NZ_CP1001151..142065

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 142065 bp
Accession: NZ_CP100115        Location: 1..142065         Organism: Klebsiella pneumoniae strain HSKP1       Replicon: plasmid pHSKP1-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NIL09_RS25860 (19) 19..894 + 876 WP_004098982.1 replication initiation protein -
NIL09_RS25865 (1551) 1551..2177 + 627 WP_004197649.1 hypothetical protein VF
NIL09_RS25870 (2174) 2174..2476 + 303 WP_004197636.1 hypothetical protein -
NIL09_RS25875 (2988) 2988..3782 - 795 WP_004197635.1 site-specific integrase -
NIL09_RS25880 (3980) 3980..4996 - 1017 WP_017899884.1 hypothetical protein -
NIL09_RS25885 (5007) 5007..5321 - 315 WP_053389906.1 hypothetical protein -
NIL09_RS25890 (5348) 5348..5743 - 396 WP_017899885.1 hypothetical protein -
NIL09_RS25895 (5912) 5912..6217 - 306 WP_013023785.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
NIL09_RS25900 (6219) 6219..6437 - 219 WP_001568025.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
NIL09_RS25905 (6607) 6607..7068 - 462 WP_160880186.1 hypothetical protein -
NIL09_RS25910 (7025) 7025..7255 + 231 WP_001261282.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
NIL09_RS25915 (7252) 7252..7668 + 417 WP_001044770.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
NIL09_RS25920 (7742) 7742..9304 + 1563 WP_004206609.1 AAA family ATPase -
NIL09_RS25925 (9289) 9289..10311 + 1023 WP_000361404.1 helicase UvrD -
NIL09_RS25930 (10567) 10567..11264 + 698 WP_223174630.1 IS1 family transposase ISKpn14 Transposase
NIL09_RS25935 (11293) 11293..11565 + 273 Protein_15 transposase -
NIL09_RS25940 (11845) 11845..12849 - 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
NIL09_RS25945 (13077) 13077..14282 + 1206 WP_000184001.1 chromate efflux transporter -
NIL09_RS25950 (14293) 14293..14598 + 306 WP_000130000.1 Transcriptional regulator Relaxase
NIL09_RS25955 (14642) 14642..14707 + 66 Protein_19 EAL domain-containing protein -
NIL09_RS25960 (14825) 14825..14965 + 141 Protein_20 IS6 family transposase -
NIL09_RS25965 (15018) 15018..15722 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
NIL09_RS25970 (17302) 17302..17536 + 235 Protein_22 type II toxin-antitoxin system RelE/ParE family toxin -
NIL09_RS25975 (17664) 17664..17945 + 282 WP_001333089.1 hypothetical protein -
NIL09_RS25980 (18068) 18068..18418 - 351 WP_000361389.1 plasmid partitioning/stability family protein -
NIL09_RS25985 (18421) 18421..19383 - 963 WP_000959884.1 plasmid segregation protein ParM -
NIL09_RS25990 (19530) 19530..19823 + 294 WP_032146011.1 hypothetical protein -
NIL09_RS25995 (19900) 19900..20583 + 684 WP_000085883.1 DNA methylase -
NIL09_RS26000 (20584) 20584..20805 + 222 WP_001104881.1 hypothetical protein -
NIL09_RS26005 (20819) 20819..21253 + 435 WP_000274503.1 DUF1380 family protein -
NIL09_RS26010 (21304) 21304..22080 + 777 WP_001383963.1 hypothetical protein -
NIL09_RS26015 (22498) 22498..22923 + 426 WP_001198928.1 antirestriction protein -
NIL09_RS26020 (22970) 22970..23392 + 423 WP_000271762.1 DUF1380 family protein -
NIL09_RS26025 (23389) 23389..23580 + 192 WP_001027493.1 hypothetical protein -
NIL09_RS26030 (23894) 23894..25561 - 1668 WP_012372796.1 group II intron reverse transcriptase/maturase -
NIL09_RS26035 (26290) 26290..26444 - 155 Protein_35 hypothetical protein -
NIL09_RS26040 (26961) 26961..27191 + 231 WP_000218642.1 hypothetical protein -
NIL09_RS26045 (27243) 27243..28604 + 1362 WP_000170695.1 DUF3560 domain-containing protein -
NIL09_RS26050 (28651) 28651..29214 + 564 WP_001298559.1 class I SAM-dependent methyltransferase -
NIL09_RS26055 (29300) 29300..29761 - 462 Protein_39 hypothetical protein -
