MGE detailed information
MGE type: Mobilizable plasmid MGE length: 67887 bp
Accession: NZ_CP095522 Location: 1..67887 Organism: Escherichia coli strain GN04171 Replicon: plasmid p4171-3
Accession: NZ_CP095522 Location: 1..67887 Organism: Escherichia coli strain GN04171 Replicon: plasmid p4171-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MW404_RS24375 (1) | 1..1339 | - | 1339 | WP_171883548.1 | IS66-like element ISEc23 family transposase | - |
| MW404_RS24380 (1370) | 1370..1720 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| MW404_RS24385 (1717) | 1717..2142 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| MW404_RS24395 (3444) | 3444..4082 | - | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| MW404_RS24400 (4091) | 4091..4396 | - | 306 | WP_000224413.1 | hypothetical protein | - |
| MW404_RS24405 (4426) | 4426..5418 | - | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| MW404_RS24410 (5415) | 5415..6047 | - | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| MW404_RS24415 (6044) | 6044..6430 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| MW404_RS24420 (6427) | 6427..9054 | - | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| MW404_RS24425 (9214) | 9214..9435 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| MW404_RS24430 (9570) | 9570..10085 | - | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| MW404_RS24435 (10085) | 10085..10396 | - | 312 | WP_001057272.1 | conjugal transfer protein TrbD | - |
| MW404_RS24440 (10383) | 10383..10949 | - | 567 | WP_001617877.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| MW404_RS24445 (10939) | 10939..12390 | - | 1452 | WP_000146687.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| MW404_RS24450 (12390) | 12390..13118 | - | 729 | WP_001230808.1 | type-F conjugative transfer system secretin TraK | - |
| MW404_RS24455 (13105) | 13105..13671 | - | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| MW404_RS24460 (13693) | 13693..14004 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| MW404_RS24465 (14009) | 14009..14371 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| MW404_RS24470 (14405) | 14405..14632 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| MW404_RS24475 (14720) | 14720..15397 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| MW404_RS24480 (15531) | 15531..15914 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MW404_RS24485 (16245) | 16245..16847 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| MW404_RS24490 (17144) | 17144..17965 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| MW404_RS24495 (18084) | 18084..18371 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| MW404_RS24500 (18396) | 18396..18602 | - | 207 | WP_024261895.1 | hypothetical protein | - |
| MW404_RS24505 (18672) | 18672..18845 | + | 174 | Protein_26 | hypothetical protein | - |
| MW404_RS24510 (18843) | 18843..19073 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| MW404_RS24515 (19293) | 19293..19418 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| MW404_RS24520 (19360) | 19360..19509 | - | 150 | Protein_29 | plasmid maintenance protein Mok | - |
| - (19495) | 19495..19535 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (19495) | 19495..19535 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (19495) | 19495..19535 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (19495) | 19495..19535 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (20979) | 20979..21165 | - | 187 | NuclAT_0 | - | - |
| - (20979) | 20979..21165 | - | 187 | NuclAT_0 | - | - |
| - (20979) | 20979..21165 | - | 187 | NuclAT_0 | - | - |
| - (20979) | 20979..21165 | - | 187 | NuclAT_0 | - | - |
| MW404_RS24530 (21134) | 21134..21896 | - | 763 | Protein_31 | plasmid SOS inhibition protein A | - |
| MW404_RS24535 (21893) | 21893..22327 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| MW404_RS24540 (22382) | 22382..24340 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| MW404_RS24545 (24406) | 24406..24639 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| MW404_RS24550 (24702) | 24702..25241 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| MW404_RS24555 (25267) | 25267..25473 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| MW404_RS24560 (25884) | 25884..26132 | - | 249 | WP_001553845.1 | hypothetical protein | - |
| MW404_RS24565 (26158) | 26158..26721 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| MW404_RS24570 (26769) | 26769..28130 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| MW404_RS24575 (28182) | 28182..28412 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| MW404_RS24580 (29447) | 29447..29638 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| MW404_RS24585 (29635) | 29635..30057 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| MW404_RS24590 (30104) | 30104..30529 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| MW404_RS24595 (30946) | 30946..31722 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| MW404_RS24600 (31773) | 31773..32291 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| MW404_RS24605 (32221) | 32221..32442 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| MW404_RS24610 (32443) | 32443..33126 | - | 684 | WP_000086185.1 | DNA methylase | - |
| MW404_RS24615 (33203) | 33203..33514 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| MW404_RS24620 (33511) | 33511..34413 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| MW404_RS24625 (35280) | 35280..36251 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| MW404_RS24630 (36251) | 36251..37417 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| MW404_RS24635 (38005) | 38005..38760 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| MW404_RS24640 (39534) | 39534..40340 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| MW404_RS24645 (40341) | 40341..40646 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| MW404_RS24650 (40648) | 40648..40866 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| MW404_RS24655 (41574) | 41574..42569 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| MW404_RS24660 (42573) | 42573..43505 | + | 933 | WP_000991832.1 | S-4TM family putative pore-forming effector | - |
| MW404_RS24670 (44596) | 44596..44817 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| MW404_RS24675 (44817) | 44817..45197 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| MW404_RS24680 (45202) | 45202..45381 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| MW404_RS24685 (45409) | 45409..45687 | + | 279 | Protein_62 | pdcB | - |
| MW404_RS24690 (45692) | 45692..46105 | + | 414 | Protein_63 | IS3 family transposase ISLad1 | Transposase |
| MW404_RS24695 (46055) | 46055..46390 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| MW404_RS24700 (46600) | 46600..47580 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| MW404_RS24705 (47824) | 47824..49227 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| MW404_RS24710 (49214) | 49214..50146 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| MW404_RS24715 (50255) | 50255..50584 | - | 330 | Protein_68 | TOBE domain-containing protein | - |
| MW404_RS24725 (51376) | 51376..51603 | + | 228 | WP_013023899.1 | abortive infection family protein | - |
| MW404_RS24730 (51762) | 51762..52733 | - | 972 | Protein_71 | hypothetical protein | - |
| MW404_RS24735 (53489) | 53489..54466 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| MW404_RS24740 (54751) | 54751..55491 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| MW404_RS24745 (55612) | 55612..55800 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| MW404_RS24750 (56167) | 56167..57336 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| MW404_RS24755 (57562) | 57562..57737 | - | 176 | Protein_76 | IS3 family transposase | - |
| MW404_RS24760 (58183) | 58183..58455 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| MW404_RS24765 (58983) | 58983..59266 | - | 284 | Protein_78 | IS3 family transposase | - |
| MW404_RS24770 (59318) | 59318..60022 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| MW404_RS24775 (60321) | 60321..61181 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| MW404_RS24780 (61331) | 61331..61429 | - | 99 | Protein_81 | IS1 family transposase | - |
| MW404_RS24785 (61458) | 61458..62768 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| MW404_RS24790 (63053) | 63053..63454 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| MW404_RS24795 (63387) | 63387..63644 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| MW404_RS24800 (63737) | 63737..64390 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| MW404_RS24805 (65331) | 65331..66188 | - | 858 | WP_162758310.1 | incFII family plasmid replication initiator RepA | - |
| MW404_RS24810 (66181) | 66181..66255 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| MW404_RS24815 (66255) | 66255..66386 | - | 132 | Protein_88 | protein CopA/IncA | - |
| MW404_RS24820 (66492) | 66492..66746 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| MW404_RS24825 (67043) | 67043..67177 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (67222) | 67222..67282 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (67222) | 67222..67282 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (67222) | 67222..67282 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (67222) | 67222..67282 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| MW404_RS24830 (67249) | 67249..67535 | - | 287 | Protein_91 | DUF2726 domain-containing protein | - |
| MW404_RS24835 (67613) | 67613..67887 | - | 275 | WP_141072115.1 | IS66 family transposase IS682 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|