MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP100707 Location: 3678734..3692707 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: chromosome
Accession: NZ_CP100707 Location: 3678734..3692707 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain R18.0409 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL735_RS18220 () | 3674305..3676749 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NL735_RS18225 () | 3676858..3677625 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NL735_RS18230 () | 3677996..3678403 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NL735_RS18235 () | 3678734..3679453 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| NL735_RS18240 () | 3679457..3679672 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NL735_RS18245 () | 3679789..3680736 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NL735_RS18250 () | 3681228..3681468 | - | 241 | Protein_3570 | PerC family transcriptional regulator | - |
| NL735_RS18255 () | 3681551..3682372 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NL735_RS18260 () | 3682778..3683248 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NL735_RS18265 () | 3683270..3685780 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| NL735_RS18270 () | 3685804..3686541 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| NL735_RS18275 () | 3686625..3687137 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| NL735_RS18280 () | 3687887..3688591 | - | 705 | Protein_3576 | integrase core domain-containing protein | - |
| NL735_RS18285 () | 3688644..3688892 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NL735_RS18290 () | 3688994..3689302 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| NL735_RS18295 () | 3689385..3689501 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3689586..3690008 | - | 423 | - | - | Antitoxin Detail |
| NL735_RS18300 () | 3689743..3690018 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| NL735_RS18305 () | 3690071..3690508 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NL735_RS18310 () | 3691071..3691517 | - | 447 | WP_000935097.1 | protein SciX | - |
| NL735_RS18315 () | 3691511..3692380 | - | 870 | Protein_3583 | hypothetical protein | VF |
| NL735_RS18320 () | 3692444..3692707 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NL735_RS18325 () | 3692701..3696795 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NL735_RS18330 () | 3696814..3697260 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |