MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP100739 Location: 3626583..3640556 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: chromosome
Accession: NZ_CP100739 Location: 3626583..3640556 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL736_RS17790 () | 3622154..3624598 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NL736_RS17795 () | 3624707..3625474 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NL736_RS17800 () | 3625845..3626252 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NL736_RS17805 () | 3626583..3627302 | + | 720 | WP_022630913.1 | hypothetical protein | VF |
| NL736_RS17810 () | 3627306..3627521 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NL736_RS17815 () | 3627638..3628585 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NL736_RS17820 () | 3629077..3629317 | - | 241 | Protein_3482 | PerC family transcriptional regulator | - |
| NL736_RS17825 () | 3629400..3630221 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NL736_RS17830 () | 3630627..3631097 | - | 471 | WP_024159565.1 | AfaD family invasin | - |
| NL736_RS17835 () | 3631119..3633629 | - | 2511 | WP_000669634.1 | hypothetical protein | VF |
| NL736_RS17840 () | 3633653..3634390 | - | 738 | WP_001535430.1 | hypothetical protein | VF |
| NL736_RS17845 () | 3634474..3634986 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| NL736_RS17850 () | 3635736..3636440 | - | 705 | Protein_3488 | integrase core domain-containing protein | - |
| NL736_RS17855 () | 3636493..3636741 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NL736_RS17860 () | 3636843..3637151 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| NL736_RS17865 () | 3637234..3637350 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3637435..3637857 | - | 423 | - | - | Antitoxin Detail |
| NL736_RS17870 () | 3637592..3637867 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| NL736_RS17875 () | 3637920..3638357 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NL736_RS17880 () | 3638920..3639366 | - | 447 | WP_000935097.1 | protein SciX | - |
| NL736_RS17885 () | 3639360..3640229 | - | 870 | Protein_3495 | hypothetical protein | VF |
| NL736_RS17890 () | 3640293..3640556 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NL736_RS17895 () | 3640550..3644644 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NL736_RS17900 () | 3644663..3645109 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |