MGE detailed information
MGE type: Genomic_island MGE length: 12988 bp
Accession: NZ_CP100715 Location: 3672502..3685489 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Accession: NZ_CP100715 Location: 3672502..3685489 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R17.5474 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL730_RS18170 () | 3668302..3669069 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NL730_RS18175 () | 3669440..3669847 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NL730_RS18180 () | 3670178..3670897 | + | 720 | WP_022630913.1 | adhesin/invasin protein PagN | - |
| NL730_RS18185 () | 3670901..3671116 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NL730_RS18190 () | 3671233..3672180 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NL730_RS18195 () | 3672672..3672912 | - | 241 | Protein_3559 | PerC family transcriptional regulator | - |
| NL730_RS18200 () | 3672995..3673816 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NL730_RS18205 () | 3674222..3674692 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NL730_RS18210 () | 3674714..3677224 | - | 2511 | WP_000669634.1 | hypothetical protein | VF |
| NL730_RS18215 () | 3677248..3677985 | - | 738 | WP_001535430.1 | hypothetical protein | VF |
| NL730_RS18220 () | 3678069..3678581 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| NL730_RS18225 () | 3679300..3680508 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| NL730_RS18230 () | 3680669..3681373 | - | 705 | Protein_3566 | integrase core domain-containing protein | - |
| NL730_RS18235 () | 3681426..3681674 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NL730_RS18240 () | 3681776..3682084 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| NL730_RS18245 () | 3682167..3682283 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3682368..3682790 | - | 423 | - | - | Antitoxin Detail |
| NL730_RS18250 () | 3682525..3682800 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| NL730_RS18255 () | 3682853..3683290 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NL730_RS18260 () | 3683853..3684299 | - | 447 | WP_000935097.1 | protein SciX | - |
| NL730_RS18265 () | 3684293..3685162 | - | 870 | Protein_3573 | hypothetical protein | VF |
| NL730_RS18270 () | 3685226..3685489 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NL730_RS18275 () | 3685483..3689577 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NL730_RS18280 () | 3689596..3690042 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.009 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.009 |