MGE detailed information
MGE type: Genomic_island MGE length: 14289 bp
Accession: NZ_CP098741 Location: 3408714..3423002 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Accession: NZ_CP098741 Location: 3408714..3423002 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain HJL222 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCG87_RS16250 () | 3403738..3404184 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| NCG87_RS16255 () | 3404203..3408297 | + | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| NCG87_RS16260 () | 3408291..3408554 | + | 264 | WP_000932531.1 | hypothetical protein | - |
| NCG87_RS16265 () | 3408618..3409487 | + | 870 | Protein_3160 | hypothetical protein | VF |
| NCG87_RS16270 () | 3409481..3409927 | + | 447 | WP_000935097.1 | protein SciX | - |
| NCG87_RS16275 () | 3410490..3410927 | + | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| NCG87_RS16280 () | 3410980..3411255 | - | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 3410990..3411412 | + | 423 | - | - | Antitoxin Detail |
| NCG87_RS16285 () | 3411497..3411613 | + | 117 | WP_227457392.1 | hypothetical protein | - |
| NCG87_RS16290 () | 3411696..3412004 | + | 309 | WP_010988969.1 | hypothetical protein | - |
| NCG87_RS16295 () | 3412106..3412354 | - | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| NCG87_RS16300 () | 3412407..3413111 | + | 705 | Protein_3167 | integrase core domain-containing protein | - |
| NCG87_RS16305 () | 3413861..3414373 | + | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| NCG87_RS16310 () | 3414457..3415194 | + | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| NCG87_RS16315 () | 3415218..3417728 | + | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| NCG87_RS16320 () | 3417750..3418220 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| NCG87_RS16325 () | 3418626..3419447 | + | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| NCG87_RS16330 () | 3419530..3419770 | + | 241 | Protein_3173 | PerC family transcriptional regulator | - |
| NCG87_RS16335 () | 3420262..3421209 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| NCG87_RS16340 () | 3421326..3421541 | + | 216 | WP_001575654.1 | hypothetical protein | - |
| NCG87_RS16345 () | 3421545..3422264 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| NCG87_RS16350 () | 3422595..3423002 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| NCG87_RS16355 () | 3423373..3424140 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| NCG87_RS16360 () | 3424249..3426693 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| NCG87_RS16365 () | 3426933..3427511 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0 |