NZ_CP091560877974..889299

MGE detailed information

MGE type: Genomic_island        MGE length: 11326 bp
Accession: NZ_CP091560        Location: 877974..889299         Organism: Salmonella enterica strain 179       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
INN78_RS04250 (873420) 873420..874518 + 1099 WP_010989230.1 peptide chain release factor 2 -
INN78_RS04255 (874528) 874528..876045 + 1518 WP_000003339.1 lysine--tRNA ligase -
INN78_RS04260 (876121) 876121..876666 - 546 WP_000133994.1 isopentenyl-diphosphate Delta-isomerase -
INN78_RS04265 (876931) 876931..877689 + 759 WP_000244329.1 amidase activator ActS -
INN78_RS04275 (877974) 877974..878780 - 807 WP_010989071.1 DUF1460 domain-containing protein -
INN78_RS04280 (879055) 879055..879306 - 252 WP_001540858.1 hypothetical protein -
INN78_RS04285 (879483) 879483..879710 + 228 WP_000557549.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
INN78_RS04290 (879710) 879710..880108 + 399 WP_000911336.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
INN78_RS04295 (880914) 880914..881450 + 537 WP_001038506.1 Attachment invasion locus protein VF
INN78_RS04300 (881497) 881497..882129 + 633 WP_000835265.1 YfdX family protein -
INN78_RS04305 (882848) 882848..883432 + 585 WP_001244638.1 putative fimbrial-like protein YbgD VF
INN78_RS04310 (883552) 883552..886041 + 2490 WP_000705483.1 Outer membrane usher protein PapC VF
INN78_RS04315 (886082) 886082..886825 + 744 WP_000798504.1 Chaperone protein PapD VF
INN78_RS04320 (886822) 886822..887898 + 1077 WP_000141329.1 outer membrane protein -
INN78_RS04325 (888042) 888042..888554 + 513 WP_000336259.1 CaiF/GrlA family transcriptional regulator -
INN78_RS04330 (888541) 888541..889299 + 759 WP_000134791.1 transcriptional regulator -
INN78_RS04335 (889509) 889509..890363 - 855 WP_000503685.1 nickel/cobalt efflux protein RcnA -
INN78_RS04340 (890485) 890485..890757 + 273 WP_000019953.1 Ni(II)/Co(II)-binding transcriptional repressor RcnR -
INN78_RS04345 (890788) 890788..892017 - 1230 WP_000036825.1 amino acid permease -
INN78_RS04350 (892159) 892159..892614 - 456 WP_001519547.1 multidrug/biocide efflux PACE transporter -
INN78_RS04355 (892718) 892718..893581 + 864 WP_001270766.1 LysR family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Genomic island TA439 NC_003197 3186004..3197296 0.004
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 Genomic island TA25956 NC_016810 3207430..3218010 0.002
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S Genomic island TA26056 NC_016856 3205849..3216429 0.002
Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 Genomic island TA297244 UFRD01000002 4451871..4463194 0