NIL09_RS26060 (30063) 30063..30590 + 528 WP_000290834.1 single-stranded DNA-binding protein -
NIL09_RS26065 (30648) 30648..30881 + 234 WP_000006003.1 DUF905 family protein -
NIL09_RS26070 (30942) 30942..32965 + 2024 Protein_42 ParB/RepB/Spo0J family partition protein -
NIL09_RS26075 (33034) 33034..33468 + 435 WP_000845953.1 conjugation system SOS inhibitor PsiB -
NIL09_RS26080 (33465) 33465..34184 + 720 WP_001276217.1 plasmid SOS inhibition protein A -
- (34196) 34196..34420 + 225 NuclAT_0 - Antitoxin Detail
- (34196) 34196..34420 + 225 NuclAT_0 - Antitoxin Detail
- (34196) 34196..34420 + 225 NuclAT_0 - Antitoxin Detail
- (34196) 34196..34420 + 225 NuclAT_0 - Antitoxin Detail
NIL09_RS26085 (34406) 34406..34555 + 150 Protein_45 plasmid maintenance protein Mok -
NIL09_RS26090 (34497) 34497..34622 + 126 WP_001372321.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
NIL09_RS26095 (34941) 34941..35237 - 297 Protein_47 hypothetical protein -
NIL09_RS26100 (35537) 35537..35833 + 297 WP_001272251.1 hypothetical protein -
NIL09_RS26105 (35944) 35944..36765 + 822 WP_001234445.1 DUF932 domain-containing protein -
NIL09_RS26110 (37062) 37062..37709 - 648 WP_015059008.1 hypothetical protein VF
NIL09_RS26115 (37986) 37986..38369 + 384 WP_000124981.1 conjugal transfer relaxosome DNA-binding protein TraM -
NIL09_RS26120 (38560) 38560..39246 + 687 WP_015059009.1 PAS domain-containing protein -
NIL09_RS26125 (39340) 39340..39567 + 228 WP_001254386.1 conjugal transfer relaxosome protein TraY -
NIL09_RS26130 (39601) 39601..39966 + 366 WP_021519752.1 type IV conjugative transfer system pilin TraA -
NIL09_RS26135 (39981) 39981..40292 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
NIL09_RS26140 (40314) 40314..40880 + 567 WP_000399794.1 type IV conjugative transfer system protein TraE -
NIL09_RS26145 (40867) 40867..41595 + 729 WP_001230787.1 type-F conjugative transfer system secretin TraK -
NIL09_RS26150 (41595) 41595..43022 + 1428 WP_032297072.1 F-type conjugal transfer pilus assembly protein TraB -
NIL09_RS26155 (43012) 43012..43602 + 591 WP_000002778.1 conjugal transfer pilus-stabilizing protein TraP -
NIL09_RS26160 (43589) 43589..43786 + 198 WP_001324648.1 conjugal transfer protein TrbD -
NIL09_RS26165 (43798) 43798..44049 + 252 WP_001038341.1 conjugal transfer protein TrbG -
NIL09_RS26170 (44046) 44046..44561 + 516 WP_062955122.1 type IV conjugative transfer system lipoprotein TraV -
NIL09_RS26175 (44696) 44696..44917 + 222 WP_001278692.1 conjugal transfer protein TraR -
NIL09_RS26180 (45077) 45077..47704 + 2628 WP_015059012.1 type IV secretion system protein TraC -
NIL09_RS26185 (47701) 47701..48087 + 387 WP_015059013.1 type-F conjugative transfer system protein TrbI -
NIL09_RS26190 (48084) 48084..48716 + 633 WP_001203735.1 type-F conjugative transfer system protein TraW -
NIL09_RS26195 (48713) 48713..49705 + 993 WP_000830838.1 conjugal transfer pilus assembly protein TraU -
NIL09_RS26200 (49732) 49732..50040 + 309 WP_000412447.1 hypothetical protein -
NIL09_RS26205 (50103) 50103..50624 + 522 WP_015059014.1 hypothetical protein -
NIL09_RS26210 (50651) 50651..51256 + 606 Protein_70 type-F conjugative transfer system pilin assembly protein TrbC -
NIL09_RS26215 (51310) 51310..52014 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26220 (52152) 52152..53033 + 882 Protein_72 IS1182 family transposase ISKpn6 Transposase
NIL09_RS26225 (53283) 53283..54164 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
NIL09_RS26230 (54440) 54440..55420 - 981 WP_013213985.1 IS481 family transposase ISKpn27 Transposase
NIL09_RS26235 (55543) 55543..56004 - 462 Protein_75 Tn3 family transposase TnpR_Tn3 Transposase
NIL09_RS26240 (56056) 56056..56760 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26245 (56825) 56825..58075 - 1251 Protein_77 transposase -
