MGE detailed information
MGE type: Prophage MGE length: 53653 bp
Accession: NZ_CP097528 Location: 4377660..4431312 Organism: Pseudomonas putida strain KT2440 isolate pMBEC6 Replicon: chromosome
Accession: NZ_CP097528 Location: 4377660..4431312 Organism: Pseudomonas putida strain KT2440 isolate pMBEC6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M8003_RS20195 (M8003_20165) | 4373001..4374971 | + | 1971 | WP_061405675.1 | calcium-binding protein | - |
| M8003_RS20200 (M8003_20170) | 4375050..4375295 | - | 246 | WP_049587960.1 | hypothetical protein | - |
| M8003_RS20205 (M8003_20175) | 4375292..4375585 | - | 294 | WP_049587959.1 | hypothetical protein | - |
| M8003_RS20210 (M8003_20180) | 4375659..4375883 | - | 225 | WP_049587957.1 | hypothetical protein | - |
| M8003_RS20215 (M8003_20185) | 4376098..4377585 | - | 1488 | WP_061405677.1 | sialidase family protein | - |
| M8003_RS20220 (M8003_20190) | 4377660..4378190 | - | 531 | WP_049587950.1 | DUF2514 domain-containing protein | - |
| M8003_RS20225 (M8003_20195) | 4378187..4378726 | - | 540 | WP_010954681.1 | glycoside hydrolase family 104 protein | - |
| M8003_RS20230 (M8003_20200) | 4378815..4379183 | + | 369 | WP_061405678.1 | YceK/YidQ family lipoprotein | - |
| M8003_RS20235 (M8003_20205) | 4379128..4379352 | - | 225 | WP_010954682.1 | hypothetical protein | - |
| M8003_RS20240 (M8003_20210) | 4379775..4380539 | - | 765 | WP_010954683.1 | hypothetical protein | - |
| M8003_RS20245 (M8003_20215) | 4380551..4382803 | - | 2253 | WP_010954684.1 | hypothetical protein | - |
| M8003_RS20250 (M8003_20220) | 4382871..4383062 | - | 192 | WP_049587948.1 | hypothetical protein | - |
| M8003_RS20255 (M8003_20225) | 4383065..4383868 | - | 804 | WP_010954685.1 | tail protein | - |
| M8003_RS20260 (M8003_20230) | 4383871..4384515 | - | 645 | WP_010954686.1 | YmfQ family protein | - |
| M8003_RS20265 (M8003_20235) | 4384506..4385549 | - | 1044 | WP_010954687.1 | baseplate J/gp47 family protein | - |
| M8003_RS20270 (M8003_20240) | 4385539..4385925 | - | 387 | WP_010954688.1 | phage GP46 family protein | - |
| M8003_RS20275 (M8003_20245) | 4385922..4386422 | - | 501 | WP_010954689.1 | phage baseplate assembly protein V | - |
| M8003_RS20280 (M8003_20250) | 4386431..4387540 | - | 1110 | WP_010954690.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| M8003_RS20285 (M8003_20255) | 4387544..4388806 | - | 1263 | WP_010954691.1 | DNA circularization N-terminal domain-containing protein | - |
| M8003_RS20290 (M8003_20260) | 4388799..4390754 | - | 1956 | WP_010954692.1 | phage tail tape measure protein | - |
| M8003_RS20295 (M8003_20265) | 4390747..4390938 | - | 192 | WP_061405679.1 | hypothetical protein | - |
| M8003_RS20300 (M8003_20270) | 4390884..4391180 | - | 297 | WP_049587943.1 | phage tail assembly protein | - |
| M8003_RS20305 (M8003_20275) | 4391177..4391524 | - | 348 | WP_049587942.1 | phage tail tube protein | - |
| M8003_RS20310 (M8003_20280) | 4391607..4393028 | - | 1422 | WP_010951893.1 | group II intron reverse transcriptase/maturase | - |
| M8003_RS20315 (M8003_20285) | 4393498..4394985 | - | 1488 | WP_010954695.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| M8003_RS20320 (M8003_20290) | 4394985..4395188 | - | 204 | WP_010954696.1 | DUF2635 domain-containing protein | - |
| M8003_RS20325 (M8003_20295) | 4395194..4395787 | - | 594 | WP_049587778.1 | hypothetical protein | - |
