MGE detailed information
MGE type: Conjugative plasmid MGE length: 67408 bp
Accession: NZ_CP099591 Location: 1..67408 Organism: Escherichia coli strain WG1 Replicon: plasmid unnamed
Accession: NZ_CP099591 Location: 1..67408 Organism: Escherichia coli strain WG1 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHF37_RS22730 (1) | 1..858 | + | 858 | WP_000774301.1 | incFII family plasmid replication initiator RepA | - |
| NHF37_RS22735 (1792) | 1792..2676 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| NHF37_RS22740 (2672) | 2672..2841 | + | 170 | Protein_3 | resolvase | - |
| NHF37_RS22745 (3096) | 3096..3242 | + | 147 | Protein_4 | 3'-5' exonuclease | - |
| NHF37_RS22750 (3434) | 3434..6109 | - | 2676 | WP_000233113.1 | hypothetical protein | - |
| NHF37_RS22755 (6336) | 6336..6626 | + | 291 | WP_000538310.1 | hypothetical protein | - |
| NHF37_RS22760 (6616) | 6616..7515 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| NHF37_RS22765 (7565) | 7565..9790 | - | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| NHF37_RS22770 (9792) | 9792..10880 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| NHF37_RS22775 (11460) | 11460..11678 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NHF37_RS22780 (11680) | 11680..11985 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NHF37_RS22785 (11986) | 11986..12792 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| NHF37_RS22790 (13566) | 13566..14321 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| NHF37_RS22795 (14909) | 14909..16075 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| NHF37_RS22800 (16075) | 16075..17046 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NHF37_RS22805 (17999) | 17999..18900 | + | 902 | Protein_16 | DUF1281 domain-containing protein | - |
| NHF37_RS22810 (18904) | 18904..19209 | + | 306 | WP_010892536.1 | hypothetical protein | - |
| NHF37_RS22815 (19286) | 19286..19969 | + | 684 | WP_000085939.1 | DNA methylase | - |
| NHF37_RS22820 (19970) | 19970..20191 | + | 222 | WP_001104904.1 | hypothetical protein | - |
| NHF37_RS22825 (20085) | 20085..20639 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| NHF37_RS22830 (20685) | 20685..21461 | + | 777 | WP_001005032.1 | hypothetical protein | - |
| NHF37_RS22835 (21875) | 21875..22300 | + | 426 | WP_001198920.1 | antirestriction protein | - |
| NHF37_RS22840 (22347) | 22347..22769 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| NHF37_RS22845 (22766) | 22766..22957 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| NHF37_RS22850 (23763) | 23763..24302 | + | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| NHF37_RS22855 (24359) | 24359..24592 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| NHF37_RS22860 (24658) | 24658..26616 | + | 1959 | WP_000117173.1 | ParB/RepB/Spo0J family partition protein | - |
| NHF37_RS22865 (26671) | 26671..27105 | + | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| NHF37_RS22870 (27102) | 27102..27864 | + | 763 | Protein_29 | plasmid SOS inhibition protein A | - |
| - (27833) | 27833..28031 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (27833) | 27833..28031 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (27833) | 27833..28031 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (27833) | 27833..28031 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| NHF37_RS22875 (28038) | 28038..28187 | + | 150 | Protein_30 | DUF5431 family protein | - |
| NHF37_RS22880 (28129) | 28129..28254 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| NHF37_RS22885 (28555) | 28555..28851 | - | 297 | Protein_32 | hypothetical protein | - |
| NHF37_RS22890 (28921) | 28921..29127 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| NHF37_RS22895 (29152) | 29152..29439 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| NHF37_RS22900 (29558) | 29558..30379 | + | 822 | WP_001234417.1 | DUF932 domain-containing protein | - |
| NHF37_RS22905 (30675) | 30675..31277 | - | 603 | WP_000243701.1 | hypothetical protein | VF |
