MGE detailed information
MGE type: Conjugative plasmid MGE length: 139970 bp
Accession: NZ_CP100501 Location: 1..139970 Organism: Escherichia coli strain LH50-c Replicon: plasmid pLH50-c-A
Accession: NZ_CP100501 Location: 1..139970 Organism: Escherichia coli strain LH50-c Replicon: plasmid pLH50-c-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLZ13_RS27025 (NLZ13_27030) | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| NLZ13_RS27030 (NLZ13_27035) | 1565..1755 | + | 191 | Protein_1 | hypothetical protein | - |
| NLZ13_RS27035 (NLZ13_27040) | 1828..2079 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NLZ13_RS27040 (NLZ13_27045) | 2076..2363 | + | 288 | WP_000222760.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NLZ13_RS27045 (NLZ13_27050) | 2467..3057 | + | 591 | WP_103556655.1 | hypothetical protein | VF |
| NLZ13_RS27050 (NLZ13_27055) | 3160..3825 | + | 666 | WP_000536047.1 | ProQ/FINO family protein | - |
| NLZ13_RS27055 (NLZ13_27060) | 3883..4197 | + | 315 | WP_000633742.1 | hypothetical protein | - |
| NLZ13_RS27060 (NLZ13_27065) | 4850..5347 | - | 498 | WP_032297276.1 | hypothetical protein | VF |
| NLZ13_RS27065 (NLZ13_27070) | 5321..6309 | - | 989 | Protein_8 | hypothetical protein | VF |
| NLZ13_RS27075 (NLZ13_27080) | 8076..9086 | + | 1011 | WP_072740751.1 | substrate-binding domain-containing protein | - |
| NLZ13_RS27080 (NLZ13_27085) | 9180..11306 | + | 2127 | WP_000433621.1 | alpha-galactosidase | - |
| NLZ13_RS27085 (NLZ13_27090) | 11361..12638 | + | 1278 | WP_001099190.1 | MFS transporter | - |
| NLZ13_RS27090 (NLZ13_27095) | 12635..14065 | + | 1431 | WP_084818456.1 | glycoside hydrolase family 32 protein | - |
| NLZ13_RS27095 (NLZ13_27100) | 14129..14644 | + | 516 | WP_112038148.1 | PTS glucose transporter subunit IIA | - |
| NLZ13_RS27100 (NLZ13_27105) | 14650..14853 | + | 204 | WP_072740748.1 | DUF2913 family protein | - |
| NLZ13_RS27105 (NLZ13_27110) | 14915..15226 | + | 312 | WP_001313183.1 | DUF2913 family protein | - |
| NLZ13_RS27110 (NLZ13_27115) | 15256..16182 | + | 927 | WP_000108760.1 | aminoimidazole riboside kinase | - |
| NLZ13_RS27115 (NLZ13_27120) | 16282..17778 | + | 1497 | WP_000716410.1 | carbohydrate porin | - |
| NLZ13_RS27120 (NLZ13_27125) | 18015..18806 | - | 792 | Protein_19 | IS256 family transposase IS1414 | Transposase |
| NLZ13_RS27125 (NLZ13_27130) | 18862..20074 | + | 1213 | Protein_20 | IS3 family transposase IS629 | Transposase |
| NLZ13_RS27130 (NLZ13_27135) | 20119..20550 | + | 432 | Protein_21 | relaxase NikB | - |
| NLZ13_RS27135 (NLZ13_27140) | 20655..20739 | + | 85 | Protein_22 | hypothetical protein | - |
| NLZ13_RS27140 (NLZ13_27145) | 21009..21677 | + | 669 | WP_000155780.1 | cysteine hydrolase | - |
| NLZ13_RS27145 (NLZ13_27150) | 21683..22543 | + | 861 | WP_001442105.1 | DUF2877 domain-containing protein | - |
| NLZ13_RS27150 (NLZ13_27155) | 22638..24197 | + | 1560 | WP_000865634.1 | acyl-CoA synthetase FdrA | - |
| NLZ13_RS27155 (NLZ13_27160) | 24194..25618 | + | 1425 | WP_053287902.1 | DUF1116 domain-containing protein | - |
| NLZ13_RS27160 (NLZ13_27165) | 25611..26567 | + | 957 | WP_062894335.1 | carbamate kinase | - |
| NLZ13_RS27165 (NLZ13_27170) | 26584..26973 | + | 390 | WP_254539435.1 | glutamyl-tRNA amidotransferase | - |
| NLZ13_RS27170 (NLZ13_27175) | 26999..28222 | + | 1224 | WP_254539436.1 | cytosine permease | - |