| M8003_RS20330 (M8003_20300) | 4395817..4396332 | - | 516 | WP_010954699.1 | hypothetical protein | - |
| M8003_RS20335 (M8003_20305) | 4396325..4396699 | - | 375 | WP_010954700.1 | head-tail adaptor protein | - |
| M8003_RS20340 (M8003_20310) | 4396702..4397217 | - | 516 | WP_172835030.1 | hypothetical protein | - |
| M8003_RS20345 (M8003_20315) | 4397256..4397504 | - | 249 | WP_110771832.1 | hypothetical protein | - |
| M8003_RS20350 (M8003_20320) | 4397557..4398870 | - | 1314 | WP_049587776.1 | phage major capsid protein | - |
| M8003_RS20355 (M8003_20325) | 4398932..4399903 | - | 972 | WP_010954704.1 | S49 family peptidase | - |
| M8003_RS20360 (M8003_20330) | 4399900..4401171 | - | 1272 | WP_010954705.1 | phage portal protein | - |
| M8003_RS20365 (M8003_20335) | 4401174..4401362 | - | 189 | WP_010954706.1 | hypothetical protein | - |
| M8003_RS20370 (M8003_20340) | 4401359..4403167 | - | 1809 | WP_010954707.1 | terminase large subunit | - |
| M8003_RS20375 (M8003_20345) | 4403127..4403435 | - | 309 | WP_235436916.1 | phage terminase small subunit P27 family | - |
| M8003_RS20380 (M8003_20350) | 4403730..4404050 | - | 321 | WP_010954709.1 | HNH endonuclease | - |
| M8003_RS20385 (M8003_20355) | 4404054..4404377 | - | 324 | WP_010954710.1 | phage holin, lambda family | - |
| M8003_RS20390 (M8003_20360) | 4404536..4405165 | + | 630 | WP_061405680.1 | hypothetical protein | - |
| M8003_RS20395 (M8003_20365) | 4405314..4405574 | - | 261 | WP_010954712.1 | hypothetical protein | - |
| M8003_RS20400 (M8003_20370) | 4405558..4406229 | - | 672 | WP_010954713.1 | hypothetical protein | - |
| M8003_RS20405 (M8003_20375) | 4406242..4406523 | - | 282 | WP_235436917.1 | hypothetical protein | - |
| M8003_RS20410 (M8003_20380) | 4406559..4407857 | - | 1299 | WP_010954715.1 | hypothetical protein ; Integrase | Integrase |
| M8003_RS20415 (M8003_20385) | 4407854..4408282 | - | 429 | WP_049587773.1 | VRR-NUC domain-containing protein | - |
| M8003_RS20420 (M8003_20390) | 4408279..4408449 | - | 171 | WP_154070660.1 | hypothetical protein | - |
| M8003_RS20425 (M8003_20395) | 4408446..4408742 | - | 297 | WP_010954717.1 | DUF1364 domain-containing protein | - |
| M8003_RS20430 (M8003_20400) | 4408724..4408930 | - | 207 | WP_010954718.1 | hypothetical protein | - |
| M8003_RS20435 (M8003_20405) | 4408930..4410327 | - | 1398 | WP_010954719.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| M8003_RS20440 (M8003_20410) | 4410324..4411154 | - | 831 | WP_010954720.1 | replication protein | - |
| M8003_RS20445 (M8003_20415) | 4411479..4411691 | - | 213 | WP_010954721.1 | YdaS family helix-turn-helix protein | - |
| M8003_RS20450 (M8003_20420) | 4411779..4412426 | + | 648 | WP_010954722.1 | S24 family peptidase | - |
| M8003_RS20455 (M8003_20425) | 4412484..4412897 | + | 414 | WP_010954723.1 | HIRAN domain-containing protein | - |
| M8003_RS20460 (M8003_20430) | 4412941..4413177 | + | 237 | WP_010954724.1 | hypothetical protein | - |
| M8003_RS20465 (M8003_20435) | 4413344..4414336 | + | 993 | WP_049587768.1 | hypothetical protein | - |
| M8003_RS20470 (M8003_20440) | 4414339..4414905 | + | 567 | WP_049587766.1 | hypothetical protein | - |
| M8003_RS20475 (M8003_20445) | 4415073..4415414 | - | 342 | WP_049587764.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| M8003_RS20480 (M8003_20450) | 4415414..4415662 | - | 249 | WP_010954726.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| M8003_RS20485 (M8003_20455) | 4415812..4416072 | + | 261 | WP_010954727.1 | DUF1654 domain-containing protein | - |
