MGE detailed information
MGE type: Genomic_island MGE length: 13974 bp
Accession: NZ_CP098834 Location: 3720920..3734893 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 Replicon: chromosome
Accession: NZ_CP098834 Location: 3720920..3734893 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH28_RS18520 () | 3716491..3718935 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NFH28_RS18525 () | 3719044..3719811 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| NFH28_RS18530 () | 3720182..3720589 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NFH28_RS18535 () | 3720920..3721639 | + | 720 | WP_022630913.1 | Outer membrane protein PagN | VF |
| NFH28_RS18540 () | 3721643..3721858 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| NFH28_RS18545 () | 3721975..3722922 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NFH28_RS18550 () | 3723414..3723654 | - | 241 | Protein_3636 | PerC family transcriptional regulator | - |
| NFH28_RS18555 () | 3723737..3724558 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NFH28_RS18560 () | 3724964..3725434 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| NFH28_RS18565 () | 3725456..3727966 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| NFH28_RS18570 () | 3727990..3728727 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| NFH28_RS18575 () | 3728811..3729323 | - | 513 | WP_077248260.1 | pilus assembly protein | - |
| NFH28_RS18580 () | 3730073..3730777 | - | 705 | Protein_3642 | integrase core domain-containing protein | - |
| NFH28_RS18585 () | 3730830..3731078 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NFH28_RS18590 () | 3731180..3731488 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| NFH28_RS18595 () | 3731571..3731744 | - | 174 | WP_088131292.1 | RHS repeat-associated core domain-containing protein | - |
| - | 3731772..3732194 | - | 423 | - | - | Antitoxin Detail |
| NFH28_RS18600 () | 3731929..3732204 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| NFH28_RS18605 () | 3732257..3732694 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NFH28_RS18610 () | 3733257..3733703 | - | 447 | WP_000935097.1 | protein SciX | - |
| NFH28_RS18615 () | 3733697..3734566 | - | 870 | Protein_3649 | hypothetical protein | VF |
| NFH28_RS18620 () | 3734630..3734893 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| NFH28_RS18625 () | 3734887..3738981 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NFH28_RS18630 () | 3739000..3739446 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.002 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.002 |