MGE detailed information
MGE type: Prophage MGE length: 10744 bp
Accession: NZ_CP099705 Location: 311679..322422 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ Replicon: chromosome
Accession: NZ_CP099705 Location: 311679..322422 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013+ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NG892_RS01395 (307099) | 307099..308154 | + | 1056 | WP_001081707.1 | permease-like cell division protein FtsX | - |
| NG892_RS01400 (308400) | 308400..309254 | + | 855 | WP_000159621.1 | RNA polymerase sigma factor RpoH | - |
| NG892_RS01405 (309576) | 309576..310679 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| NG892_RS01410 (310762) | 310762..310896 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| NG892_RS01415 (310874) | 310874..311257 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| NG892_RS01420 (311679) | 311679..312788 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| NG892_RS01425 (312848) | 312848..313774 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| NG892_RS01430 (313771) | 313771..315048 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| NG892_RS01435 (315045) | 315045..315812 | + | 768 | WP_000082083.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NG892_RS01440 (315814) | 315814..316527 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| NG892_RS01445 (316659) | 316659..316880 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NG892_RS01450 (316877) | 316877..317245 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NG892_RS01455 (317504) | 317504..318820 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| NG892_RS01460 (318884) | 318884..319771 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| NG892_RS01465 (319768) | 319768..320613 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| NG892_RS01470 (320615) | 320615..321685 | + | 1071 | WP_000907838.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| NG892_RS01475 (321682) | 321682..322422 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| NG892_RS01480 (322435) | 322435..322851 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| NG892_RS01485 (322977) | 322977..324719 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| NG892_RS01490 (324764) | 324764..325798 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| NG892_RS01495 (325795) | 325795..326766 | - | 972 | WP_001038951.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0.006 |