MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86532 bp
Accession: NZ_CP091685 Location: 1..86532 Organism: Escherichia coli strain KKo003 Replicon: plasmid pKKo003_2
Accession: NZ_CP091685 Location: 1..86532 Organism: Escherichia coli strain KKo003 Replicon: plasmid pKKo003_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L54_RS24745 (L6L54_24745) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| L6L54_RS24750 (L6L54_24750) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| L6L54_RS24755 (L6L54_24755) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| L6L54_RS24760 (L6L54_24760) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| L6L54_RS24765 (L6L54_24765) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| L6L54_RS24770 (L6L54_24770) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| L6L54_RS24775 (L6L54_24775) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| L6L54_RS24780 (L6L54_24780) | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| L6L54_RS24785 (L6L54_24785) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| L6L54_RS24790 (L6L54_24790) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| L6L54_RS24795 (L6L54_24795) | 9717..10499 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| L6L54_RS24800 (L6L54_24800) | 10496..11518 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| L6L54_RS24805 (L6L54_24805) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| L6L54_RS24810 (L6L54_24810) | 12598..12945 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| L6L54_RS24815 (L6L54_24815) | 12942..13346 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| L6L54_RS24820 (L6L54_24820) | 13426..13764 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| L6L54_RS24825 (L6L54_24825) | 13848..15356 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| L6L54_RS24830 (L6L54_24830) | 16029..16768 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| L6L54_RS24835 (L6L54_24835) | 16794..17099 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| L6L54_RS24840 (L6L54_24840) | 17622..18797 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| L6L54_RS24845 (L6L54_24845) | 18866..21127 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| L6L54_RS24850 (L6L54_24850) | 21296..22072 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| L6L54_RS24855 (L6L54_24855) | 22080..22955 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| L6L54_RS24860 (L6L54_24860) | 23287..23973 | - | 687 | Protein_23 | replication initiation protein | - |
| L6L54_RS24865 (L6L54_24865) | 25425..25760 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| L6L54_RS24870 (L6L54_24870) | 25889..26236 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| L6L54_RS24875 (L6L54_24875) | 26256..26765 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| L6L54_RS24880 (L6L54_24880) | 26762..27022 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| L6L54_RS24885 (L6L54_24885) | 27124..27863 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| L6L54_RS24890 (L6L54_24890) | 28536..28850 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| L6L54_RS24895 (L6L54_24895) | 28851..29024 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| L6L54_RS24900 (L6L54_24900) | 29174..29807 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| L6L54_RS24905 (L6L54_24905) | 29929..30414 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| L6L54_RS24910 (L6L54_24910) | 30439..30924 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| L6L54_RS24915 (L6L54_24915) | 30911..31606 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| L6L54_RS24920 (L6L54_24920) | 31611..32741 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| L6L54_RS24925 (L6L54_24925) | 32731..34014 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| L6L54_RS24930 (L6L54_24930) | 34017..35396 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| L6L54_RS24935 (L6L54_24935) | 35500..36027 | - | 528 | WP_000178050.1 | iron transporter | - |
| L6L54_RS24940 (L6L54_24940) | 36068..37954 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| L6L54_RS24945 (L6L54_24945) | 38301..39062 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| L6L54_RS24950 (L6L54_24950) | 39299..39805 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| L6L54_RS24955 (L6L54_24955) | 39795..39965 | - | 171 | Protein_42 | DsbA family protein | - |
| L6L54_RS24960 (L6L54_24960) | 40103..40216 | - | 114 | Protein_43 | IS6 family transposase | - |
| L6L54_RS24965 (L6L54_24965) | 40416..41113 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| L6L54_RS24970 (L6L54_24970) | 41128..41346 | + | 219 | Protein_45 | IS4 family transposase | - |
| L6L54_RS24975 (L6L54_24975) | 41396..42100 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L6L54_RS24980 (L6L54_24980) | 42161..42337 | + | 177 | Protein_47 | replication protein C, IncQ-type | - |
