MGE detailed information
MGE type: Genomic_island MGE length: 14133 bp
Accession: NZ_CP098701 Location: 3186962..3201094 Organism: Yersinia ruckeri strain NVI-5089 Replicon: chromosome
Accession: NZ_CP098701 Location: 3186962..3201094 Organism: Yersinia ruckeri strain NVI-5089 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND440_RS14645 (ND440_14640) | 3183229..3185634 | - | 2406 | WP_248578661.1 | polysaccharide lyase 8 family protein | - |
| ND440_RS14650 (ND440_14645) | 3186222..3186914 | - | 693 | WP_038245321.1 | oligogalacturonate-specific porin KdgM family protein | - |
| ND440_RS14655 (ND440_14650) | 3186962..3188116 | - | 1155 | WP_038245380.1 | N-acetylneuraminate epimerase | - |
| ND440_RS14660 (ND440_14655) | 3188719..3188892 | - | 174 | Protein_2840 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| ND440_RS14665 (ND440_14660) | 3188918..3189043 | - | 126 | Protein_2841 | antirestriction protein | - |
| ND440_RS14670 (ND440_14665) | 3189411..3190361 | - | 951 | WP_038275283.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| ND440_RS14675 (ND440_14670) | 3190354..3190749 | - | 396 | WP_038245317.1 | DUF6088 family protein | Antitoxin Detail |
| ND440_RS14680 (ND440_14675) | 3190824..3191054 | - | 231 | Protein_2844 | DUF4942 domain-containing protein | - |
| ND440_RS14685 (ND440_14680) | 3191204..3191332 | + | 129 | Protein_2845 | helix-turn-helix domain-containing protein | - |
| ND440_RS14690 (ND440_14685) | 3191325..3191445 | + | 121 | Protein_2846 | transposase | - |
| ND440_RS14695 (ND440_14690) | 3191474..3191770 | - | 297 | Protein_2847 | IS3 family transposase IS1400 | Transposase |
| ND440_RS14700 (ND440_14695) | 3191769..3192167 | + | 399 | Protein_2848 | integrase core domain-containing protein | - |
| ND440_RS14705 (ND440_14700) | 3192186..3192452 | - | 267 | Protein_2849 | hypothetical protein | - |
| ND440_RS14710 (ND440_14705) | 3192473..3193540 | - | 1068 | WP_096823272.1 | macro domain-containing protein | Antitoxin Detail |
| ND440_RS14715 (ND440_14710) | 3193537..3194193 | - | 657 | WP_096823271.1 | DUF4433 domain-containing protein | Toxin Detail |
| ND440_RS14720 (ND440_14715) | 3194196..3194771 | - | 576 | WP_234049239.1 | DarT ssDNA thymidine ADP-ribosyltransferase family protein | - |
| ND440_RS14725 (ND440_14720) | 3194895..3195284 | - | 390 | WP_234049240.1 | restriction endonuclease subunit S | - |
| ND440_RS14730 (ND440_14725) | 3195548..3195838 | - | 291 | WP_038275268.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND440_RS14735 (ND440_14730) | 3195828..3196082 | - | 255 | WP_005175264.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| ND440_RS14745 (ND440_14740) | 3197428..3197673 | + | 246 | Protein_2857 | restriction endonuclease | - |
| ND440_RS14750 (ND440_14745) | 3197813..3201094 | - | 3282 | WP_265318713.1 | HsdR family type I site-specific deoxyribonuclease | - |
| ND440_RS14755 (ND440_14750) | 3201185..3202660 | - | 1476 | WP_265320458.1 | restriction endonuclease subunit S | - |
| ND440_RS14760 (ND440_14755) | 3202650..3204254 | - | 1605 | WP_265318559.1 | class I SAM-dependent DNA methyltransferase | - |
| ND440_RS14765 (ND440_14760) | 3204468..3204706 | - | 239 | Protein_2861 | transposase | - |
| ND440_RS14770 (ND440_14765) | 3204704..3204859 | + | 156 | Protein_2862 | transposase | - |
| ND440_RS14775 (ND440_14770) | 3205050..3205979 | - | 930 | WP_265318560.1 | S-4TM family putative pore-forming effector | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|