MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 68250 bp
Accession: NZ_CP098185 Location: 1..68250 Organism: Escherichia coli strain Z0117EC0133 Replicon: plasmid pZ0117ECO0133-2
Accession: NZ_CP098185 Location: 1..68250 Organism: Escherichia coli strain Z0117EC0133 Replicon: plasmid pZ0117ECO0133-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBY27_RS24335 (1159) | 1159..1305 | + | 147 | WP_240091252.1 | PerC family transcriptional regulator | - |
| NBY27_RS24340 (1392) | 1392..1811 | + | 420 | WP_064484994.1 | IS66 family transposase ISEc23 | Transposase |
| NBY27_RS24345 (1808) | 1808..2158 | + | 351 | WP_000624710.1 | IS66 family transposase ISEc47 | Transposase |
| NBY27_RS24350 (2189) | 2189..3802 | + | 1614 | Protein_4 | IS66 family transposase ISEc43 | Transposase |
| NBY27_RS24355 (4585) | 4585..4908 | + | 324 | WP_074400360.1 | Major pilu subunit operon regulatory protein PapB | VF |
| NBY27_RS24360 (5276) | 5276..5794 | + | 519 | WP_064484996.1 | Major MR/P fimbria protein | VF |
| NBY27_RS24365 (5895) | 5895..8309 | + | 2415 | WP_064484997.1 | Outer membrane usher protein FimD | VF |
| NBY27_RS24370 (8302) | 8302..8994 | + | 693 | WP_250791037.1 | Chaperone protein FaeE | VF |
| NBY27_RS24375 (9467) | 9467..9991 | + | 525 | WP_064484999.1 | type 1 fimbrial protein | - |
| NBY27_RS24380 (10093) | 10093..11004 | + | 912 | WP_250791039.1 | hypothetical protein | - |
| NBY27_RS24385 (11137) | 11137..12105 | + | 969 | WP_077770019.1 | IS5 family transposase IS903B | Transposase |
| NBY27_RS24390 (12196) | 12196..12423 | + | 228 | WP_250791041.1 | hypothetical protein | - |
| NBY27_RS24395 (12574) | 12574..12789 | - | 216 | WP_064485016.1 | hypothetical protein | - |
| NBY27_RS24400 (13387) | 13387..14229 | - | 843 | Protein_14 | CDF family zinc transporter ZitB | - |
| NBY27_RS24405 (14486) | 14486..14596 | + | 111 | Protein_15 | IS5/IS1182 family transposase | - |
| NBY27_RS24410 (14654) | 14654..15622 | - | 969 | WP_077770019.1 | IS5 family transposase IS903B | Transposase |
| NBY27_RS24415 (16050) | 16050..17018 | + | 969 | WP_077770019.1 | IS5 family transposase IS903B | Transposase |
| NBY27_RS24420 (17753) | 17753..18493 | + | 741 | WP_034173276.1 | tyrosine-type recombinase/integrase | - |
| NBY27_RS24425 (18778) | 18778..19755 | - | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| NBY27_RS24435 (22098) | 22098..22457 | + | 360 | WP_198519727.1 | hypothetical protein | - |
| NBY27_RS24440 (23114) | 23114..23449 | - | 336 | WP_064484607.1 | hypothetical protein | - |
| NBY27_RS24445 (23446) | 23446..24840 | - | 1395 | WP_250791043.1 | hypothetical protein | - |
| NBY27_RS24450 (24948) | 24948..26519 | - | 1572 | WP_064484605.1 | IS66 family transposase ISCro1 | Transposase |
| NBY27_RS24455 (26539) | 26539..26886 | - | 348 | WP_064484604.1 | IS66 family transposase ISCro1 | Transposase |
| NBY27_RS24460 (26886) | 26886..27281 | - | 396 | Protein_26 | IS66 family transposase ISCro1 | Transposase |
| NBY27_RS24470 (28761) | 28761..29003 | + | 243 | WP_256500719.1 | tyrosine-type recombinase/integrase | - |
| NBY27_RS24475 (29378) | 29378..30583 | + | 1206 | WP_021559039.1 | Plasmid partition protein A | VF |
| NBY27_RS24480 (30580) | 30580..31542 | + | 963 | WP_097333565.1 | ParB family protein | - |
| NBY27_RS24485 (31683) | 31683..31853 | - | 171 | Protein_31 | DUF4113 domain-containing protein | - |
| NBY27_RS24490 (31956) | 31956..32222 | + | 267 | Protein_32 | hypothetical protein | - |
| NBY27_RS24495 (32217) | 32217..32336 | + | 120 | Protein_33 | hypothetical protein | - |
| NBY27_RS24500 (33043) | 33043..33195 | - | 153 | WP_157901341.1 | hypothetical protein | - |
| NBY27_RS24505 (33474) | 33474..33812 | + | 339 | WP_021559037.1 | hypothetical protein | Toxin Detail |
| NBY27_RS24510 (33812) | 33812..34123 | + | 312 | WP_021559036.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| NBY27_RS24515 (34476) | 34476..34745 | + | 270 | Protein_37 | ParA family protein | - |
| NBY27_RS24520 (34742) | 34742..35041 | + | 300 | Protein_38 | chromosome partitioning protein ParB | - |
| NBY27_RS24525 (35119) | 35119..35858 | + | 740 | Protein_39 | IS3 family transposase IS2 | Transposase |
| NBY27_RS24530 (35818) | 35818..36042 | + | 225 | WP_250791047.1 | IS3 family transposase IS2 | Transposase |
| NBY27_RS24535 (36040) | 36040..36194 | - | 155 | Protein_41 | IS3 family transposase IS2 | Transposase |
