MGE detailed information
MGE type: Prophage MGE length: 10744 bp
Accession: NZ_CP100732 Location: 311528..322271 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 Replicon: chromosome
Accession: NZ_CP100732 Location: 311528..322271 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.1932 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL737_RS01395 (306948) | 306948..308003 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| NL737_RS01400 (308249) | 308249..309103 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| NL737_RS01405 (309425) | 309425..310528 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| NL737_RS01410 (310611) | 310611..310745 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| NL737_RS01415 (310723) | 310723..311106 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| NL737_RS01420 (311528) | 311528..312637 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| NL737_RS01425 (312697) | 312697..313623 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| NL737_RS01430 (313620) | 313620..314897 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| NL737_RS01435 (314894) | 314894..315661 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NL737_RS01440 (315663) | 315663..316376 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| NL737_RS01445 (316508) | 316508..316729 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NL737_RS01450 (316726) | 316726..317094 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NL737_RS01455 (317353) | 317353..318669 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| NL737_RS01460 (318733) | 318733..319620 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| NL737_RS01465 (319617) | 319617..320462 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| NL737_RS01470 (320464) | 320464..321534 | + | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NL737_RS01475 (321531) | 321531..322271 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| NL737_RS01480 (322284) | 322284..322700 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| NL737_RS01485 (322826) | 322826..324568 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| NL737_RS01490 (324613) | 324613..325647 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| NL737_RS01495 (325644) | 325644..326615 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.006 |