| M8003_RS20490 (M8003_20460) | 4416444..4416653 | + | 210 | WP_049587762.1 | hypothetical protein | - |
| M8003_RS20495 (M8003_20465) | 4417290..4417673 | + | 384 | WP_049587761.1 | helix-turn-helix transcriptional regulator | - |
| M8003_RS20500 (M8003_20470) | 4417693..4417962 | + | 270 | WP_010954732.1 | hypothetical protein | - |
| M8003_RS20505 (M8003_20475) | 4417959..4418417 | + | 459 | WP_010954733.1 | hypothetical protein | - |
| M8003_RS20510 (M8003_20480) | 4418499..4418849 | + | 351 | WP_010954734.1 | hypothetical protein | - |
| M8003_RS20515 (M8003_20485) | 4418863..4419141 | - | 279 | WP_010954735.1 | hypothetical protein | - |
| M8003_RS20520 (M8003_20490) | 4419248..4419799 | + | 552 | WP_049587760.1 | hypothetical protein | - |
| M8003_RS20525 (M8003_20495) | 4419814..4420197 | + | 384 | WP_010954737.1 | hypothetical protein | - |
| M8003_RS20530 (M8003_20500) | 4420265..4421926 | + | 1662 | WP_010954738.1 | DNA cytosine methyltransferase | - |
| M8003_RS20535 (M8003_20505) | 4421935..4422612 | + | 678 | WP_049587756.1 | hypothetical protein | - |
| M8003_RS20540 (M8003_20510) | 4422662..4422961 | - | 300 | WP_049587754.1 | hypothetical protein | - |
| M8003_RS20545 (M8003_20515) | 4423127..4423510 | + | 384 | WP_010954740.1 | hypothetical protein | - |
| M8003_RS20550 (M8003_20520) | 4423507..4423785 | + | 279 | WP_049587751.1 | hypothetical protein | - |
| M8003_RS20555 (M8003_20525) | 4423782..4424105 | + | 324 | WP_010954741.1 | hypothetical protein | - |
| M8003_RS20560 (M8003_20530) | 4424102..4424494 | + | 393 | WP_010954742.1 | DUF2591 domain-containing protein | - |
| M8003_RS20565 (M8003_20535) | 4424684..4424956 | - | 273 | WP_049587750.1 | hypothetical protein | - |
| M8003_RS20570 (M8003_20540) | 4425777..4426094 | + | 318 | WP_049587747.1 | hypothetical protein | - |
| M8003_RS20575 (M8003_20545) | 4426134..4426379 | + | 246 | WP_010954745.1 | DUF4224 domain-containing protein | - |
| M8003_RS20580 (M8003_20550) | 4426381..4427430 | + | 1050 | WP_010954746.1 | hypothetical protein ; Integrase | Integrase |
| M8003_RS20590 (M8003_20560) | 4427760..4428779 | - | 1020 | WP_010954747.1 | protease SohB | - |
| M8003_RS20595 (M8003_20565) | 4428977..4429687 | + | 711 | WP_010954748.1 | histidine phosphatase family protein | - |
| M8003_RS20600 (M8003_20570) | 4429744..4430061 | + | 318 | WP_003251077.1 | SCP2 sterol-binding domain-containing protein | - |
| M8003_RS20605 (M8003_20575) | 4430245..4431312 | + | 1068 | WP_010954749.1 | phosphotransferase family protein | - |
| M8003_RS20610 (M8003_20580) | 4431349..4432116 | + | 768 | WP_003251082.1 | SDR family oxidoreductase | - |
| M8003_RS20615 (M8003_20585) | 4432117..4432938 | - | 822 | WP_003251085.1 | class I SAM-dependent methyltransferase | - |
| M8003_RS20620 (M8003_20590) | 4433108..4433458 | - | 351 | WP_012051882.1 | hypothetical protein | - |
| M8003_RS20625 (M8003_20595) | 4433576..4433866 | + | 291 | WP_010954750.1 | RcnB family protein | - |
| M8003_RS20630 (M8003_20600) | 4434110..4434295 | + | 186 | WP_004577263.1 | hypothetical protein | - |
| M8003_RS20635 (M8003_20605) | 4434369..4434761 | + | 393 | WP_010954752.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas putida KT2440 | Prophage | TA20007 | AE015451 | 4377646..4431298 | 0 | |
| Pseudomonas putida KT2440 | Prophage | TA20570 | NC_002947 | 4377646..4431298 | 0 |