MGE detailed information
MGE type: Conjugative plasmid MGE length: 50185 bp
Accession: NZ_CP097096 Location: 1..50185 Organism: Escherichia coli strain 258E Replicon: plasmid pEC258-1
Accession: NZ_CP097096 Location: 1..50185 Organism: Escherichia coli strain 258E Replicon: plasmid pEC258-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY99_RS22590 (1) | 1..858 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| HPY99_RS22595 (1797) | 1797..2189 | + | 393 | WP_000616804.1 | histidine phosphatase family protein | - |
| HPY99_RS22600 (2182) | 2182..2439 | + | 258 | WP_230133887.1 | CPBP family intramembrane metalloprotease | - |
| HPY99_RS22605 (2532) | 2532..2789 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HPY99_RS22610 (2722) | 2722..3123 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HPY99_RS22615 (3372) | 3372..4069 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| HPY99_RS22620 (4369) | 4369..5535 | + | 1167 | WP_001238646.1 | hypothetical protein | VF |
| HPY99_RS22625 (5535) | 5535..6506 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HPY99_RS22630 (7100) | 7100..7269 | + | 170 | Protein_9 | hypothetical protein | - |
| HPY99_RS22635 (7452) | 7452..7532 | - | 81 | Protein_10 | hypothetical protein | - |
| HPY99_RS22640 (7602) | 7602..7808 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| HPY99_RS22645 (7834) | 7834..8373 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| HPY99_RS22650 (8441) | 8441..8674 | + | 234 | WP_000005987.1 | DUF905 family protein | - |
| HPY99_RS22655 (8702) | 8702..8899 | + | 198 | Protein_14 | hypothetical protein | - |
| HPY99_RS22660 (8954) | 8954..9388 | + | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| HPY99_RS22665 (9385) | 9385..10147 | + | 763 | Protein_16 | plasmid SOS inhibition protein A | - |
| HPY99_RS22670 (10116) | 10116..10304 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (10116) | 10116..10340 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (10116) | 10116..10340 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (10116) | 10116..10340 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (10116) | 10116..10340 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| HPY99_RS22675 (10326) | 10326..10475 | + | 150 | Protein_18 | plasmid maintenance protein Mok | - |
| HPY99_RS22680 (10417) | 10417..10542 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HPY99_RS22685 (10762) | 10762..10992 | + | 231 | WP_071586998.1 | hypothetical protein | - |
| HPY99_RS22690 (10990) | 10990..11162 | - | 173 | Protein_21 | hypothetical protein | - |
| HPY99_RS22695 (11232) | 11232..11438 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| HPY99_RS22700 (11463) | 11463..11750 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| HPY99_RS22705 (11868) | 11868..12689 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| HPY99_RS22710 (12986) | 12986..13576 | - | 591 | WP_001376243.1 | hypothetical protein | VF |
| HPY99_RS22715 (13909) | 13909..14292 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HPY99_RS22720 (14479) | 14479..15168 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| HPY99_RS22725 (15261) | 15261..15662 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HPY99_RS22730 (15695) | 15695..16060 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| HPY99_RS22735 (16075) | 16075..16386 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HPY99_RS22740 (16408) | 16408..16974 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HPY99_RS22745 (16961) | 16961..17689 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| HPY99_RS22750 (17689) | 17689..19116 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HPY99_RS22755 (19106) | 19106..19696 | + | 591 | WP_001376242.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| HPY99_RS22760 (19683) | 19683..19880 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| HPY99_RS22765 (19892) | 19892..20143 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| HPY99_RS22770 (20140) | 20140..20655 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HPY99_RS22775 (20790) | 20790..21011 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| HPY99_RS22780 (21171) | 21171..23798 | + | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| HPY99_RS22785 (23795) | 23795..24181 | + | 387 | WP_000099686.1 | type-F conjugative transfer system protein TrbI | - |
| HPY99_RS22790 (24178) | 24178..24810 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HPY99_RS22795 (24807) | 24807..25799 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| HPY99_RS22800 (25808) | 25808..26446 | + | 639 | WP_000777700.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HPY99_RS22805 (26443) | 26443..28251 | + | 1809 | WP_000821841.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HPY99_RS22810 (28278) | 28278..28535 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| HPY99_RS22815 (28528) | 28528..29271 | + | 744 | WP_001030393.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HPY99_RS22820 (29287) | 29287..29634 | + | 348 | WP_001287910.1 | conjugal transfer protein TrbA | - |
| HPY99_RS22825 (29636) | 29636..29950 | - | 315 | WP_001324103.1 | hypothetical protein | - |
| HPY99_RS22830 (30031) | 30031..30315 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HPY99_RS22835 (30302) | 30302..30847 | + | 546 | WP_000059851.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HPY99_RS22840 (30777) | 30777..31118 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| HPY99_RS22845 (31105) | 31105..31485 | + | 381 | WP_001389370.1 | F-type conjugal transfer protein TrbF | - |
| HPY99_RS22850 (31485) | 31485..32858 | + | 1374 | WP_001517790.1 | conjugal transfer pilus assembly protein TraH | - |
| HPY99_RS22855 (32855) | 32855..35677 | + | 2823 | WP_001007018.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| HPY99_RS22860 (35693) | 35693..36190 | + | 498 | WP_000605857.1 | entry exclusion protein | - |
| HPY99_RS22865 (36222) | 36222..36953 | + | 732 | WP_023565183.1 | conjugal transfer complement resistance protein TraT | - |
| HPY99_RS22870 (37206) | 37206..39359 | + | 2154 | WP_000009324.1 | type IV conjugative transfer system coupling protein TraD | - |
| HPY99_RS22875 (39368) | 39368..39766 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HPY99_RS22880 (39766) | 39766..39993 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HPY99_RS22885 (40075) | 40075..45345 | + | 5271 | WP_000986962.1 | Multifunctional conjugation protein TraI | Relaxase |
| HPY99_RS22890 (45365) | 45365..46111 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| HPY99_RS22895 (46170) | 46170..47030 | + | 861 | WP_249232969.1 | Quorum-quenching protein AidA | VF |
| HPY99_RS22900 (47133) | 47133..47693 | + | 561 | WP_000139315.1 | fertility inhibition protein FinO | - |
| HPY99_RS22905 (47829) | 47829..48041 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| HPY99_RS22910 (48287) | 48287..48361 | + | 75 | Protein_65 | endonuclease | - |
| - (48617) | 48617..48678 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (48617) | 48617..48678 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (48617) | 48617..48678 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (48617) | 48617..48678 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| HPY99_RS22915 (48722) | 48722..48871 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| HPY99_RS22920 (49155) | 49155..49412 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| HPY99_RS22925 (49429) | 49429..49680 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| HPY99_RS22930 (49671) | 49671..49718 | + | 48 | WP_229471593.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|