NIL09_RS26250 (58150) 58150..58818 - 669 WP_001300294.1 putative signaling protein VF
NIL09_RS26255 (58854) 58854..59090 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
NIL09_RS26260 (59087) 59087..59449 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
NIL09_RS26265 (59467) 59467..61161 - 1695 WP_000105636.1 mercury(II) reductase -
NIL09_RS26270 (61213) 61213..61635 - 423 WP_001340589.1 organomercurial transporter MerC -
NIL09_RS26275 (61671) 61671..61946 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
NIL09_RS26280 (61960) 61960..62310 - 351 WP_001294663.1 mercuric transport protein MerT -
NIL09_RS26285 (62382) 62382..62816 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
NIL09_RS26290 (62895) 62895..63899 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
NIL09_RS26295 (64081) 64081..64353 - 273 WP_004883563.1 hypothetical protein -
NIL09_RS26300 (64481) 64481..65320 - 840 WP_000259031.1 Dihydropteroate synthase ARG
NIL09_RS26305 (65314) 65314..65661 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
NIL09_RS26310 (65778) 65778..66616 - 839 Protein_90 Streptomycin 3''-adenylyltransferase ARG
NIL09_RS26315 (66622) 66622..66912 - 291 WP_001336345.1 DUF1010 domain-containing protein -
NIL09_RS26320 (67024) 67024..67521 - 498 WP_001083725.1 IS1595 family transposase ISSsu9 ARG
NIL09_RS26325 (67666) 67666..68679 + 1014 WP_000845039.1 IS91 family transposase ISAzo26 Transposase
NIL09_RS26330 (68882) 68882..69022 + 141 Protein_94 EAL domain-containing protein -
NIL09_RS26335 (69085) 69085..69789 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26340 (69851) 69851..69964 - 114 Protein_96 recombinase family protein -
NIL09_RS26345 (70059) 70059..72956 + 2898 WP_001553819.1 Tn3 family transposase TnpA_Tn5403 Transposase
NIL09_RS26350 (73093) 73093..73494 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
NIL09_RS26355 (73427) 73427..73684 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
NIL09_RS26360 (73777) 73777..74430 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
NIL09_RS26365 (75369) 75369..76226 - 858 WP_032495102.1 incFII family plasmid replication initiator RepA -
NIL09_RS26370 (76245) 76245..76423 - 179 Protein_102 protein CopA/IncA -
NIL09_RS26375 (76538) 76538..76786 - 249 WP_000083837.1 replication regulatory protein RepA -
NIL09_RS26380 (77070) 77070..77219 - 150 WP_001312851.1 Hok/Gef family protein Toxin Detail
- (77264) 77264..77323 + 60 NuclAT_1 - Antitoxin Detail
- (77264) 77264..77323 + 60 NuclAT_1 - Antitoxin Detail
- (77264) 77264..77323 + 60 NuclAT_1 - Antitoxin Detail
- (77264) 77264..77323 + 60 NuclAT_1 - Antitoxin Detail
NIL09_RS26385 (77524) 77524..77856 - 333 WP_152916585.1 hypothetical protein -
NIL09_RS26390 (77918) 77918..78517 - 600 WP_032083981.1 PIN domain-containing protein -
NIL09_RS26395 (78903) 78903..79103 - 201 WP_015059022.1 hypothetical protein -
NIL09_RS26400 (79235) 79235..79795 - 561 WP_000139328.1 fertility inhibition protein FinO -
NIL09_RS26405 (79850) 79850..80596 - 747 WP_000205770.1 conjugal transfer pilus acetylase TraX -
NIL09_RS26410 (80616) 80616..80816 - 201 WP_072354025.1 hypothetical protein -
NIL09_RS26415 (80841) 80841..81545 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26420 (81598) 81598..81663 + 66 Protein_112 helix-turn-helix domain-containing protein -
NIL09_RS26425 (81666) 81666..84632 + 2967 WP_042863651.1 Tn3 family transposase TnpA_ISPa38 Transposase
NIL09_RS26430 (84711) 84711..85715 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
NIL09_RS26435 (85987) 85987..86073 - 87 Protein_115 Arm DNA-binding domain-containing protein -
NIL09_RS26440 (86195) 86195..86419 - 225 WP_000743213.1 hypothetical protein -