| L6L54_RS24985 (L6L54_24985) | 42645..43460 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| L6L54_RS24990 (L6L54_24990) | 43521..44324 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| L6L54_RS24995 (L6L54_24995) | 44324..45160 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| L6L54_RS25000 (L6L54_25000) | 45214..45450 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| L6L54_RS25005 (L6L54_25005) | 45482..46108 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| L6L54_RS25010 (L6L54_25010) | 46214..47413 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| L6L54_RS25015 (L6L54_25015) | 47445..48305 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| L6L54_RS25020 (L6L54_25020) | 48314..48820 | - | 507 | Protein_55 | DNA-binding domain-containing protein | - |
| L6L54_RS25025 (L6L54_25025) | 48873..49577 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L6L54_RS25030 (L6L54_25030) | 49876..50736 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| L6L54_RS25035 (L6L54_25035) | 50886..50984 | - | 99 | Protein_58 | IS1 family transposase | - |
| L6L54_RS25040 (L6L54_25040) | 51013..52323 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| L6L54_RS25045 (L6L54_25045) | 52608..53009 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| L6L54_RS25050 (L6L54_25050) | 52942..53199 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| L6L54_RS25055 (L6L54_25055) | 53292..53945 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| L6L54_RS25060 (L6L54_25060) | 54408..54947 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| L6L54_RS25065 (L6L54_25065) | 54973..55179 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| L6L54_RS25070 (L6L54_25070) | 55420..55677 | - | 258 | WP_023147917.1 | hypothetical protein | - |
| L6L54_RS25075 (L6L54_25075) | 55590..55802 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| L6L54_RS25080 (L6L54_25080) | 55828..56391 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| L6L54_RS25085 (L6L54_25085) | 56439..57800 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| L6L54_RS25090 (L6L54_25090) | 57852..58082 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| L6L54_RS25095 (L6L54_25095) | 59117..59308 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| L6L54_RS25100 (L6L54_25100) | 59305..59727 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| L6L54_RS25105 (L6L54_25105) | 59774..60199 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| L6L54_RS25110 (L6L54_25110) | 60616..61392 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| L6L54_RS25115 (L6L54_25115) | 61443..61961 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| L6L54_RS25120 (L6L54_25120) | 61891..62112 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| L6L54_RS25125 (L6L54_25125) | 62113..62796 | - | 684 | WP_000086185.1 | DNA methylase | - |
| L6L54_RS25130 (L6L54_25130) | 62873..63184 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| L6L54_RS25135 (L6L54_25135) | 63181..64083 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| L6L54_RS25140 (L6L54_25140) | 64950..65921 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| L6L54_RS25145 (L6L54_25145) | 65921..67087 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| L6L54_RS25150 (L6L54_25150) | 67675..68430 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| L6L54_RS25155 (L6L54_25155) | 69204..70010 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| L6L54_RS25160 (L6L54_25160) | 70011..70316 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| L6L54_RS25165 (L6L54_25165) | 70318..70536 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| L6L54_RS25170 (L6L54_25170) | 71103..71615 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| L6L54_RS25175 (L6L54_25175) | 71649..72782 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| L6L54_RS25180 (L6L54_25180) | 72949..73722 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| L6L54_RS25185 (L6L54_25185) | 73735..74235 | - | 501 | WP_001773886.1 | HEPN family nuclease | - |
| L6L54_RS25190 (L6L54_25190) | 74500..74730 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| L6L54_RS25195 (L6L54_25195) | 74727..75143 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L6L54_RS25200 (L6L54_25200) | 75188..78982 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| L6L54_RS25205 (L6L54_25205) | 79363..79593 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| L6L54_RS25210 (L6L54_25210) | 79590..80006 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| L6L54_RS25215 (L6L54_25215) | 80081..81646 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| L6L54_RS25220 (L6L54_25220) | 81631..82653 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| L6L54_RS25230 (L6L54_25230) | 83907..84604 | + | 698 | WP_223155668.1 | IS1 family transposase IS1A | Transposase |
| L6L54_RS25235 (L6L54_25235) | 84784..85297 | - | 514 | Protein_98 | DUF4113 domain-containing protein | - |
| L6L54_RS25240 (L6L54_25240) | 85358..85462 | - | 105 | Protein_99 | AAA family ATPase | - |
| L6L54_RS25245 (L6L54_25245) | 85464..85787 | - | 324 | Protein_100 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|