| NBY27_RS24540 (36712) | 36712..36942 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| NBY27_RS24545 (36994) | 36994..38388 | + | 1395 | WP_064484940.1 | DUF3560 domain-containing protein | - |
| NBY27_RS24550 (38402) | 38402..38965 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| NBY27_RS24555 (39117) | 39117..39356 | + | 240 | WP_071587082.1 | hypothetical protein | - |
| NBY27_RS24560 (39597) | 39597..39857 | + | 261 | WP_000547943.1 | hypothetical protein | - |
| NBY27_RS24565 (39974) | 39974..40792 | - | 819 | Protein_47 | IS110 family transposase IS1663 | Transposase |
| NBY27_RS24575 (42117) | 42117..42215 | - | 99 | Protein_49 | IS110 family transposase | - |
| NBY27_RS24580 (42575) | 42575..42808 | + | 234 | Protein_50 | conjugal transfer protein TraN | - |
| NBY27_RS24585 (42835) | 42835..43092 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| NBY27_RS24590 (43085) | 43085..43828 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| NBY27_RS24595 (43844) | 43844..44191 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| NBY27_RS24600 (44310) | 44310..44594 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBY27_RS24605 (44581) | 44581..45126 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| NBY27_RS24610 (45116) | 45116..45430 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| NBY27_RS24615 (45384) | 45384..45776 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| NBY27_RS24620 (45763) | 45763..46914 | + | 1152 | WP_250791033.1 | conjugal transfer pilus assembly protein TraH | - |
| NBY27_RS24625 (46865) | 46865..49180 | + | 2316 | Protein_59 | conjugal transfer mating-pair stabilization protein TraG | - |
| NBY27_RS24630 (49199) | 49199..49696 | + | 498 | WP_250791035.1 | entry exclusion protein | - |
| NBY27_RS24635 (49728) | 49728..50459 | + | 732 | WP_053285825.1 | conjugal transfer complement resistance protein TraT | - |
| NBY27_RS24640 (50531) | 50531..51142 | + | 612 | WP_000908442.1 | hypothetical protein | - |
| NBY27_RS24645 (51424) | 51424..51937 | + | 514 | Protein_63 | TraD N-terminal domain-containing protein | - |
| NBY27_RS24650 (51996) | 51996..52142 | + | 147 | WP_249517175.1 | hypothetical protein | - |
| NBY27_RS24655 (52072) | 52072..52308 | + | 237 | Protein_65 | TraX family protein | - |
| NBY27_RS24660 (52363) | 52363..52923 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| NBY27_RS24665 (53059) | 53059..53247 | + | 189 | WP_001345829.1 | hypothetical protein | - |
| NBY27_RS24670 (53445) | 53445..53531 | + | 87 | Protein_68 | endonuclease | - |
| NBY27_RS24675 (53712) | 53712..54023 | - | 312 | WP_000802277.1 | hypothetical protein | - |
| - (54319) | 54319..54380 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (54319) | 54319..54380 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (54319) | 54319..54380 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| - (54319) | 54319..54380 | - | 62 | NuclAT_0 | - | Antitoxin Detail |
| NBY27_RS24680 (54424) | 54424..54573 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| NBY27_RS24685 (54857) | 54857..55114 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| NBY27_RS24690 (55348) | 55348..55422 | + | 75 | WP_001442103.1 | RepA leader peptide Tap | - |
| NBY27_RS24695 (55415) | 55415..55897 | + | 483 | WP_074400318.1 | hypothetical protein | - |
| NBY27_RS24700 (55890) | 55890..56747 | + | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| NBY27_RS24705 (57699) | 57699..57950 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| NBY27_RS24710 (57947) | 57947..58234 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NBY27_RS24715 (58602) | 58602..58715 | - | 114 | Protein_77 | alkaline phosphatase | - |
| NBY27_RS24720 (58714) | 58714..58919 | + | 206 | Protein_78 | hypothetical protein | - |
| NBY27_RS24725 (59092) | 59092..62589 | - | 3498 | WP_064484791.1 | hypothetical protein | VF |
| NBY27_RS24730 (63175) | 63175..63420 | - | 246 | Protein_80 | IS91 family transposase | - |
| NBY27_RS24735 (63482) | 63482..63607 | - | 126 | Protein_81 | IS3 family transposase | - |
| NBY27_RS24740 (63644) | 63644..64612 | + | 969 | WP_077770019.1 | IS5 family transposase IS903B | Transposase |
| NBY27_RS24745 (64990) | 64990..65171 | + | 182 | Protein_83 | hypothetical protein | - |
| NBY27_RS24750 (65232) | 65232..65396 | - | 165 | WP_064484992.1 | DUF4223 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|