MGE detailed information
MGE type: Prophage MGE length: 8652 bp
Accession: NZ_CP098834 Location: 314044..322695 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 Replicon: chromosome
Accession: NZ_CP098834 Location: 314044..322695 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain GD19PS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NFH28_RS01400 (309849) | 309849..310952 | + | 1104 | WP_001521443.1 | branched chain amino acid ABC transporter substrate-binding protein LivJ | - |
| NFH28_RS01405 (311035) | 311035..311169 | - | 135 | WP_001517957.1 | hypothetical protein | - |
| NFH28_RS01410 (311147) | 311147..311530 | - | 384 | WP_000778873.1 | aspartate 1-decarboxylase autocleavage activator PanM | - |
| NFH28_RS01415 (311952) | 311952..313061 | + | 1110 | WP_000822976.1 | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | - |
| NFH28_RS01420 (313121) | 313121..314047 | + | 927 | WP_000003007.1 | high-affinity branched-chain amino acid ABC transporter permease LivH | - |
| NFH28_RS01425 (314044) | 314044..315321 | + | 1278 | WP_000803766.1 | branched chain amino acid ABC transporter permease LivM | - |
| NFH28_RS01430 (315318) | 315318..316085 | + | 768 | WP_000082083.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| NFH28_RS01435 (316087) | 316087..316800 | + | 714 | WP_000416114.1 | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | - |
| NFH28_RS01440 (316932) | 316932..317153 | + | 222 | WP_001520924.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NFH28_RS01445 (317150) | 317150..317518 | + | 369 | WP_001521773.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| NFH28_RS01450 (317777) | 317777..319093 | + | 1317 | WP_000624747.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| NFH28_RS01455 (319157) | 319157..320044 | + | 888 | WP_000099303.1 | sn-glycerol-3-phosphate ABC transporter permease UgpA | - |
| NFH28_RS01460 (320041) | 320041..320886 | + | 846 | WP_000572196.1 | sn-glycerol-3-phosphate ABC transporter permease UgpE | - |
| NFH28_RS01465 (320888) | 320888..321958 | + | 1071 | WP_000907838.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| NFH28_RS01470 (321955) | 321955..322695 | + | 741 | WP_000073548.1 | glycerophosphodiester phosphodiesterase | - |
| NFH28_RS01475 (322708) | 322708..323124 | - | 417 | WP_000826041.1 | DUF2756 family protein | - |
| NFH28_RS01480 (323250) | 323250..324992 | + | 1743 | WP_000805096.1 | gamma-glutamyltransferase | - |
| NFH28_RS01485 (325037) | 325037..326071 | - | 1035 | WP_000675710.1 | phosphotriesterase | - |
| NFH28_RS01490 (326068) | 326068..327039 | - | 972 | WP_001038948.1 | DMT family transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Prophage | TA25959 | NC_016810 | 3744081..3752732 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26059 | NC_016856 | 3736457..3745108 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297241 | UFRD01000002 | 3923220..3931871 | 0 |