU39_RS18800 () | 3786229..3786675 | - | 447 | WP_000935097.1 | protein SciX | - |
| NMU39_RS18805 () | 3786669..3787538 | - | 870 | Protein_3680 | hypothetical protein | VF |
| NMU39_RS18810 () | 3787602..3787865 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NMU39_RS18815 () | 3787859..3791953 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NMU39_RS18820 () | 3791972..3792418 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |