MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100940 bp
Accession: NZ_CP091705 Location: 1..100940 Organism: Escherichia coli strain KGu016 Replicon: plasmid pKGu016_1
Accession: NZ_CP091705 Location: 1..100940 Organism: Escherichia coli strain KGu016 Replicon: plasmid pKGu016_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L59_RS24625 (1301) | 1301..2041 | - | 741 | WP_016238487.1 | tyrosine-type recombinase/integrase | - |
| L6L59_RS24630 (2411) | 2411..2700 | - | 290 | Protein_2 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| L6L59_RS24635 (2687) | 2687..2955 | - | 269 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| L6L59_RS24640 (3487) | 3487..4656 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| L6L59_RS24645 (4689) | 4689..4817 | + | 129 | Protein_5 | IS481 family transposase | - |
| L6L59_RS24650 (4942) | 4942..5145 | - | 204 | Protein_6 | hypothetical protein | - |
| L6L59_RS24655 (5251) | 5251..5526 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L6L59_RS24660 (5526) | 5526..5810 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| L6L59_RS24665 (6415) | 6415..7167 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| L6L59_RS24670 (7213) | 7213..8178 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| L6L59_RS24675 (8211) | 8211..8591 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| L6L59_RS24680 (8616) | 8616..9506 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| L6L59_RS24685 (9739) | 9739..9933 | - | 195 | WP_000796505.1 | hypothetical protein | - |
| L6L59_RS24690 (9907) | 9907..10347 | + | 441 | Protein_14 | zinc-binding dehydrogenase | - |
| L6L59_RS24695 (10478) | 10478..11356 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| L6L59_RS24700 (11346) | 11346..12233 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| L6L59_RS24705 (12244) | 12244..13068 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| L6L59_RS24710 (13074) | 13074..14147 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| L6L59_RS24715 (14140) | 14140..15450 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| L6L59_RS24720 (15509) | 15509..15817 | - | 309 | Protein_20 | IS4 family transposase ISEc13 | Transposase |
| L6L59_RS24725 (15894) | 15894..16067 | - | 174 | WP_000338295.1 | Tn3 family transposase ISPsy39 | Transposase |
| L6L59_RS24730 (16149) | 16149..16629 | - | 481 | Protein_22 | IS3 family transposase IS629 | Transposase |
| L6L59_RS24735 (16713) | 16713..18221 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| L6L59_RS24740 (18894) | 18894..19615 | - | 722 | Protein_24 | IS3 family transposase IS629 | Transposase |
| L6L59_RS24745 (19640) | 19640..20344 | + | 705 | WP_001067834.1 | IS6 family transposase IS26 | Transposase |
| L6L59_RS24750 (20402) | 20402..20932 | - | 531 | Protein_26 | histidine-type phosphatase | - |
| L6L59_RS24755 (21054) | 21054..21539 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| L6L59_RS24760 (21564) | 21564..22049 | - | 486 | WP_001267177.1 | TlpA disulfide reductase family protein | - |
| L6L59_RS24765 (22036) | 22036..22731 | - | 696 | WP_240755575.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| L6L59_RS24770 (22736) | 22736..23866 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| L6L59_RS24775 (23856) | 23856..25139 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| L6L59_RS24780 (25142) | 25142..26521 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| L6L59_RS24785 (26625) | 26625..27152 | - | 528 | WP_000178050.1 | iron transporter | - |
| L6L59_RS24790 (27193) | 27193..29079 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| L6L59_RS24795 (29426) | 29426..30187 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| L6L59_RS24800 (30424) | 30424..30930 | - | 507 | WP_080177532.1 | protein disulfide oxidoreductase | - |
| L6L59_RS24805 (30920) | 30920..31090 | - | 171 | Protein_37 | DsbA family protein | - |
| L6L59_RS24810 (31228) | 31228..31341 | - | 114 | Protein_38 | IS6 family transposase | - |
| L6L59_RS24815 (31541) | 31541..32238 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| L6L59_RS24820 (32256) | 32256..33128 | + | 873 | Protein_40 | IS4 family transposase IS10R | Transposase |
| L6L59_RS24825 (33138) | 33138..33554 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| L6L59_RS24830 (33642) | 33642..34235 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| L6L59_RS24835 (34348) | 34348..35553 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| L6L59_RS24840 (35635) | 35635..36258 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| L6L59_RS24845 (36236) | 36236..36922 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| L6L59_RS24850 (36930) | 36930..37316 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| L6L59_RS24855 (37309) | 37309..37572 | - | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| L6L59_RS24865 (38295) | 38295..39605 | - | 1311 | WP_240755577.1 | DUF262 domain-containing protein | - |
| L6L59_RS24870 (39890) | 39890..40291 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| L6L59_RS24875 (40224) | 40224..40481 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| L6L59_RS24880 (40574) | 40574..41227 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| L6L59_RS24885 (41325) | 41325..41465 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| L6L59_RS24890 (42166) | 42166..43014 | - | 849 | WP_139471275.1 | incFII family plasmid replication initiator RepA | - |
| L6L59_RS24895 (43007) | 43007..43081 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| L6L59_RS24905 (43318) | 43318..43572 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| L6L59_RS24910 (43869) | 43869..44003 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (44048) | 44048..44108 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44048) | 44048..44108 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44048) | 44048..44108 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (44048) | 44048..44108 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| L6L59_RS24915 (44075) | 44075..44361 | - | 287 | Protein_58 | DUF2726 domain-containing protein | - |