| NLZ13_RS27175 (NLZ13_27180) | 28300..28992 | + | 693 | WP_254539437.1 | putative HTH-type transcriptional regulator YahB | VF |
| NLZ13_RS27180 (NLZ13_27185) | 28977..29189 | + | 213 | WP_249941578.1 | hypothetical protein | - |
| NLZ13_RS27185 (NLZ13_27190) | 29623..30012 | + | 390 | WP_062894334.1 | cytochrome b562 | - |
| NLZ13_RS27190 (NLZ13_27195) | 30373..30753 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS27195 (NLZ13_27200) | 30750..31097 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS27200 (NLZ13_27205) | 31147..32685 | + | 1539 | WP_000997962.1 | IS66 family transposase ISEc8 | Transposase |
| NLZ13_RS27205 (NLZ13_27210) | 32711..33942 | + | 1232 | WP_254539439.1 | IS3 family transposase IS2 | Transposase |
| NLZ13_RS27210 (NLZ13_27215) | 34207..37704 | + | 3498 | WP_001038844.1 | hypothetical protein | VF |
| NLZ13_RS27215 (NLZ13_27220) | 37851..39044 | + | 1194 | Protein_38 | IS3 family transposase IS629 | Transposase |
| NLZ13_RS27220 (NLZ13_27225) | 39137..40324 | - | 1188 | WP_160348040.1 | MFS transporter | - |
| NLZ13_RS27225 (NLZ13_27230) | 40381..41062 | - | 682 | Protein_40 | Petrobactin import ATP-binding protein FpuD | VF |
| NLZ13_RS27230 (NLZ13_27235) | 41062..42099 | - | 1038 | WP_000110580.1 | Hemin transport system permease protein HmuU | VF |
| NLZ13_RS27235 (NLZ13_27240) | 42099..43097 | - | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| NLZ13_RS27240 (NLZ13_27245) | 43247..43405 | - | 159 | Protein_43 | integrase core domain-containing protein | - |
| NLZ13_RS27245 (NLZ13_27250) | 43452..44042 | - | 591 | WP_000086535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| NLZ13_RS27250 (NLZ13_27255) | 44543..44827 | + | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NLZ13_RS27255 (NLZ13_27260) | 44827..45102 | + | 276 | WP_000421266.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NLZ13_RS27260 (NLZ13_27265) | 45208..45447 | + | 240 | WP_001105068.1 | hypothetical protein | - |
| NLZ13_RS27265 (NLZ13_27270) | 45610..46782 | - | 1173 | WP_062893848.1 | IS91 family transposase ISSbo1 | Transposase |
| NLZ13_RS27270 (NLZ13_27275) | 47140..49234 | + | 2095 | Protein_49 | AAA family ATPase | - |
| NLZ13_RS27275 (NLZ13_27280) | 49396..49812 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NLZ13_RS27280 (NLZ13_27285) | 49809..50039 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NLZ13_RS27285 (NLZ13_27290) | 50599..51012 | + | 414 | WP_062893835.1 | hypothetical protein | - |
| NLZ13_RS27290 (NLZ13_27295) | 51014..51799 | + | 786 | WP_062893836.1 | site-specific integrase | - |
| NLZ13_RS27295 (NLZ13_27300) | 52401..53033 | + | 633 | WP_000312331.1 | ParA family protein | - |
| NLZ13_RS27300 (NLZ13_27305) | 53033..53407 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| NLZ13_RS27305 (NLZ13_27310) | 53646..54620 | + | 975 | WP_001217833.1 | plasmid segregation protein ParM | - |
| NLZ13_RS27310 (NLZ13_27315) | 54624..55016 | + | 393 | WP_112038214.1 | plasmid partitioning/stability family protein | - |
| NLZ13_RS27315 (NLZ13_27320) | 55697..56599 | + | 903 | WP_077879506.1 | DUF1281 domain-containing protein | - |
| NLZ13_RS27320 (NLZ13_27325) | 56596..56907 | + | 312 | WP_074435400.1 | hypothetical protein | - |
| NLZ13_RS27325 (NLZ13_27330) | 56982..57665 | + | 684 | WP_062893839.1 | DNA methylase | - |
