MGE detailed information
MGE type: Genomic_island MGE length: 43618 bp
Accession: NZ_CP100670 Location: 941329..984946 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain R17.0904 Replicon: chromosome
Accession: NZ_CP100670 Location: 941329..984946 Organism: Salmonella enterica subsp. enterica serovar Mbandaka strain R17.0904 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL713_RS04350 () | 937227..937517 | + | 291 | WP_000175471.1 | hypothetical protein | - |
| NL713_RS04355 () | 937579..938121 | + | 543 | WP_000996815.1 | type VI secretion system contractile sheath small subunit | - |
| NL713_RS04360 () | 938145..939653 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| NL713_RS04365 () | 939716..939826 | + | 111 | WP_077907261.1 | BPSL0067 family protein | - |
| NL713_RS04370 () | 939953..940285 | + | 333 | WP_077905251.1 | hypothetical protein | - |
| NL713_RS04375 () | 940539..941024 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| NL713_RS04380 () | 941092..941286 | + | 195 | Protein_847 | type VI secretion system lipoprotein TssJ | - |
| NL713_RS04385 () | 941329..941814 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| NL713_RS04390 () | 941799..942182 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| NL713_RS04395 () | 942325..942810 | + | 486 | WP_000119443.1 | Protein hcp1 | VF |
| NL713_RS04400 () | 942877..943413 | + | 537 | WP_001007104.1 | hypothetical protein | VF |
| NL713_RS04405 () | 943417..944760 | + | 1344 | WP_017442155.1 | hypothetical protein | VF |
| NL713_RS04410 () | 944757..946061 | + | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| NL713_RS04415 () | 946066..946839 | + | 774 | WP_017442156.1 | Rap1a/Tai family immunity protein | - |
| NL713_RS04420 () | 947041..947472 | + | 432 | WP_077907262.1 | Shiga toxin A subunit | - |
| NL713_RS04425 () | 947506..951375 | + | 3870 | WP_017442158.1 | hypothetical protein | VF |
| NL713_RS04430 () | 951375..952142 | + | 768 | WP_001254130.1 | TagF domain-containing protein | - |
| NL713_RS04435 () | 952185..952655 | + | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| NL713_RS04440 () | 952640..953101 | + | 462 | WP_023218482.1 | hypothetical protein | - |
| NL713_RS04445 () | 953137..953232 | + | 96 | Protein_860 | cytoplasmic protein | - |
| NL713_RS04450 () | 953229..953645 | + | 417 | WP_000759645.1 | DUF2195 family protein | - |
| NL713_RS04455 () | 953669..954190 | + | 522 | WP_077907259.1 | DUF2778 domain-containing protein | - |
| NL713_RS04460 () | 954586..956820 | + | 2235 | WP_254520499.1 | hypothetical protein | VF |
| NL713_RS04465 () | 956880..957338 | + | 459 | WP_000186513.1 | DcrB-related protein | - |
| NL713_RS04470 () | 957354..962039 | + | 4686 | WP_017442161.1 | hypothetical protein | VF |
| NL713_RS04475 () | 962044..962322 | + | 279 | WP_017442162.1 | hypothetical protein | - |
| NL713_RS04480 () | 962369..962575 | - | 207 | WP_026080916.1 | SymE family type I addiction module toxin | Toxin Detail |
| NL713_RS04485 () | 962569..963822 | + | 1254 | Protein_868 | Putative deoxyribonuclease RhsC | VF |
| NL713_RS04490 () | 963825..964112 | + | 288 | WP_017442165.1 | hypothetical protein | - |
| NL713_RS04495 () | 964181..964315 | - | 135 | Protein_870 | type I toxin-antitoxin system SymE family toxin | - |
| NL713_RS04500 () | 964741..965709 | + | 969 | Protein_871 | hypothetical protein | VF |
| NL713_RS04505 () | 965703..966149 | + | 447 | WP_000935097.1 | protein SciX | - |
| NL713_RS04510 () | 966668..967150 | + | 483 | WP_017442170.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NL713_RS04515 () | 967203..967430 | - | 228 | WP_017442171.1 | SymE family type I addiction module toxin | Toxin Detail |
| NL713_RS04520 () | 967613..967729 | + | 117 | Protein_875 | RHS repeat-associated core domain-containing protein | - |
| NL713_RS04525 () | 967844..968125 | + | 282 | WP_176132412.1 | hypothetical protein | - |
| NL713_RS04530 () | 968122..968568 | + | 447 | WP_017442172.1 | hypothetical protein | - |
| NL713_RS04535 () | 968927..969079 | + | 153 | WP_223195354.1 | hypothetical protein | - |
| NL713_RS04540 () | 969100..969378 | + | 279 | WP_197398372.1 | hypothetical protein | - |
| NL713_RS04545 () | 969380..969958 | + | 579 | WP_017442174.1 | hypothetical protein | - |
| NL713_RS04550 () | 970163..970540 | + | 378 | WP_223195355.1 | HNH endonuclease | - |
| NL713_RS04555 () | 970537..970893 | + | 357 | WP_017442175.1 | hypothetical protein | - |
| NL713_RS04560 () | 970960..971205 | - | 246 | WP_017442176.1 | hypothetical protein | Toxin Detail |
| - | 971055..971362 | + | 308 | - | - | Antitoxin Detail |
| NL713_RS04565 () | 971539..971832 | + | 294 | WP_129369132.1 | hypothetical protein | - |
| NL713_RS04570 () | 972282..972653 | + | 372 | WP_223195353.1 | hypothetical protein | - |
| NL713_RS04575 () | 972650..973117 | + | 468 | WP_017442178.1 | hypothetical protein | - |
| NL713_RS04580 () | 973435..973713 | + | 279 | WP_077907264.1 | hypothetical protein | - |
| NL713_RS04585 () | 973780..974094 | - | 315 | WP_072103451.1 | SymE family type I addiction module toxin | - |
| NL713_RS04590 () | 974147..974305 | + | 159 | Protein_889 | transposase | - |
| NL713_RS04595 () | 974373..974930 | - | 558 | Protein_890 | IS21 family transposase ISEc62 | Transposase |
| NL713_RS04600 () | 975967..976677 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| NL713_RS04605 () | 976785..977303 | + | 519 | WP_001056553.1 | CFA/I fimbrial subunit B | VF |
| NL713_RS04610 () | 977412..980099 | + | 2688 | WP_017442183.1 | hypothetical protein | VF |
| NL713_RS04615 () | 980134..981180 | + | 1047 | WP_086013164.1 | CfaE/CblD family pilus tip adhesin | - |
| NL713_RS04620 () | 981313..981768 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| NL713_RS04625 () | 981908..982525 | + | 618 | WP_017442092.1 | protein TioA | - |
| NL713_RS04630 () | 983128..983261 | - | 134 | Protein_897 | transposase | - |
| NL713_RS04635 () | 983297..983485 | + | 189 | Protein_898 | hypothetical protein | - |
| NL713_RS04640 () | 983489..984208 | - | 720 | WP_000787605.1 | Outer membrane protein PagN | VF |
| NL713_RS04645 () | 984539..984946 | - | 408 | WP_001642720.1 | Spy/CpxP family protein refolding chaperone | - |
| NL713_RS04650 () | 985256..986023 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| NL713_RS04655 () | 986132..988576 | - | 2445 | WP_000973043.1 | acyl-CoA dehydrogenase FadE | - |
| NL713_RS04660 () | 988816..989394 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|