| NHF37_RS22910 (31598) | 31598..31981 | + | 384 | WP_001151527.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NHF37_RS22915 (32168) | 32168..32857 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| NHF37_RS22920 (32950) | 32950..33351 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| NHF37_RS22925 (33384) | 33384..33749 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| NHF37_RS22930 (33764) | 33764..34075 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| NHF37_RS22935 (34097) | 34097..34663 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| NHF37_RS22940 (34650) | 34650..35378 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| NHF37_RS22945 (35378) | 35378..36805 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| NHF37_RS22950 (36795) | 36795..37385 | + | 591 | WP_000002792.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| NHF37_RS22955 (37372) | 37372..37569 | + | 198 | WP_001443030.1 | conjugal transfer protein TrbD | - |
| NHF37_RS22960 (37581) | 37581..37832 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| NHF37_RS22965 (37829) | 37829..38344 | + | 516 | WP_000809843.1 | type IV conjugative transfer system lipoprotein TraV | - |
| NHF37_RS22970 (38479) | 38479..38700 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| NHF37_RS22975 (38860) | 38860..41487 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| NHF37_RS22980 (41484) | 41484..41870 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| NHF37_RS22985 (41867) | 41867..42499 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| NHF37_RS22990 (42496) | 42496..43488 | + | 993 | WP_000830185.1 | conjugal transfer pilus assembly protein TraU | - |
| NHF37_RS22995 (43497) | 43497..44135 | + | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| NHF37_RS23000 (44132) | 44132..45940 | + | 1809 | WP_000821835.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| NHF37_RS23005 (45967) | 45967..46224 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| NHF37_RS23010 (46217) | 46217..46960 | + | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NHF37_RS23015 (46976) | 46976..47323 | + | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| NHF37_RS23020 (47325) | 47325..47639 | - | 315 | WP_000415566.1 | protein ArtA | - |
| NHF37_RS23025 (47720) | 47720..48004 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NHF37_RS23030 (47991) | 47991..48536 | + | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NHF37_RS23035 (48466) | 48466..48807 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| NHF37_RS23040 (48794) | 48794..49174 | + | 381 | WP_001366201.1 | F-type conjugal transfer protein TrbF | - |
| NHF37_RS23045 (49174) | 49174..50547 | + | 1374 | WP_021553026.1 | conjugal transfer pilus assembly protein TraH | - |
| NHF37_RS23050 (50544) | 50544..53360 | + | 2817 | WP_001007055.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| NHF37_RS23055 (53393) | 53393..53914 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| NHF37_RS23060 (53939) | 53939..54670 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| NHF37_RS23065 (54923) | 54923..57076 | + | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| NHF37_RS23070 (57085) | 57085..57483 | - | 399 | WP_000911324.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| NHF37_RS23075 (57483) | 57483..57710 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NHF37_RS23080 (57792) | 57792..63062 | + | 5271 | WP_000987005.1 | Multifunctional conjugation protein TraI | Relaxase |
| NHF37_RS23085 (63082) | 63082..63828 | + | 747 | WP_000205776.1 | conjugal transfer pilus acetylase TraX | - |
| NHF37_RS23090 (63883) | 63883..64443 | + | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| NHF37_RS23095 (64578) | 64578..64766 | + | 189 | WP_001345829.1 | hypothetical protein | - |
| NHF37_RS23100 (64964) | 64964..65050 | + | 87 | Protein_75 | endonuclease | - |
| NHF37_RS23105 (65231) | 65231..65542 | - | 312 | WP_000802277.1 | hypothetical protein | - |
| - (65838) | 65838..65899 | - | 62 | NuclAT_1 | - | - |
| - (65838) | 65838..65899 | - | 62 | NuclAT_1 | - | - |
| - (65838) | 65838..65899 | - | 62 | NuclAT_1 | - | - |
| - (65838) | 65838..65899 | - | 62 | NuclAT_1 | - | - |
| NHF37_RS23110 (65943) | 65943..66092 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| NHF37_RS23115 (66376) | 66376..66633 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| NHF37_RS23120 (66867) | 66867..66941 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|