| NLZ13_RS27330 (NLZ13_27335) | 57666..57887 | + | 222 | WP_062893840.1 | hypothetical protein | - |
| NLZ13_RS27335 (NLZ13_27340) | 57901..58335 | + | 435 | WP_062893841.1 | DUF1380 family protein | - |
| NLZ13_RS27340 (NLZ13_27345) | 58380..59150 | + | 771 | WP_112038238.1 | hypothetical protein | - |
| NLZ13_RS27345 (NLZ13_27350) | 59565..59990 | + | 426 | WP_062893843.1 | antirestriction protein | - |
| NLZ13_RS27350 (NLZ13_27355) | 60037..60456 | + | 420 | WP_000271764.1 | DUF1380 family protein | - |
| NLZ13_RS27355 (NLZ13_27360) | 60456..60647 | + | 192 | WP_001027514.1 | hypothetical protein | - |
| NLZ13_RS27360 (NLZ13_27365) | 60662..60964 | + | 303 | WP_097498621.1 | hypothetical protein | - |
| NLZ13_RS27365 (NLZ13_27370) | 61401..61922 | + | 522 | WP_062893845.1 | single-stranded DNA-binding protein | - |
| NLZ13_RS27370 (NLZ13_27375) | 61978..62211 | + | 234 | WP_062893846.1 | DUF905 domain-containing protein | - |
| NLZ13_RS27375 (NLZ13_27380) | 62275..64233 | + | 1959 | WP_254539438.1 | ParB/RepB/Spo0J family partition protein | - |
| NLZ13_RS27380 (NLZ13_27385) | 64288..64722 | + | 435 | WP_044789605.1 | conjugation system SOS inhibitor PsiB | - |
| NLZ13_RS27385 (NLZ13_27390) | 64719..65438 | + | 720 | WP_062893863.1 | plasmid SOS inhibition protein A | - |
| NLZ13_RS27390 (NLZ13_27395) | 65435..66031 | + | 597 | WP_029391986.1 | hypothetical protein | - |
| NLZ13_RS27395 (NLZ13_27400) | 66496..66996 | + | 501 | WP_000117633.1 | antirestriction protein ArdA | - |
| NLZ13_RS27400 (NLZ13_27405) | 66998..67606 | - | 609 | WP_170852529.1 | hypothetical protein | - |
| NLZ13_RS27405 (NLZ13_27410) | 67725..68159 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| NLZ13_RS27410 (NLZ13_27415) | 68251..68517 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| NLZ13_RS27415 (NLZ13_27420) | 68582..69460 | + | 879 | WP_001297818.1 | ISNCY family transposase ISRor2 | VF |
| NLZ13_RS27420 (NLZ13_27425) | 69522..69728 | + | 207 | WP_112038153.1 | hypothetical protein | VF |
| NLZ13_RS27425 (NLZ13_27430) | 69759..70010 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| NLZ13_RS27430 (NLZ13_27435) | 70590..71438 | + | 849 | WP_112038154.1 | DUF4942 domain-containing protein | - |
| NLZ13_RS27435 (NLZ13_27440) | 71524..71859 | - | 336 | WP_112038155.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| NLZ13_RS27440 (NLZ13_27445) | 72092..72424 | + | 333 | WP_001291056.1 | plasmid mobilization protein MobA | - |
| NLZ13_RS27445 (NLZ13_27450) | 72436..75138 | + | 2703 | WP_033810803.1 | hypothetical protein | Relaxase |
| NLZ13_RS27450 (NLZ13_27455) | 75207..75455 | + | 249 | WP_033810804.1 | cell growth regulatory protein MazE | - |
| NLZ13_RS27455 (NLZ13_27460) | 75455..75799 | + | 345 | WP_032354044.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| NLZ13_RS27460 (NLZ13_27465) | 75835..76056 | - | 222 | Protein_87 | IS256 family transposase IS1414 | Transposase |
| NLZ13_RS27465 (NLZ13_27470) | 76110..77303 | + | 1194 | Protein_88 | IS3 family transposase IS629 | Transposase |
| NLZ13_RS27470 (NLZ13_27475) | 77346..77804 | - | 459 | Protein_89 | IS256 family transposase IS1414 | Transposase |
| NLZ13_RS27475 (NLZ13_27480) | 77891..78136 | - | 246 | WP_045148228.1 | hypothetical protein | - |
