MGE detailed information
MGE type: Conjugative plasmid MGE length: 134731 bp
Accession: NZ_CP100077 Location: 1..134731 Organism: Klebsiella pneumoniae strain RJKP36 Replicon: plasmid pRJKP36-1
Accession: NZ_CP100077 Location: 1..134731 Organism: Klebsiella pneumoniae strain RJKP36 Replicon: plasmid pRJKP36-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIL00_RS25550 (61) | 61..756 | - | 696 | WP_220317147.1 | IS6 family transposase IS26 | Transposase |
| NIL00_RS25555 (812) | 812..1210 | + | 399 | Protein_1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| NIL00_RS25560 (1257) | 1257..1907 | + | 651 | WP_015065500.1 | SOS response-associated peptidase | - |
| NIL00_RS25565 (2204) | 2204..3199 | + | 996 | WP_019725651.1 | hypothetical protein | - |
| NIL00_RS25570 (3272) | 3272..3595 | + | 324 | WP_019725650.1 | hypothetical protein | - |
| NIL00_RS25575 (4015) | 4015..4647 | + | 633 | Protein_5 | hypothetical protein | - |
| NIL00_RS25580 (4676) | 4676..6075 | - | 1400 | Protein_6 | ISNCY-like element ISKpn21 family transposase | - |
| NIL00_RS25585 (6187) | 6187..7719 | + | 1533 | WP_023288255.1 | IS3 family transposase ISKpn38 | Transposase |
| NIL00_RS25590 (7991) | 7991..8593 | + | 603 | Protein_8 | IS200-IS605 family transposase ISEc42 | Transposase |
| NIL00_RS25595 (8662) | 8662..9089 | - | 428 | Protein_9 | DNA-binding protein | - |
| NIL00_RS25600 (9067) | 9067..9472 | + | 406 | Protein_10 | DUF4113 domain-containing protein | - |
| NIL00_RS25605 (9650) | 9650..9973 | + | 324 | WP_032720638.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NIL00_RS25610 (10022) | 10022..10324 | + | 303 | WP_032720637.1 | NadS family protein | Antitoxin Detail |
| NIL00_RS25615 (10367) | 10367..10534 | - | 168 | WP_153591440.1 | hypothetical protein | - |
| NIL00_RS25620 (10722) | 10722..10928 | - | 207 | WP_153591439.1 | hypothetical protein | - |
| NIL00_RS25625 (10925) | 10925..11308 | - | 384 | WP_032720636.1 | hypothetical protein | - |
| NIL00_RS25630 (11413) | 11413..11985 | - | 573 | WP_032720635.1 | GNAT family N-acetyltransferase | - |
| NIL00_RS25635 (11987) | 11987..12799 | - | 813 | WP_223203129.1 | TSUP family transporter | - |
| NIL00_RS25640 (12811) | 12811..13731 | - | 921 | WP_050548604.1 | TauD/TfdA family dioxygenase | - |
| NIL00_RS25645 (14034) | 14034..14527 | - | 494 | Protein_19 | DNA-binding protein | - |
| NIL00_RS25650 (14558) | 14558..15128 | - | 571 | Protein_20 | hypothetical protein | - |
| NIL00_RS25655 (15125) | 15125..15373 | - | 249 | WP_044266751.1 | hypothetical protein | - |
| NIL00_RS25660 (15939) | 15939..16283 | + | 345 | WP_058650054.1 | hypothetical protein | - |
| NIL00_RS25665 (16391) | 16391..17026 | - | 636 | WP_016338367.1 | type II CAAX endopeptidase family protein | - |
| NIL00_RS25670 (17026) | 17026..19134 | - | 2109 | WP_016338368.1 | peptidase domain-containing ABC transporter | - |
| NIL00_RS25675 (19124) | 19124..20401 | - | 1278 | WP_016338369.1 | HlyD family secretion protein | - |
| NIL00_RS25680 (21060) | 21060..21596 | + | 537 | WP_223825639.1 | hypothetical protein | - |
| NIL00_RS25685 (21614) | 21614..21937 | + | 324 | WP_085842301.1 | hypothetical protein | - |
| NIL00_RS25690 (21978) | 21978..22394 | - | 417 | WP_032425563.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NIL00_RS25695 (22391) | 22391..22621 | - | 231 | WP_016338373.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| NIL00_RS25700 (22839) | 22839..23753 | - | 915 | WP_126834912.1 | Abi family protein | - |
| NIL00_RS25705 (24046) | 24046..24999 | - | 954 | WP_109549184.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| NIL00_RS25710 (25107) | 25107..25370 | + | 264 | Protein_32 | hypothetical protein | - |
| NIL00_RS25715 (25540) | 25540..25758 | + | 219 | WP_006788213.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NIL00_RS25720 (25760) | 25760..26065 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NIL00_RS25725 (26234) | 26234..26629 | + | 396 | WP_017899885.1 | hypothetical protein | - |
| NIL00_RS25730 (26656) | 26656..26970 | + | 315 | WP_053389906.1 | hypothetical protein | - |
| NIL00_RS25735 (26981) | 26981..27997 | + | 1017 | WP_017899884.1 | hypothetical protein | - |
| NIL00_RS25740 (28195) | 28195..28987 | + | 793 | Protein_38 | site-specific integrase | - |
| NIL00_RS25745 (29427) | 29427..29729 | - | 303 | WP_071571079.1 | hypothetical protein | - |
| NIL00_RS25750 (29726) | 29726..30352 | - | 627 | WP_004197649.1 | hypothetical protein | VF |
| NIL00_RS25755 (31001) | 31001..31876 | - | 876 | WP_004098982.1 | replication initiation protein | - |
| NIL00_RS25760 (32288) | 32288..33553 | - | 1266 | Protein_42 | translesion error-prone DNA polymerase V subunit UmuC | - |
| NIL00_RS25765 (33553) | 33553..33983 | - | 431 | Protein_43 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| NIL00_RS25770 (34217) | 34217..35184 | + | 968 | Protein_44 | plasmid segregation protein ParM | - |
| NIL00_RS25775 (35187) | 35187..35857 | + | 671 | Protein_45 | plasmid partitioning/stability family protein | - |
| NIL00_RS25780 (35920) | 35920..36119 | + | 200 | Protein_46 | hypothetical protein | - |
| NIL00_RS25785 (36342) | 36342..36511 | + | 170 | Protein_47 | hypothetical protein | - |
| NIL00_RS25790 (36583) | 36583..37281 | + | 699 | Protein_48 | DNA methylase | - |
| NIL00_RS25795 (37281) | 37281..37502 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| NIL00_RS25800 (37512) | 37512..37930 | + | 419 | Protein_50 | DUF1380 domain-containing protein | - |
| NIL00_RS25805 (38034) | 38034..38749 | + | 716 | Protein_51 | hypothetical protein | - |
| NIL00_RS25810 (39425) | 39425..39851 | + | 427 | Protein_52 | antirestriction protein | - |
| NIL00_RS25815 (39894) | 39894..40399 | + | 506 | Protein_53 | antirestriction protein ArdA | - |
| NIL00_RS25820 (40441) | 40441..40617 | + | 177 | Protein_54 | hypothetical protein | - |
| NIL00_RS25825 (40814) | 40814..41068 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| NIL00_RS25830 (41102) | 41102..41422 | + | 321 | WP_032436760.1 | hypothetical protein | - |
| NIL00_RS25835 (42154) | 42154..42381 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| NIL00_RS25840 (42456) | 42456..42701 | + | 246 | WP_110225350.1 | hypothetical protein | - |
| NIL00_RS25845 (42749) | 42749..44156 | + | 1408 | Protein_59 | DUF3560 domain-containing protein | - |
| NIL00_RS25850 (44146) | 44146..44703 | + | 558 | Protein_60 | methyltransferase | - |
| NIL00_RS25855 (45046) | 45046..45219 | + | 174 | WP_264279085.1 | hypothetical protein | - |
| NIL00_RS25860 (45527) | 45527..46069 | + | 543 | WP_126834928.1 | single-stranded DNA-binding protein | - |
| NIL00_RS25865 (46118) | 46118..46366 | + | 249 | WP_004182058.1 | DUF905 domain-containing protein | - |
| NIL00_RS25870 (46436) | 46436..48488 | + | 2053 | Protein_64 | ParB/RepB/Spo0J family partition protein | - |
| NIL00_RS25875 (48533) | 48533..48961 | + | 429 | Protein_65 | conjugation system SOS inhibitor PsiB | - |
| NIL00_RS25880 (48958) | 48958..49686 | + | 729 | WP_064152328.1 | plasmid SOS inhibition protein A | - |
| NIL00_RS25885 (49683) | 49683..50009 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| NIL00_RS25890 (50065) | 50065..50438 | + | 374 | Protein_68 | hypothetical protein | - |
| - (50498) | 50498..50621 | + | 124 | NuclAT_0 | - | - |
| - (50498) | 50498..50621 | + | 124 | NuclAT_0 | - | - |
| - (50498) | 50498..50621 | + | 124 | NuclAT_0 | - | - |
| - (50498) | 50498..50621 | + | 124 | NuclAT_0 | - | - |
| NIL00_RS25895 (50621) | 50621..51693 | - | 1073 | Protein_69 | IS481 family transposase ISKpn28 | Transposase |
| NIL00_RS25900 (51805) | 51805..51921 | + | 117 | WP_055313929.1 | type I toxin-antitoxin system Hok family toxin | - |
| NIL00_RS25905 (52605) | 52605..52875 | + | 271 | Protein_71 | hypothetical protein | - |
| NIL00_RS25910 (52865) | 52865..53221 | + | 357 | WP_264279087.1 | hypothetical protein | - |
| NIL00_RS25915 (53849) | 53849..54205 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| NIL00_RS25920 (54266) | 54266..54477 | + | 212 | Protein_74 | hypothetical protein | - |
| NIL00_RS25925 (54488) | 54488..54712 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| NIL00_RS25930 (54793) | 54793..55112 | + | 320 | Protein_76 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NIL00_RS25935 (55102) | 55102..55380 | + | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| NIL00_RS25940 (55381) | 55381..55793 | + | 413 | Protein_78 | helix-turn-helix domain-containing protein | - |
| NIL00_RS25945 (56609) | 56609..57427 | + | 819 | Protein_79 | DUF945 domain-containing protein | - |
| NIL00_RS25950 (57460) | 57460..57786 | + | 327 | Protein_80 | DUF5983 family protein | - |
| NIL00_RS25955 (57819) | 57819..58302 | - | 484 | Protein_81 | hypothetical protein | VF |
| NIL00_RS25960 (58734) | 58734..59126 | + | 393 | WP_004194114.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NIL00_RS25965 (59356) | 59356..60057 | + | 702 | WP_004194113.1 | hypothetical protein | - |
| NIL00_RS25970 (60143) | 60143..60343 | + | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| NIL00_RS25975 (60412) | 60412..60780 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| NIL00_RS25980 (60794) | 60794..61098 | + | 305 | Protein_86 | type IV conjugative transfer system protein TraL | - |
| NIL00_RS25985 (61118) | 61118..61774 | + | 657 | WP_264279086.1 | type IV conjugative transfer system protein TraE | - |
| NIL00_RS25990 (61801) | 61801..62406 | + | 606 | Protein_88 | type-F conjugative transfer system secretin TraK | - |
| NIL00_RS25995 (62406) | 62406..63820 | + | 1415 | Protein_89 | conjugal transfer protein TraB | - |
| NIL00_RS26000 (63893) | 63893..64477 | + | 585 | WP_032440547.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NIL00_RS26005 (64800) | 64800..65018 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| NIL00_RS26010 (65019) | 65019..65329 | + | 311 | Protein_92 | hypothetical protein | - |
| NIL00_RS26015 (65396) | 65396..65799 | + | 404 | Protein_93 | hypothetical protein | - |
| NIL00_RS26020 (66178) | 66178..66574 | + | 397 | Protein_94 | hypothetical protein | - |
| NIL00_RS26025 (66646) | 66646..69277 | + | 2632 | Protein_95 | type IV secretion system protein TraC | - |
| NIL00_RS26030 (69277) | 69277..69666 | + | 390 | WP_126834917.1 | type-F conjugative transfer system protein TrbI | - |
| NIL00_RS26035 (69666) | 69666..70290 | + | 625 | Protein_97 | type-F conjugative transfer system protein TraW | - |
| NIL00_RS26040 (70310) | 70310..71293 | + | 984 | WP_223176982.1 | conjugal transfer pilus assembly protein TraU | - |
| NIL00_RS26045 (71308) | 71308..71856 | + | 549 | WP_022631518.1 | hypothetical protein | - |
| NIL00_RS26050 (71831) | 71831..72520 | - | 690 | WP_126834916.1 | hypothetical protein | - |
| NIL00_RS26055 (72577) | 72577..73179 | + | 603 | WP_022631520.1 | hypothetical protein | - |