| L6L59_RS24920 (44874) | 44874..45086 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| L6L59_RS24925 (45217) | 45217..45777 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| L6L59_RS24930 (45832) | 45832..46578 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| L6L59_RS24935 (46598) | 46598..51868 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| L6L59_RS24940 (51868) | 51868..54084 | - | 2217 | WP_023356304.1 | type IV conjugative transfer system coupling protein TraD | - |
| L6L59_RS24945 (54081) | 54081..54860 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| L6L59_RS24950 (55063) | 55063..55794 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| L6L59_RS24955 (55826) | 55826..56323 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| L6L59_RS24960 (56342) | 56342..59161 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| L6L59_RS24965 (59158) | 59158..60531 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| L6L59_RS24970 (60518) | 60518..60910 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| L6L59_RS24975 (60891) | 60891..61238 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| L6L59_RS24980 (61168) | 61168..61713 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| L6L59_RS24985 (61700) | 61700..61984 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L6L59_RS24990 (62111) | 62111..62431 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| L6L59_RS25000 (63413) | 63413..63700 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| L6L59_RS25005 (63725) | 63725..63931 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| L6L59_RS25010 (64001) | 64001..64174 | + | 174 | Protein_77 | hypothetical protein | - |
| L6L59_RS25015 (64903) | 64903..66570 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| L6L59_RS25020 (66683) | 66683..66847 | + | 165 | Protein_79 | hypothetical protein | - |
| L6L59_RS25025 (66933) | 66933..67496 | - | 564 | WP_012881140.1 | class I SAM-dependent methyltransferase | - |
| L6L59_RS25030 (67543) | 67543..68904 | - | 1362 | WP_012917672.1 | DUF3560 domain-containing protein | - |
| L6L59_RS25035 (68956) | 68956..69186 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| L6L59_RS25040 (69699) | 69699..69853 | + | 155 | Protein_83 | hypothetical protein | - |
| L6L59_RS25045 (70582) | 70582..72249 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| L6L59_RS25050 (72566) | 72566..72757 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| L6L59_RS25055 (72754) | 72754..73176 | - | 423 | WP_012917670.1 | DUF1380 family protein | - |
| L6L59_RS25060 (73223) | 73223..73648 | - | 426 | WP_001198895.1 | antirestriction protein | - |
| L6L59_RS25065 (74064) | 74064..74840 | - | 777 | WP_025999342.1 | hypothetical protein | - |
| L6L59_RS25070 (74891) | 74891..75325 | - | 435 | WP_012917669.1 | DUF1380 family protein | - |
| L6L59_RS25075 (75339) | 75339..75560 | - | 222 | WP_012881148.1 | hypothetical protein | - |
| L6L59_RS25080 (75561) | 75561..76244 | - | 684 | WP_050008524.1 | DNA methylase | - |
| L6L59_RS25085 (76321) | 76321..76632 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| L6L59_RS25090 (76629) | 76629..77531 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| L6L59_RS25095 (78398) | 78398..79369 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| L6L59_RS25100 (79369) | 79369..80535 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| L6L59_RS25105 (81123) | 81123..81878 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| L6L59_RS25110 (82652) | 82652..83434 | - | 783 | WP_072644413.1 | site-specific integrase | - |
| L6L59_RS25115 (83435) | 83435..83740 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| L6L59_RS25120 (83742) | 83742..83960 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| L6L59_RS25125 (84668) | 84668..85663 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| L6L59_RS25130 (85667) | 85667..86599 | + | 933 | WP_000991831.1 | S-4TM family putative pore-forming effector | - |
| L6L59_RS25135 (86897) | 86897..87985 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| L6L59_RS25140 (87978) | 87978..88856 | + | 879 | WP_225522546.1 | hypothetical protein | - |
| L6L59_RS25145 (88913) | 88913..90121 | - | 1209 | WP_240755571.1 | AAA family ATPase | - |
| L6L59_RS25155 (91468) | 91468..91791 | - | 324 | WP_240755573.1 | AAA family ATPase | - |
| L6L59_RS25160 (92102) | 92102..92590 | + | 489 | WP_024190173.1 | hypothetical protein | - |
| L6L59_RS25165 (92624) | 92624..93757 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| L6L59_RS25170 (93924) | 93924..94313 | - | 390 | WP_001403960.1 | hypothetical protein | - |
| L6L59_RS25175 (94259) | 94259..94696 | - | 438 | WP_016238492.1 | hypothetical protein | - |
| L6L59_RS25180 (94709) | 94709..95210 | - | 502 | Protein_111 | HEPN family nuclease | - |
| L6L59_RS25185 (95601) | 95601..98222 | + | 2622 | WP_016238490.1 | hypothetical protein | - |
| L6L59_RS25190 (98421) | 98421..98651 | + | 231 | WP_016238489.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| L6L59_RS25195 (98648) | 98648..98964 | + | 317 | Protein_114 | type II toxin-antitoxin system VapC family toxin | - |
| L6L59_RS25200 (99020) | 99020..99237 | - | 218 | Protein_115 | transposase | - |
| L6L59_RS25205 (99238) | 99238..99768 | - | 531 | WP_000348884.1 | GNAT family N-acetyltransferase | - |
| L6L59_RS25210 (99772) | 99772..100041 | - | 270 | WP_016238488.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|