NIL09_RS26445 (86416) 86416..87153 - 738 WP_001446887.1 Tn3 family transposase TnpR_TnEc1 Transposase
NIL09_RS26450 (87639) 87639..87779 - 141 WP_001044210.1 hypothetical protein -
NIL09_RS26455 (87785) 87785..88489 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26460 (88569) 88569..89069 + 501 WP_001239317.1 hypothetical protein -
NIL09_RS26465 (89219) 89219..89860 + 642 WP_001011939.1 Chloramphenicol acetyltransferase 2 ARG
NIL09_RS26470 (89993) 89993..90697 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26475 (90823) 90823..91197 - 375 WP_008324180.1 hypothetical protein -
NIL09_RS26480 (91823) 91823..92182 - 360 WP_015493069.1 hypothetical protein -
NIL09_RS26485 (92244) 92244..92567 - 324 WP_008324183.1 hypothetical protein -
NIL09_RS26490 (92564) 92564..93292 - 729 WP_008324185.1 plasmid SOS inhibition protein A -
NIL09_RS26495 (93289) 93289..93720 - 432 WP_008324186.1 conjugation system SOS inhibitor PsiB -
NIL09_RS26500 (93763) 93763..95772 - 2010 Protein_128 ParB/RepB/Spo0J family partition protein -
NIL09_RS26505 (95843) 95843..96073 - 231 WP_015493071.1 DUF905 domain-containing protein -
NIL09_RS26510 (96358) 96358..96428 + 71 Protein_130 hypothetical protein -
NIL09_RS26515 (96699) 96699..97016 - 318 Protein_131 hypothetical protein -
NIL09_RS26520 (97051) 97051..97305 - 255 WP_015493072.1 DNA polymerase III subunit theta -
NIL09_RS26525 (97498) 97498..97689 - 192 WP_015493073.1 hypothetical protein -
NIL09_RS26530 (97732) 97732..98238 - 507 WP_015493074.1 antirestriction protein ArdA -
NIL09_RS26535 (98643) 98643..99422 - 780 WP_015493075.1 hypothetical protein -
NIL09_RS26540 (99476) 99476..99895 - 420 WP_015493076.1 DUF1380 family protein -
NIL09_RS26545 (99906) 99906..100127 - 222 WP_015493077.1 hypothetical protein -
NIL09_RS26550 (100127) 100127..100804 - 678 WP_002211749.1 DNA methylase -
NIL09_RS26555 (101163) 101163..101834 + 672 WP_015493079.1 SOS response-associated peptidase family protein -
NIL09_RS26560 (102014) 102014..102436 + 423 WP_015493080.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NIL09_RS26565 (102436) 102436..103707 + 1272 WP_015493081.1 Y-family DNA polymerase -
NIL09_RS26570 (103843) 103843..104814 - 972 WP_016479949.1 ParB family protein -
NIL09_RS26575 (104811) 104811..106016 - 1206 WP_015493083.1 Plasmid partition protein A VF
NIL09_RS26580 (106379) 106379..107011 + 633 WP_022652286.1 Tn3 family transposase TnpR_TnEc1 Transposase
NIL09_RS26585 (107065) 107065..107265 + 201 WP_040219232.1 hypothetical protein -
NIL09_RS26590 (107412) 107412..108362 + 951 WP_015493085.1 ISNCY family transposase ISRor2 VF
NIL09_RS26595 (108359) 108359..108970 - 612 WP_015493086.1 DUF2913 family protein -
NIL09_RS26600 (108967) 108967..109362 - 396 WP_015493087.1 hypothetical protein -
NIL09_RS26605 (109415) 109415..109807 - 393 Protein_149 3'-5' exonuclease -
NIL09_RS26610 (109876) 109876..110856 + 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
NIL09_RS26615 (110838) 110838..111380 + 543 WP_077273850.1 restriction endonuclease -
NIL09_RS26620 (111508) 111508..112065 + 558 WP_042934582.1 hypothetical protein -
NIL09_RS26625 (112534) 112534..113238 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
NIL09_RS26630 (113293) 113293..113658 - 366 Protein_154 type IV conjugative transfer system protein TraE -
NIL09_RS26635 (113678) 113678..113983 - 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
NIL09_RS26640 (113997) 113997..114365 - 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
NIL09_RS26645 (114427) 114427..114633 - 207 WP_171773970.1 TraY domain-containing protein -
NIL09_RS26650 (114748) 114748..115485 - 738 WP_013214018.1 conjugal transfer protein TrbJ -