| NLZ13_RS27490 (NLZ13_27495) | 82493..82675 | + | 183 | Protein_93 | IS256 family transposase | - |
| NLZ13_RS27495 (NLZ13_27500) | 83107..85236 | - | 2130 | Protein_94 | TraM recognition domain-containing protein | - |
| NLZ13_RS27500 (NLZ13_27505) | 85217..86335 | - | 1119 | WP_029391999.1 | DsbC family protein | - |
| NLZ13_RS27505 (NLZ13_27510) | 86332..87666 | - | 1335 | WP_181664678.1 | IncI1-type conjugal transfer protein TrbA | - |
| NLZ13_RS27510 (NLZ13_27515) | 88123..88299 | - | 177 | WP_181664677.1 | hypothetical protein | - |
| NLZ13_RS27515 (NLZ13_27520) | 88449..88916 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| NLZ13_RS27520 (NLZ13_27525) | 89076..89699 | + | 624 | WP_062893917.1 | hypothetical protein | - |
| NLZ13_RS27525 (NLZ13_27530) | 89897..90112 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| NLZ13_RS27530 (NLZ13_27535) | 90116..90484 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| NLZ13_RS27535 (NLZ13_27540) | 90496..90687 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| NLZ13_RS27540 (NLZ13_27545) | 91090..91242 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| NLZ13_RS27545 (NLZ13_27550) | 91869..92516 | - | 648 | WP_032182045.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| NLZ13_RS27550 (NLZ13_27555) | 92604..94763 | - | 2160 | WP_112038151.1 | DotA/TraY family protein | - |
| NLZ13_RS27555 (NLZ13_27560) | 94838..95407 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| NLZ13_RS27560 (NLZ13_27565) | 95404..96609 | - | 1206 | WP_065203154.1 | conjugal transfer protein TraW | - |
| NLZ13_RS27565 (NLZ13_27570) | 96567..97187 | - | 621 | WP_062893834.1 | hypothetical protein | - |
| NLZ13_RS27570 (NLZ13_27575) | 97187..100231 | - | 3045 | WP_112038150.1 | ATP-binding protein | - |
| NLZ13_RS27575 (NLZ13_27580) | 100567..100944 | - | 378 | Protein_110 | Tn3 family transposase | - |
| NLZ13_RS27580 (NLZ13_27585) | 101029..101136 | + | 108 | Protein_111 | IS21 family transposase ISYru1 | Transposase |
| NLZ13_RS27585 (NLZ13_27590) | 101135..102940 | - | 1806 | Protein_112 | Tn3 family transposase ISPsy42 | Transposase |
| NLZ13_RS27590 (NLZ13_27595) | 103089..103664 | + | 576 | WP_081521067.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| NLZ13_RS27595 (NLZ13_27600) | 103924..104787 | - | 864 | WP_081521068.1 | endonuclease/exonuclease/phosphatase family protein | - |
| NLZ13_RS27600 (NLZ13_27605) | 104800..105123 | - | 324 | Protein_115 | IS3 family transposase IS2 | Transposase |
| NLZ13_RS27605 (NLZ13_27610) | 105112..105608 | - | 497 | Protein_116 | IS1 family transposase | - |
| NLZ13_RS27610 (NLZ13_27615) | 105956..106345 | - | 390 | WP_081520987.1 | hypothetical protein | - |
| NLZ13_RS27615 (NLZ13_27620) | 106402..107220 | - | 819 | WP_072195912.1 | conjugal transfer protein TraT | - |
| NLZ13_RS27620 (NLZ13_27625) | 107234..107386 | - | 153 | Protein_119 | TraS | - |
| NLZ13_RS27625 (NLZ13_27630) | 107443..107841 | - | 399 | WP_021532718.1 | hypothetical protein | - |
| NLZ13_RS27630 (NLZ13_27635) | 107888..108418 | - | 531 | WP_000987022.1 | conjugal transfer protein TraQ | - |
| NLZ13_RS27635 (NLZ13_27640) | 108415..109128 | - | 714 | WP_065203151.1 | conjugal transfer protein TraP | - |
| NLZ13_RS27640 (NLZ13_27645) | 109125..110456 | - | 1332 | WP_112038044.1 | conjugal transfer protein TraO | - |