| NIL00_RS26060 (73324) | 73324..73971 | + | 648 | WP_042946323.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NIL00_RS26065 (74030) | 74030..75967 | + | 1938 | Protein_103 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NIL00_RS26070 (75999) | 75999..76253 | + | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| NIL00_RS26075 (76231) | 76231..76479 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| NIL00_RS26080 (76521) | 76521..76816 | + | 296 | Protein_106 | hypothetical protein | - |
| NIL00_RS26085 (76837) | 76837..77587 | + | 751 | Protein_107 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NIL00_RS26090 (77598) | 77598..77836 | + | 239 | Protein_108 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NIL00_RS26095 (77808) | 77808..78379 | + | 572 | Protein_109 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NIL00_RS26100 (78372) | 78372..78800 | + | 429 | WP_015065560.1 | hypothetical protein | - |
| NIL00_RS26105 (78787) | 78787..80162 | + | 1376 | Protein_111 | conjugal transfer protein TraH | - |
| NIL00_RS26110 (80155) | 80155..82994 | + | 2840 | Protein_112 | conjugal transfer mating pair stabilization protein TraG | - |
| NIL00_RS26115 (83005) | 83005..83529 | + | 525 | WP_015065538.1 | hypothetical protein | - |
| NIL00_RS26120 (83838) | 83838..84566 | + | 729 | Protein_114 | complement resistance protein TraT | - |
| NIL00_RS26125 (84758) | 84758..85446 | + | 689 | Protein_115 | hypothetical protein | - |
| NIL00_RS26130 (85575) | 85575..87883 | + | 2309 | Protein_116 | type IV conjugative transfer system coupling protein TraD | - |
| NIL00_RS26135 (87883) | 87883..93165 | + | 5283 | Protein_117 | conjugative transfer relaxase/helicase TraI | - |
| NIL00_RS26140 (93204) | 93204..93929 | + | 726 | WP_015065543.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| NIL00_RS26145 (94085) | 94085..94677 | + | 593 | Protein_119 | fertility inhibition protein FinO | - |
| NIL00_RS26150 (94836) | 94836..95436 | + | 601 | Protein_120 | PIN domain-containing protein | - |
| NIL00_RS26155 (95485) | 95485..96129 | + | 645 | WP_015065546.1 | hypothetical protein | - |
| NIL00_RS26160 (96185) | 96185..96830 | + | 646 | Protein_122 | DUF2726 domain-containing protein | - |
| NIL00_RS26165 (96827) | 96827..97134 | + | 308 | Protein_123 | hypothetical protein | - |
| NIL00_RS26170 (97236) | 97236..97787 | + | 552 | WP_015065550.1 | Cardiolipin synthase A | VF |
| NIL00_RS26175 (97923) | 97923..98192 | + | 270 | WP_022631531.1 | replication regulatory protein RepA | - |
| NIL00_RS26180 (98404) | 98404..98481 | + | 78 | WP_014386216.1 | RepA leader peptide Tap | - |
| NIL00_RS26185 (98474) | 98474..99025 | + | 552 | WP_022631532.1 | plasmid replication initiator RepA | - |
| NIL00_RS26190 (99018) | 99018..100031 | + | 1014 | WP_015065551.1 | plasmid replication initiator RepA | - |
| NIL00_RS26195 (100118) | 100118..100821 | + | 704 | Protein_129 | IS6 family transposase IS15DII | Transposase |
| NIL00_RS26200 (100928) | 100928..101290 | + | 363 | WP_264279079.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NIL00_RS26205 (101287) | 101287..101625 | - | 339 | WP_264279081.1 | hypothetical protein | - |
| NIL00_RS26210 (102447) | 102447..103285 | + | 839 | Protein_132 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NIL00_RS26215 (103323) | 103323..103586 | + | 264 | WP_264279088.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| NIL00_RS26220 (104216) | 104216..104946 | + | 731 | Protein_134 | Tn3 family transposase TnpA_IS3000 | Transposase |
| NIL00_RS26225 (104930) | 104930..105456 | + | 527 | Protein_135 | Tn3 family transposase TnpA_IS3000 | Transposase |
| NIL00_RS26230 (105532) | 105532..105932 | + | 401 | Protein_136 | Psp operon transcriptional activator | VF |
