MGE detailed information
MGE type: Prophage MGE length: 21675 bp
Accession: NZ_CP092037 Location: 1293781..1315455 Organism: Escherichia coli strain MG1655-377GD Replicon: chromosome
Accession: NZ_CP092037 Location: 1293781..1315455 Organism: Escherichia coli strain MG1655-377GD Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MBA16_RS06335 (1290147) | 1290147..1291457 | - | 1311 | WP_000444929.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| MBA16_RS06340 (1291638) | 1291638..1291868 | - | 231 | Protein_1229 | diguanylate cyclase | - |
| MBA16_RS06345 (1292080) | 1292080..1292127 | + | 48 | WP_211180494.1 | protein YnaN | - |
| MBA16_RS21000 (1292141) | 1292141..1292464 | + | 324 | Protein_1231 | DEAD/DEAH box helicase | - |
| MBA16_RS06360 (1292471) | 1292471..1292665 | + | 195 | Protein_1232 | DbpA RNA binding domain-containing protein | - |
| MBA16_RS06365 (1292794) | 1292794..1293729 | - | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| MBA16_RS06370 (1293781) | 1293781..1295016 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| MBA16_RS06375 (1295018) | 1295018..1295233 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1295337) | 1295337..1295515 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1295337) | 1295337..1295515 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1295337) | 1295337..1295515 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1295337) | 1295337..1295515 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| MBA16_RS06380 (1295312) | 1295312..1295521 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| MBA16_RS06385 (1295514) | 1295514..1295708 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| MBA16_RS06390 (1295765) | 1295765..1296574 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| MBA16_RS06395 (1296567) | 1296567..1299167 | - | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| MBA16_RS06400 (1299269) | 1299269..1299544 | - | 276 | WP_000632297.1 | protein RacC | - |
| MBA16_RS06405 (1299619) | 1299619..1299789 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| MBA16_RS06410 (1299789) | 1299789..1300010 | - | 222 | WP_000560225.1 | killing protein KilR | - |
| MBA16_RS06415 (1300452) | 1300452..1300940 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| MBA16_RS06420 (1300937) | 1300937..1301092 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| MBA16_RS21005 (1301103) | 1301103..1301237 | - | 135 | WP_000233809.1 | phage protein | - |
| MBA16_RS06425 (1301546) | 1301546..1302022 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| MBA16_RS06430 (1302146) | 1302146..1302442 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| MBA16_RS06435 (1302465) | 1302465..1302887 | + | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| MBA16_RS06440 (1302900) | 1302900..1303757 | + | 858 | WP_000899748.1 | YdaU family protein | - |
| MBA16_RS06445 (1303764) | 1303764..1304510 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| MBA16_RS06450 (1304533) | 1304533..1304985 | + | 453 | Protein_1251 | DUF1627 domain-containing protein | - |
| MBA16_RS21010 (1305181) | 1305181..1305366 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| MBA16_RS06465 (1305563) | 1305563..1307020 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| MBA16_RS06470 (1307158) | 1307158..1307421 | + | 264 | WP_001350510.1 | ParB/Srx family N-terminal domain-containing protein | - |
| MBA16_RS06475 (1307402) | 1307402..1307761 | + | 360 | WP_000091628.1 | protein YdaY | - |
| MBA16_RS06480 (1308235) | 1308235..1309167 | + | 933 | Protein_1256 | phage tail length tape measure family protein | - |
| MBA16_RS06485 (1309170) | 1309170..1309385 | + | 216 | Protein_1257 | Ail/Lom family outer membrane beta-barrel protein | - |
| MBA16_RS06490 (1309527) | 1309527..1310507 | - | 981 | WP_000019448.1 | IS5 family transposase ISKpn26 | Transposase |
| MBA16_RS06495 (1310577) | 1310577..1310765 | + | 189 | Protein_1259 | Ail/Lom family outer membrane beta-barrel protein | - |
| MBA16_RS06500 (1310830) | 1310830..1314192 | + | 3363 | WP_000279097.1 | prophage tail fiber N-terminal domain-containing protein | - |
| MBA16_RS06505 (1314192) | 1314192..1314767 | + | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| MBA16_RS06510 (1314865) | 1314865..1315455 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| MBA16_RS06515 (1315972) | 1315972..1316214 | - | 243 | Protein_1263 | porin | - |
| MBA16_RS06520 (1316212) | 1316212..1317282 | - | 1071 | Protein_1264 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| MBA16_RS06525 (1317282) | 1317282..1317440 | - | 159 | Protein_1265 | heat-inducible protein | - |
| MBA16_RS06530 (1317491) | 1317491..1318231 | + | 741 | Protein_1266 | YdbH domain-containing protein | - |
| MBA16_RS06535 (1318228) | 1318228..1318413 | + | 186 | WP_000698145.1 | YnbE family lipoprotein | - |
| MBA16_RS06540 (1318421) | 1318421..1318747 | + | 327 | WP_001300734.1 | YdbL family protein | - |
| MBA16_RS06545 (1318803) | 1318803..1319048 | - | 246 | Protein_1269 | primary-amine oxidase | - |
| MBA16_RS06550 (1319050) | 1319050..1319394 | - | 345 | Protein_1270 | aldehyde dehydrogenase family protein | - |
| MBA16_RS06555 (1319370) | 1319370..1319468 | + | 99 | Protein_1271 | phenylacetate-CoA ligase | - |
| MBA16_RS06560 (1319468) | 1319468..1319794 | + | 327 | Protein_1272 | phenylacetic acid degradation operon negative regulatory protein PaaX | - |
| MBA16_RS06565 (1319794) | 1319794..1320078 | + | 285 | WP_238522720.1 | hypothetical protein | - |
| MBA16_RS06570 (1320066) | 1320066..1320233 | + | 168 | Protein_1274 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20020 | CP009789 | 1385172..1414104 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 | Prophage | TA20061 | HG738867 | 1300529..1322203 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Prophage | TA6362 | NC_000913 | 1412000..1433674 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21432 | NC_007779 | 1413714..1435388 | 0 | |
| Escherichia coli str. K-12 substr. DH10B | Prophage | TA22680 | NC_010473 | 1499420..1521094 | 0 | |
| Escherichia coli BW2952 | Prophage | TA23848 | NC_012759 | 1302083..1323757 | 0 | |
| Escherichia coli DH1 | Prophage | TA27398 | NC_017638 | 1394182..1415856 | 0 | |
| Escherichia coli BW25113 | Prophage | TA48677 | NZ_CP009273 | 1406257..1427931 | 0 | |
| Escherichia coli strain DH5alpha | Prophage | TA90473 | NZ_CP025520 | 269442..291116 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Prophage | TA285012 | NZ_HG738867 | 1300529..1322203 | 0 |