| NLZ13_RS27645 (NLZ13_27650) | 110460..111434 | - | 975 | WP_106879216.1 | hypothetical protein | VF |
| NLZ13_RS27650 (NLZ13_27655) | 111445..112140 | - | 696 | WP_072657234.1 | DotI/IcmL family type IV secretion protein | - |
| NLZ13_RS27655 (NLZ13_27660) | 112152..112502 | - | 351 | WP_021532713.1 | hypothetical protein | - |
| NLZ13_RS27660 (NLZ13_27665) | 112519..116550 | - | 4032 | WP_112038045.1 | DUF5710 domain-containing protein | - |
| NLZ13_RS27665 (NLZ13_27670) | 116614..116904 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| NLZ13_RS27670 (NLZ13_27675) | 116901..118049 | - | 1149 | WP_000625247.1 | putative protein YggR | VF |
| NLZ13_RS27675 (NLZ13_27680) | 118033..118869 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| NLZ13_RS27680 (NLZ13_27685) | 118866..119318 | - | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| NLZ13_RS27685 (NLZ13_27690) | 119367..119537 | - | 171 | WP_001597011.1 | hypothetical protein | - |
| NLZ13_RS27690 (NLZ13_27695) | 119677..120879 | - | 1203 | WP_112038046.1 | conjugal transfer protein TraF | - |
| NLZ13_RS27695 (NLZ13_27700) | 120969..121790 | - | 822 | WP_000804089.1 | hypothetical protein | - |
| NLZ13_RS27700 (NLZ13_27705) | 122050..122370 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| NLZ13_RS27705 (NLZ13_27710) | 122462..122752 | - | 291 | WP_065898789.1 | hypothetical protein | - |
| NLZ13_RS27710 (NLZ13_27715) | 122794..123963 | - | 1170 | WP_065203201.1 | site-specific integrase | - |
| NLZ13_RS27715 (NLZ13_27720) | 124248..125495 | - | 1248 | WP_254539434.1 | hypothetical protein | VF |
| NLZ13_RS27720 (NLZ13_27725) | 125492..126199 | - | 708 | WP_153789788.1 | A24 family peptidase | - |
| NLZ13_RS27725 (NLZ13_27730) | 126159..126635 | - | 477 | WP_029391914.1 | hypothetical protein | VF |
| NLZ13_RS27730 (NLZ13_27735) | 126694..127230 | - | 537 | WP_021532703.1 | type 4 pilus major pilin | - |
| NLZ13_RS27735 (NLZ13_27740) | 127280..128380 | - | 1101 | WP_087526023.1 | hypothetical protein | VF |
| NLZ13_RS27740 (NLZ13_27745) | 128382..129890 | - | 1509 | WP_100692536.1 | hypothetical protein | VF |
| NLZ13_RS27745 (NLZ13_27750) | 129987..130583 | - | 597 | WP_029391917.1 | hypothetical protein | - |
| NLZ13_RS27750 (NLZ13_27755) | 130679..131233 | - | 555 | WP_062894345.1 | hypothetical protein | - |
| NLZ13_RS27755 (NLZ13_27760) | 131282..131734 | - | 453 | WP_021547657.1 | hypothetical protein | VF |
| NLZ13_RS27760 (NLZ13_27765) | 131724..133019 | - | 1296 | WP_112038144.1 | type 4b pilus protein PilO2 | - |
| NLZ13_RS27765 (NLZ13_27770) | 133040..134659 | - | 1620 | WP_112038145.1 | Outer membrane lipoprotein BfpB | VF |
| NLZ13_RS27770 (NLZ13_27775) | 134690..135127 | - | 438 | WP_112038146.1 | type IV pilus biogenesis protein PilM | - |
| NLZ13_RS27775 (NLZ13_27780) | 135132..136202 | - | 1071 | WP_112038147.1 | hypothetical protein | VF |
| NLZ13_RS27780 (NLZ13_27785) | 136324..136719 | + | 396 | WP_032354078.1 | hypothetical protein | - |
| NLZ13_RS27785 (NLZ13_27790) | 137224..137466 | - | 243 | WP_059330908.1 | PilI type IV pilus biogenesis protein | - |
| NLZ13_RS27790 (NLZ13_27795) | 137821..138486 | - | 666 | WP_021547664.1 | hypothetical protein | - |
| NLZ13_RS27795 (NLZ13_27800) | 138627..139268 | - | 642 | WP_021547665.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|