| NIL00_RS26235 (106025) | 106025..106667 | + | 643 | Protein_137 | hypothetical protein | ARG |
| NIL00_RS26240 (106725) | 106725..107488 | - | 764 | Protein_138 | putative oxidoreductase YghA | VF |
| NIL00_RS26245 (107538) | 107538..108241 | - | 704 | Protein_139 | IS6 family transposase IS15DII | Transposase |
| NIL00_RS26250 (108305) | 108305..108394 | - | 90 | Protein_140 | recombinase family protein | - |
| NIL00_RS26255 (108786) | 108786..109797 | - | 1012 | Protein_141 | IS91 family transposase ISAzo26 | Transposase |
| NIL00_RS26260 (109951) | 109951..110422 | + | 472 | Protein_142 | trimethoprim-resistant dihydrofolate reductase DfrA14 | - |
| NIL00_RS26265 (110642) | 110642..110794 | + | 153 | Protein_143 | hypothetical protein | Relaxase |
| NIL00_RS26270 (110868) | 110868..110933 | + | 66 | Protein_144 | hypothetical protein | Relaxase |
| NIL00_RS26275 (111051) | 111051..111812 | + | 762 | Protein_145 | IS6-like element IS6100 family transposase | - |
| NIL00_RS26280 (111952) | 111952..112017 | - | 66 | Protein_146 | EAL domain-containing protein | - |
| NIL00_RS26285 (112078) | 112078..113281 | + | 1204 | Protein_147 | type II site-specific deoxyribonuclease | - |
| NIL00_RS26290 (113315) | 113315..114742 | - | 1428 | Protein_148 | DNA cytosine methyltransferase | - |
| NIL00_RS26295 (114841) | 114841..115063 | + | 223 | Protein_149 | IS1 family transposase | - |
| NIL00_RS26300 (115061) | 115061..115762 | - | 702 | Protein_150 | IS6 family transposase IS15DI | Transposase |
| NIL00_RS26305 (115864) | 115864..118609 | - | 2746 | Protein_151 | Tn3-like element Tn3 family transposase | - |
| NIL00_RS26310 (118623) | 118623..118966 | + | 344 | Protein_152 | WbuC family cupin fold metalloprotein | - |
| NIL00_RS26315 (119011) | 119011..119851 | - | 841 | Protein_153 | Beta-lactamase CTX-M-1 | ARG |
| NIL00_RS26320 (120137) | 120137..121396 | - | 1260 | Protein_154 | IS1380-like element ISEcp1 family transposase | - |
| NIL00_RS26325 (121578) | 121578..121796 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NIL00_RS26330 (121960) | 121960..122517 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NIL00_RS26335 (122700) | 122700..123560 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NIL00_RS26340 (123770) | 123770..124174 | + | 405 | Protein_158 | IS91 family transposase ISPps1 | Transposase |
| NIL00_RS26345 (124281) | 124281..125117 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| NIL00_RS26350 (125117) | 125117..125920 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NIL00_RS26355 (125981) | 125981..126796 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| NIL00_RS26360 (127126) | 127126..127212 | + | 87 | Protein_162 | Arm DNA-binding domain-containing protein | - |
| NIL00_RS26365 (127484) | 127484..128486 | - | 1003 | Protein_163 | IS110 family transposase IS5075 | Transposase |
| NIL00_RS26370 (128565) | 128565..130028 | - | 1464 | Protein_164 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| NIL00_RS26375 (130085) | 130085..130789 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NIL00_RS26380 (130930) | 130930..131085 | + | 156 | WP_000075580.1 | hypothetical protein | - |
| NIL00_RS26385 (131134) | 131134..132126 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| NIL00_RS26390 (132183) | 132183..132314 | + | 132 | Protein_168 | ISNCY family transposase | - |
| NIL00_RS26395 (132311) | 132311..132922 | - | 612 | WP_000176305.1 | DUF2913 family protein | - |
| NIL00_RS26400 (132976) | 132976..133257 | - | 282 | WP_001568067.1 | hypothetical protein | - |
| NIL00_RS26405 (133439) | 133439..133765 | + | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|