NIL09_RS26655 (115685) 115685..116101 - 417 WP_014343494.1 conjugal transfer relaxosome DNA-binding protein TraM -
NIL09_RS26660 (116492) 116492..116977 + 486 WP_014343495.1 hypothetical protein VF
NIL09_RS26665 (117010) 117010..117339 - 330 WP_013214015.1 DUF5983 family protein -
NIL09_RS26670 (117372) 117372..118193 - 822 WP_004152492.1 DUF932 domain-containing protein -
NIL09_RS26675 (119022) 119022..119126 - 105 Protein_163 transcriptional regulator -
NIL09_RS26680 (119130) 119130..119408 - 279 WP_004152721.1 helix-turn-helix transcriptional regulator -
NIL09_RS26685 (119398) 119398..119718 - 321 WP_014343498.1 type II toxin-antitoxin system RelE/ParE family toxin -
NIL09_RS26690 (119765) 119765..119989 - 225 WP_014343499.1 hypothetical protein -
NIL09_RS26695 (120000) 120000..120212 - 213 WP_014343500.1 hypothetical protein -
NIL09_RS26700 (120273) 120273..120629 - 357 WP_014343501.1 hypothetical protein -
NIL09_RS26705 (121470) 121470..121787 - 318 WP_014343505.1 hypothetical protein -
NIL09_RS26710 (121802) 121802..122152 - 351 WP_040245917.1 hypothetical protein -
NIL09_RS26715 (122149) 122149..122421 - 273 WP_040245921.1 hypothetical protein -
NIL09_RS26720 (123114) 123114..123230 - 117 WP_055313929.1 type I toxin-antitoxin system Hok family toxin -
NIL09_RS26725 (123181) 123181..123330 - 150 Protein_173 FlmC family protein -
NIL09_RS26730 (123500) 123500..123874 - 375 WP_014343510.1 hypothetical protein -
NIL09_RS26735 (123930) 123930..124256 - 327 WP_013023807.1 hypothetical protein -
NIL09_RS26740 (124253) 124253..124981 - 729 WP_001568058.1 plasmid SOS inhibition protein A -
NIL09_RS26745 (124978) 124978..125409 - 432 WP_001568057.1 conjugation system SOS inhibitor PsiB -
NIL09_RS26750 (125454) 125454..127511 - 2058 WP_015493064.1 ParB/RepB/Spo0J family partition protein -
NIL09_RS26755 (127581) 127581..127829 - 249 WP_001568055.1 DUF905 domain-containing protein -
NIL09_RS26760 (127878) 127878..128420 - 543 WP_014343512.1 single-stranded DNA-binding protein -
NIL09_RS26765 (129253) 129253..129816 - 564 WP_014343514.1 methyltransferase -
NIL09_RS26770 (129864) 129864..131219 - 1356 WP_014343515.1 DUF3560 domain-containing protein -
NIL09_RS26775 (131271) 131271..131501 - 231 WP_001568051.1 hypothetical protein -
NIL09_RS26780 (131593) 131593..131820 - 228 WP_001568050.1 hypothetical protein -
NIL09_RS26785 (132500) 132500..132820 - 321 WP_001568049.1 hypothetical protein -
NIL09_RS26790 (132855) 132855..133109 - 255 WP_011977779.1 DNA polymerase III subunit theta -
NIL09_RS26795 (133297) 133297..133488 - 192 WP_001568047.1 hypothetical protein -
NIL09_RS26800 (133531) 133531..134037 - 507 WP_013214014.1 antirestriction protein ArdA -
NIL09_RS26805 (134080) 134080..134508 - 429 WP_001568045.1 antirestriction protein -
NIL09_RS26810 (135189) 135189..135956 - 768 WP_013214013.1 hypothetical protein -
NIL09_RS26815 (136010) 136010..136429 - 420 WP_001568043.1 DUF1380 domain-containing protein -
NIL09_RS26820 (136439) 136439..136660 - 222 WP_001568042.1 hypothetical protein -
NIL09_RS26825 (136660) 136660..137361 - 702 WP_001568041.1 DNA methylase -
NIL09_RS26830 (137433) 137433..137602 - 170 Protein_194 hypothetical protein -
NIL09_RS26835 (137798) 137798..138028 - 231 WP_001568040.1 hypothetical protein -
NIL09_RS26840 (138091) 138091..138762 - 672 WP_013214012.1 plasmid partitioning/stability family protein -
NIL09_RS26845 (138765) 138765..139736 - 972 WP_004152353.1 plasmid segregation protein ParM -
NIL09_RS26850 (139970) 139970..140401 + 432 WP_001568036.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
NIL09_RS26855 (140401) 140401..141672 + 1272 WP_004197646.1 Y-family DNA polymerase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance