MGE detailed information
MGE type: Prophage MGE length: 38699 bp
Accession: NZ_CP092627 Location: 2045977..2084675 Organism: Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011657 Replicon: chromosome
Accession: NZ_CP092627 Location: 2045977..2084675 Organism: Salmonella enterica subsp. enterica serovar Thompson strain MFDS1011657 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ899_RS10005 () | 2042250..2042891 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| MJ899_RS10010 () | 2042991..2044169 | - | 1179 | WP_000173419.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| MJ899_RS10015 () | 2044300..2044590 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| MJ899_RS10020 () | 2044658..2045011 | + | 354 | WP_001042123.1 | protein YebF | - |
| MJ899_RS10025 () | 2045105..2045764 | + | 660 | WP_000024707.1 | tellurite resistance TerB family protein | - |
| MJ899_RS10030 () | 2045977..2048028 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| MJ899_RS10035 () | 2048065..2048763 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| MJ899_RS10040 () | 2048787..2049443 | - | 657 | WP_000100249.1 | carbon-nitrogen hydrolase family protein | - |
| MJ899_RS10045 () | 2049551..2049781 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| MJ899_RS10050 () | 2049919..2050293 | + | 375 | WP_022544651.1 | CopC domain-containing protein YobA | - |
| MJ899_RS10055 () | 2050294..2051169 | + | 876 | WP_017466156.1 | copper homeostasis membrane protein CopD | - |
| MJ899_RS10060 () | 2051186..2051539 | + | 354 | WP_017466155.1 | YebY family protein | - |
| - | 2051639..2051784 | - | 146 | - | - | Antitoxin Detail |
| - | 2051679..2051782 | + | 104 | - | - | Toxin Detail |
| MJ899_RS10065 () | 2051922..2053001 | - | 1080 | WP_017466154.1 | hypothetical protein ; Integrase | Integrase |
| MJ899_RS10070 () | 2053034..2054185 | - | 1152 | Protein_1967 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| MJ899_RS10075 () | 2054174..2054365 | + | 192 | Protein_1968 | glycoside hydrolase family 19 protein | - |
| MJ899_RS10080 () | 2054419..2054952 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| MJ899_RS10085 () | 2055209..2055376 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| MJ899_RS10090 () | 2055684..2055944 | + | 261 | Protein_1971 | DUF1441 family protein | - |
| MJ899_RS10095 () | 2055946..2056161 | + | 216 | Protein_1972 | shikimate transporter | - |
| MJ899_RS10100 () | 2056159..2056503 | + | 345 | Protein_1973 | macro domain-containing protein | - |
| MJ899_RS10105 () | 2056513..2056983 | + | 471 | Protein_1974 | tail fiber assembly protein | - |
| MJ899_RS10110 () | 2057080..2057280 | - | 201 | WP_031608121.1 | PagK family vesicle-borne virulence factor | - |
| MJ899_RS10115 () | 2057683..2057848 | - | 166 | Protein_1976 | IS3 family transposase | - |
| MJ899_RS10120 () | 2057848..2057973 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| MJ899_RS10125 () | 2058487..2058633 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| MJ899_RS10130 () | 2058627..2058794 | + | 168 | WP_269465034.1 | helix-turn-helix domain-containing protein | - |
| MJ899_RS10135 () | 2059121..2059735 | - | 615 | WP_017466152.1 | disulfide bond formation protein B | - |
| MJ899_RS10140 () | 2059745..2059903 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| MJ899_RS10145 () | 2060036..2060950 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| MJ899_RS10150 () | 2062034..2062456 | - | 423 | Protein_1983 | tyrosine-type recombinase/integrase | - |
| MJ899_RS10155 () | 2062526..2063720 | + | 1195 | Protein_1984 | IS256 family transposase IS285 | Transposase |
| MJ899_RS10160 () | 2063866..2064006 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| MJ899_RS10165 () | 2064172..2064441 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| MJ899_RS10170 () | 2064811..2065230 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| MJ899_RS10175 () | 2065603..2066079 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| MJ899_RS10180 () | 2066409..2066804 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| MJ899_RS10185 () | 2067488..2068210 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| MJ899_RS10190 () | 2068495..2068659 | + | 165 | WP_001134856.1 | membrane protein | - |
| MJ899_RS10195 () | 2068883..2069533 | + | 651 | WP_017465643.1 | protein-serine/threonine phosphatase | - |
| MJ899_RS10200 () | 2069552..2069743 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| MJ899_RS10205 () | 2069854..2070090 | - | 237 | WP_024131108.1 | YebV family protein | - |
| MJ899_RS10210 () | 2070208..2071647 | - | 1440 | WP_024137249.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| MJ899_RS10215 () | 2071725..2074358 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| MJ899_RS10220 () | 2074327..2075610 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| MJ899_RS10225 () | 2075739..2076236 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| MJ899_RS10230 () | 2076334..2077020 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| MJ899_RS10235 () | 2077040..2079088 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| MJ899_RS10240 () | 2079282..2080163 | + | 882 | WP_000984498.1 | protease HtpX | - |
| MJ899_RS10245 () | 2080211..2081584 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| MJ899_RS10250 () | 2081760..2082551 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| MJ899_RS10255 () | 2082763..2083002 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| MJ899_RS10260 () | 2083160..2083303 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| MJ899_RS10265 () | 2083374..2083661 | + | 288 | WP_001000660.1 | YebO family protein | - |
| MJ899_RS10270 () | 2084310..2084453 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| MJ899_RS10275 () | 2084466..2084675 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| MJ899_RS10280 () | 2084895..2086640 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| MJ899_RS10285 () | 2086706..2087515 | + | 810 | WP_017465645.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| MJ899_RS10290 () | 2087512..2088078 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| MJ899_RS10295 () | 2088488..2088946 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.006 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.006 |