MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_CP100715 Location: 995816..995992 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Accession: NZ_CP100715 Location: 995816..995992 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL730_RS04735 (990929) | 990929..991309 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| NL730_RS04740 (991365) | 991365..993932 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NL730_RS04745 (994091) | 994091..994612 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| NL730_RS04750 (994784) | 994784..995440 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| NL730_RS04755 (995787) | 995787..995992 | + | 206 | Protein_932 | IS5 family transposase ISEcl3 | Transposase |
| NL730_RS04760 (996065) | 996065..996592 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NL730_RS04765 (996589) | 996589..996879 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NL730_RS04770 (997149) | 997149..997327 | - | 179 | Protein_935 | IS3 family transposase | - |
| NL730_RS04775 (997568) | 997568..997894 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| NL730_RS04780 (998167) | 998167..998514 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NL730_RS04785 (998499) | 998499..998948 | - | 450 | WP_000381610.1 | membrane protein | - |
| NL730_RS04790 (999379) | 999379..999822 | - | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| NL730_RS04795 (1000279) | 1000279..1000929 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |