MGE detailed information
MGE type: Genomic_island MGE length: 11650 bp
Accession: NZ_CP098438 Location: 3662565..3674214 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Replicon: chromosome
Accession: NZ_CP098438 Location: 3662565..3674214 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ATOMSal-L6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M9193_RS17855 () | 3658365..3659132 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| M9193_RS17860 () | 3659503..3659910 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| M9193_RS17865 () | 3660241..3660960 | + | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| M9193_RS17870 () | 3660964..3661179 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| M9193_RS17875 () | 3661296..3662243 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| M9193_RS17880 () | 3662735..3662975 | - | 241 | Protein_3497 | PerC family transcriptional regulator | - |
| M9193_RS17885 () | 3663058..3663879 | - | 822 | WP_000119390.1 | polysaccharide deacetylase family protein | - |
| M9193_RS17890 () | 3664285..3664755 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| M9193_RS17895 () | 3664777..3667287 | - | 2511 | WP_000669634.1 | F1 capsule-anchoring protein | VF |
| M9193_RS17900 () | 3667311..3668048 | - | 738 | WP_001535430.1 | Chaperone protein caf1M | VF |
| M9193_RS17905 () | 3668132..3668644 | - | 513 | WP_010988970.1 | Saf-pilin pilus formation protein SafA | - |
| M9193_RS17910 () | 3669394..3670098 | - | 705 | Protein_3503 | integrase core domain-containing protein | - |
| M9193_RS17915 () | 3670151..3670399 | + | 249 | WP_001738030.1 | SymE family type I addiction module toxin | - |
| M9193_RS17920 () | 3670501..3670809 | - | 309 | WP_010988969.1 | hypothetical protein | - |
| M9193_RS17925 () | 3670892..3671008 | - | 117 | WP_227457392.1 | hypothetical protein | - |
| - | 3671093..3671515 | - | 423 | - | - | Antitoxin Detail |
| M9193_RS17930 () | 3671250..3671525 | + | 276 | WP_000994224.1 | SymE family type I addiction module toxin | Toxin Detail |
| M9193_RS17935 () | 3671578..3672015 | - | 438 | WP_000943619.1 | immunity 26/phosphotriesterase HocA family protein | - |
| M9193_RS17940 () | 3672578..3673024 | - | 447 | WP_000935097.1 | protein SciX | - |
| M9193_RS17945 () | 3673018..3673887 | - | 870 | Protein_3510 | hypothetical protein | VF |
| M9193_RS17950 () | 3673951..3674214 | - | 264 | WP_000932531.1 | hypothetical protein | - |
| M9193_RS17955 () | 3674208..3678302 | - | 4095 | WP_000272656.1 | RHS repeat-associated core domain-containing protein | - |
| M9193_RS17960 () | 3678321..3678767 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | Genomic island | TA10103 | NC_016810 | 336540..350828 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Genomic island | TA26042 | NC_016856 | 337747..352035 | 0.006 |