MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP099590 Location: 1103772..1135652 Organism: Escherichia coli strain WG1 Replicon: chromosome
Accession: NZ_CP099590 Location: 1103772..1135652 Organism: Escherichia coli strain WG1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NHF37_RS05295 (1099956) | 1099956..1101224 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| NHF37_RS05300 (1101244) | 1101244..1102221 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| NHF37_RS05305 (1102557) | 1102557..1104809 | - | 2253 | Protein_1045 | alpha-amylase family glycosyl hydrolase | - |
| NHF37_RS05315 (1106195) | 1106195..1107568 | + | 1374 | Protein_1046 | DUF5507 domain-containing protein | - |
| NHF37_RS23165 (1107962) | 1107962..1108141 | + | 180 | WP_087676347.1 | DNA invertase | - |
| NHF37_RS05325 (1108296) | 1108296..1108415 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| NHF37_RS05330 (1108480) | 1108480..1113060 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| NHF37_RS05335 (1113424) | 1113424..1113753 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| NHF37_RS05340 (1113774) | 1113774..1114091 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| NHF37_RS05345 (1114129) | 1114129..1114329 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| NHF37_RS05350 (1114338) | 1114338..1114820 | - | 483 | WP_001407480.1 | RadC family protein | - |
| NHF37_RS05355 (1114829) | 1114829..1115287 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| NHF37_RS05360 (1115390) | 1115390..1115574 | - | 185 | Protein_1055 | DUF905 family protein | - |
| NHF37_RS05365 (1116185) | 1116185..1117888 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| NHF37_RS05370 (1118030) | 1118030..1119039 | + | 1010 | Protein_1057 | arsenic transporter | - |
| NHF37_RS05375 (1119052) | 1119052..1119204 | + | 153 | Protein_1058 | arsenate reductase | - |
| NHF37_RS05380 (1119591) | 1119591..1120058 | - | 468 | WP_000702495.1 | protein YfjT | - |
| NHF37_RS05385 (1120082) | 1120082..1120525 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| NHF37_RS05390 (1120525) | 1120525..1120761 | - | 237 | WP_001144029.1 | protein YpjK | - |
| NHF37_RS05395 (1120802) | 1120802..1121503 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| NHF37_RS05400 (1121720) | 1121720..1122541 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| NHF37_RS05405 (1122633) | 1122633..1123496 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| NHF37_RS05410 (1123851) | 1123851..1124222 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| NHF37_RS05415 (1124215) | 1124215..1125288 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| NHF37_RS05420 (1125430) | 1125430..1125693 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| NHF37_RS05425 (1126053) | 1126053..1127669 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| NHF37_RS05430 (1127666) | 1127666..1129855 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| NHF37_RS05435 (1130033) | 1130033..1130659 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| NHF37_RS05440 (1130812) | 1130812..1132221 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| NHF37_RS05445 (1132350) | 1132350..1132562 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| NHF37_RS05450 (1132606) | 1132606..1133562 | + | 957 | WP_000510827.1 | protein YfjH | - |
| NHF37_RS05455 (1133806) | 1133806..1135047 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| NHF37_RS05465 (1135828) | 1135828..1136310 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| NHF37_RS05470 (1136481) | 1136481..1136918 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| NHF37_RS05475 (1136908) | 1136908..1137198 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| NHF37_RS05480 (1137260) | 1137260..1137601 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| NHF37_RS05485 (1137750) | 1137750..1139411 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| NHF37_RS05490 (1139497) | 1139497..1140375 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |